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The map label for this gene is mmpS5

Identifier: 121636598

GI number: 121636598

Start: 809886

End: 810314

Strand: Reverse

Name: mmpS5

Synonym: BCG_0726c

Alternate gene names: 121636598

Gene position: 810314-809886 (Counterclockwise)

Preceding gene: 121636600

Following gene: 121636597

Centisome position: 18.52

GC content: 61.54

Gene sequence:

>429_bases
ATGATTGGAACTCTCAAGCGTGCCTGGATACCGCTGCTCATCCTGGTTGTGGTCGCCATCGCCGGCTTCACGGTGCAGCG
GATCCGCACTTTCTTTGGTTCCGAAGGCATCTTGGTGACGCCGAAGGTCTTCGCCGATGACCCGGAGCCGTTCGACCCCA
AGGTGGTGGAGTACGAAGTTTCCGGCTCCGGTAGTTACGTCAACATCAACTACCTGGACCTCGACGCCAAGCCACAGCGG
ATCGACGGCGCAGCCCTGCCGTGGTCGCTCACCTTGAAGACCACGGCGCCGTCCGCGGCCCCCAACATCCTCGCGCAAGG
CGACGGCACTTCCATCACCTGCCGAATCACCGTCGATGGCGAAGTGAAGGACGAGCGGACCGCAACCGGCGTGGATGCCC
TGACCTACTGCTTTGTGAAATCCGCATGA

Upstream 100 bases:

>100_bases
CGTCGTTGACGCTCACAAGTTTCACTGTACTCTGAAATCTGTGACGTTCGGTATGCGTCACCAGACCGGCGTGAACTTCA
TGCGGCAGAGGCGGAGGGCG

Downstream 100 bases:

>100_bases
TCGTGCAAAGGACAGCTGCGCCGACGGGCTCCGTCCCGCCCGACAGGCACGCGGCGCGACCGTTCATCCCCAGAATGATC
CGTACCTTCGCGGTGCCGAT

Product: putative membrane protein mmpS5

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEVSGSGSYVNINYLDLDAKPQR
IDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDALTYCFVKSA

Sequences:

>Translated_142_residues
MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEVSGSGSYVNINYLDLDAKPQR
IDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDALTYCFVKSA
>Mature_142_residues
MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEVSGSGSYVNINYLDLDAKPQR
IDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDGEVKDERTATGVDALTYCFVKSA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MMPS5_MYCBO (P65381)

Other databases:

- EMBL:   BX248336
- RefSeq:   NP_854354.1
- EnsemblBacteria:   EBMYCT00000018119
- GeneID:   1091817
- GenomeReviews:   BX248333_GR
- KEGG:   mbo:Mb0696c
- GeneTree:   EBGT00050000015314
- HOGENOM:   HBG566824
- OMA:   DVNYLDL
- ProtClustDB:   CLSK790498
- BioCyc:   MBOV233413:MB0696C-MONOMER
- InterPro:   IPR008693

Pfam domain/function: PF05423 Mycobact_memb

EC number: NA

Molecular weight: Translated: 15249; Mature: 15249

Theoretical pI: Translated: 4.63; Mature: 4.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x146a0268)-;

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEV
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCEECCCCCCCCCEEEEEEE
SGSGSYVNINYLDLDAKPQRIDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDG
CCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEEEEECC
EVKDERTATGVDALTYCFVKSA
CCCCCCCCCCHHHEEEEEEECH
>Mature Secondary Structure
MIGTLKRAWIPLLILVVVAIAGFTVQRIRTFFGSEGILVTPKVFADDPEPFDPKVVEYEV
CCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCEEECCCEECCCCCCCCCEEEEEEE
SGSGSYVNINYLDLDAKPQRIDGAALPWSLTLKTTAPSAAPNILAQGDGTSITCRITVDG
CCCCCEEEEEEEECCCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCCEEEEEEEECC
EVKDERTATGVDALTYCFVKSA
CCCCCCCCCCHHHEEEEEEECH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972