Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636547
Identifier: 121636547
GI number: 121636547
Start: 749647
End: 750798
Strand: Reverse
Name: 121636547
Synonym: BCG_0674c
Alternate gene names: NA
Gene position: 750798-749647 (Counterclockwise)
Preceding gene: 121636548
Following gene: 121636544
Centisome position: 17.16
GC content: 72.14
Gene sequence:
>1152_bases GTGCGGATCGGAGTCGGGGTTTCCACCGCGCCGGACGTGCGCCGGGCCGCGGCGGAGGCTGCCGCGCACGCGCGCGAGGA GCTCGCGGGTGGGACGCCGGCGCTGGCCGTGCTCCTCGGATCGCGGTCACACACCGACCAGGCCGTGGACCTGCTGGCTG CGGTGCAGGCGTCGGTCGAGCCGGCCGCGCTGATCGGTTGCGTGGCCCAAGGCATCGTCGCCGGTCGCCACGAGCTGGAG AACGAGCCCGCGGTAGCGGTGTGGCTGGCGTCCGGCCCACCCGCGGAGACATTCCACCTGGACTTCGTTCGCACCGGCTC GGGCGCTCTGATCACCGGTTACCGCTTCGACCGGACCGCGCACGACTTGCACCTGCTGCTGCCGGACCCGTACTCGTTCC CGTCGAATCTGCTCATCGAGCACCTCAACACCGACCTGCCGGGAACGACCGTCGTCGGCGGGGTGGTGAGCGGTGGGCGT CGGCGGGGCGACACCCGGCTGTTTCGTGACCGCGACGTGCTCACCTCCGGGCTGGTCGGCGTGCGCCTGCCCGGCGCGCA CAGCGTTTCCGTGGTGTCGCAGGGCTGCCGGCCGATCGGGGAACCGTACATTGTCACCGGCGCGGACGGTGCCGTGATCA CCGAGCTGGGCGGCCGACCGCCGCTGCACCGCCTGCGGGAGATCGTCTTGGGGATGGCGCCCGACGAGCAGGAACTGGTC AGCCGCGGCCTGCAGATCGGAATCGTCGTCGACGAGCACCTGGCGGTGCCGGGTCAGGGCGACTTTTTGATCCGCGGGCT GCTCGGCGCCGACCCAACGACGGGGGCGATCGGGATCGGCGAGGTTGTCGAGGTCGGCGCGACCGTGCAATTCCAGGTCC GGGACGCGGCGGCGGCCGACAAGGACCTGCGCCTGGCCGTCGAGCGGGCGGCGGCGGAGCTGCCCGGGCCCCCGGTCGGT GGGCTGCTGTTCACCTGCAACGGGCGCGGACGACGAATGTTCGGGGTCACCGACCACGACGCGTCGACGATCGAGGACCT GCTGGGCGGGATTCCGCTGGCCGGTTTCTTCGCCGCCGGGGAGATCGGCCCGGTCGCGGGCCACAACGCGTTGCACGGGT TTACCGCGTCGATGGCGCTGTTCGTCGACTGA
Upstream 100 bases:
>100_bases GTGGCTGACTCGTCGGGGATGTGCTCGGCTCGTCGGGTAACCGCGCCCGGACTTTGACATCGCATACACGAACAGCACGG CGACGGCGCATCATGGATGT
Downstream 100 bases:
>100_bases GGCCGCCGCGTTGACCCACCGGGACGCCCTGCGGGTGCGGACAACAGCGCGAGAGACGCGTGGCCACCGAGTCAGACCCG AATGATCTCCACACTGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 383; Mature: 383
Protein sequence:
>383_residues MRIGVGVSTAPDVRRAAAEAAAHAREELAGGTPALAVLLGSRSHTDQAVDLLAAVQASVEPAALIGCVAQGIVAGRHELE NEPAVAVWLASGPPAETFHLDFVRTGSGALITGYRFDRTAHDLHLLLPDPYSFPSNLLIEHLNTDLPGTTVVGGVVSGGR RRGDTRLFRDRDVLTSGLVGVRLPGAHSVSVVSQGCRPIGEPYIVTGADGAVITELGGRPPLHRLREIVLGMAPDEQELV SRGLQIGIVVDEHLAVPGQGDFLIRGLLGADPTTGAIGIGEVVEVGATVQFQVRDAAAADKDLRLAVERAAAELPGPPVG GLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAGEIGPVAGHNALHGFTASMALFVD
Sequences:
>Translated_383_residues MRIGVGVSTAPDVRRAAAEAAAHAREELAGGTPALAVLLGSRSHTDQAVDLLAAVQASVEPAALIGCVAQGIVAGRHELE NEPAVAVWLASGPPAETFHLDFVRTGSGALITGYRFDRTAHDLHLLLPDPYSFPSNLLIEHLNTDLPGTTVVGGVVSGGR RRGDTRLFRDRDVLTSGLVGVRLPGAHSVSVVSQGCRPIGEPYIVTGADGAVITELGGRPPLHRLREIVLGMAPDEQELV SRGLQIGIVVDEHLAVPGQGDFLIRGLLGADPTTGAIGIGEVVEVGATVQFQVRDAAAADKDLRLAVERAAAELPGPPVG GLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAGEIGPVAGHNALHGFTASMALFVD >Mature_383_residues MRIGVGVSTAPDVRRAAAEAAAHAREELAGGTPALAVLLGSRSHTDQAVDLLAAVQASVEPAALIGCVAQGIVAGRHELE NEPAVAVWLASGPPAETFHLDFVRTGSGALITGYRFDRTAHDLHLLLPDPYSFPSNLLIEHLNTDLPGTTVVGGVVSGGR RRGDTRLFRDRDVLTSGLVGVRLPGAHSVSVVSQGCRPIGEPYIVTGADGAVITELGGRPPLHRLREIVLGMAPDEQELV SRGLQIGIVVDEHLAVPGQGDFLIRGLLGADPTTGAIGIGEVVEVGATVQFQVRDAAAADKDLRLAVERAAAELPGPPVG GLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAGEIGPVAGHNALHGFTASMALFVD
Specific function: Unknown
COG id: COG4398
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.tuberculosis Rv0874c
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y628_MYCTU (P64729)
Other databases:
- EMBL: BX842574 - EMBL: AE000516 - PIR: A70612 - RefSeq: NP_215142.1 - RefSeq: NP_335066.1 - EnsemblBacteria: EBMYCT00000000201 - EnsemblBacteria: EBMYCT00000070565 - GeneID: 887986 - GeneID: 925057 - GenomeReviews: AE000516_GR - GenomeReviews: AL123456_GR - KEGG: mtc:MT0656 - KEGG: mtu:Rv0628c - TIGR: MT0656 - TubercuList: Rv0628c - GeneTree: EBGT00050000018408 - HOGENOM: HBG292420 - OMA: VISEGIC - ProtClustDB: CLSK790643 - GO: GO:0040007 - InterPro: IPR019494 - InterPro: IPR013702 - InterPro: IPR016741 - PIRSF: PIRSF018953 - SMART: SM00897
Pfam domain/function: PF08495 FIST; PF10442 FIST_C
EC number: NA
Molecular weight: Translated: 39607; Mature: 39607
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x13c9d3fc)-; HASH(0x1261d188)-;
Cys/Met content:
0.8 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIGVGVSTAPDVRRAAAEAAAHAREELAGGTPALAVLLGSRSHTDQAVDLLAAVQASVE CEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC PAALIGCVAQGIVAGRHELENEPAVAVWLASGPPAETFHLDFVRTGSGALITGYRFDRTA HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEECCCCC HDLHLLLPDPYSFPSNLLIEHLNTDLPGTTVVGGVVSGGRRRGDTRLFRDRDVLTSGLVG CEEEEEECCCCCCCHHHHHHHHCCCCCCHHEEHHHHCCCCCCCCCHHHHHHHHHHHCCEE VRLPGAHSVSVVSQGCRPIGEPYIVTGADGAVITELGGRPPLHRLREIVLGMAPDEQELV EECCCCCHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHH SRGLQIGIVVDEHLAVPGQGDFLIRGLLGADPTTGAIGIGEVVEVGATVQFQVRDAAAAD HCCCEEEEEEECCEECCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCC KDLRLAVERAAAELPGPPVGGLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAG CHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCC EIGPVAGHNALHGFTASMALFVD CCCCCCCCCHHHHHHEEEEEEEH >Mature Secondary Structure MRIGVGVSTAPDVRRAAAEAAAHAREELAGGTPALAVLLGSRSHTDQAVDLLAAVQASVE CEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHCCCC PAALIGCVAQGIVAGRHELENEPAVAVWLASGPPAETFHLDFVRTGSGALITGYRFDRTA HHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEEEEEECCCCEEEEEECCCCC HDLHLLLPDPYSFPSNLLIEHLNTDLPGTTVVGGVVSGGRRRGDTRLFRDRDVLTSGLVG CEEEEEECCCCCCCHHHHHHHHCCCCCCHHEEHHHHCCCCCCCCCHHHHHHHHHHHCCEE VRLPGAHSVSVVSQGCRPIGEPYIVTGADGAVITELGGRPPLHRLREIVLGMAPDEQELV EECCCCCHHHHHHHCCCCCCCCEEEECCCCEEEECCCCCCCHHHHHHHHHCCCCCHHHHH SRGLQIGIVVDEHLAVPGQGDFLIRGLLGADPTTGAIGIGEVVEVGATVQFQVRDAAAAD HCCCEEEEEEECCEECCCCCCEEEEEECCCCCCCCCCCCHHHHHCCCEEEEEEECCCCCC KDLRLAVERAAAELPGPPVGGLLFTCNGRGRRMFGVTDHDASTIEDLLGGIPLAGFFAAG CHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEEECCCCHHHHHHHHCCCCHHHHHHCC EIGPVAGHNALHGFTASMALFVD CCCCCCCCCHHHHHHEEEEEEEH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036