Click here to switch to the map view.

The map label for this gene is ydjX [C]

Identifier: 121636544

GI number: 121636544

Start: 748039

End: 748779

Strand: Reverse

Name: ydjX [C]

Synonym: BCG_0671c

Alternate gene names: 121636544

Gene position: 748779-748039 (Counterclockwise)

Preceding gene: 121636547

Following gene: 121636535

Centisome position: 17.12

GC content: 69.77

Gene sequence:

>741_bases
ATGAGCACTCACAACGATTCCGCACCGACATCCCGGCGACGCCACATCGTGCGGCTTGTCGTGTTCGCCGGCTTCCTTGT
AGGAATGTTCTACCTGGTAGCCGCCACGGACGTCATCGATGTGGCCGCGGTGCGGGGCGCGGTCTCGGCGACCGGGCCGG
CGGCGCCGCTGACCTATGTCGTAGTGTCGGCCGTGCTCGGCGCGTTGTTCGTCCCGGGCCCGATCCTGGCCGCAAGCAGC
GGGCTGCTGTTCGGTCCGCTAGTGGGGGTCTTCGTGACGCTGGGTGCCACGGTGGGCACCGCCGTCGTCGCGAGCCTGGT
CGGCCGTCGAGCCGGCCGGGCCAGCGCGCGAGCCCTGCTGGGCGGGGAACGTGCCGATCGCACCGACGCGCTGATCGAAC
GATGCGGCCTGTGGGCCGTCGTCGGCCAACGCTTTGTCCCCGGCATATCGGATGCGTTCGCCTCCTATGCGTTCGGGACG
TTCGGAGTTCCGTTGTGGCAGATGGCCGTCGGTGCATTCATCGGTTCCGCGCCGCGGGCATTCGCCTACACCGCATTGGG
TGCGGCGATCGGCGATCGCTCACCGCTGCTGGCGTCCTGCGCGATCGCGGTGTGGTGCGTCACCGCCATCATCGGTGCGT
TCGCGGCGCGACACGGGTACCGCCAGTGGCGTGCACACGCCCGTGGCGACGGCGCGGACGGCGGCGTCGAGGATCCGGAT
CGCGAAGTCGGAGCACGCTGA

Upstream 100 bases:

>100_bases
CGGGTTGCTCGCCGGACGGCGCCCGCGCAGCCGAGGTTCCCCAGCCAACGCCGGGGACGACGGGCGCGGCCAGCGTCGGT
GCGGAACAATCACGGTCAGC

Downstream 100 bases:

>100_bases
GCGGTCGACATGCCTTGTGAACCTTCTGCCGCACTTAACAACACCGTTGACGCTGCCGAAAGCCGGTGCGGCGAACACCT
GGCTGACTAAGAATTAGGGC

Product: putative transmembrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 245

Protein sequence:

>246_residues
MSTHNDSAPTSRRRHIVRLVVFAGFLVGMFYLVAATDVIDVAAVRGAVSATGPAAPLTYVVVSAVLGALFVPGPILAASS
GLLFGPLVGVFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDALIERCGLWAVVGQRFVPGISDAFASYAFGT
FGVPLWQMAVGAFIGSAPRAFAYTALGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGGVEDPD
REVGAR

Sequences:

>Translated_246_residues
MSTHNDSAPTSRRRHIVRLVVFAGFLVGMFYLVAATDVIDVAAVRGAVSATGPAAPLTYVVVSAVLGALFVPGPILAASS
GLLFGPLVGVFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDALIERCGLWAVVGQRFVPGISDAFASYAFGT
FGVPLWQMAVGAFIGSAPRAFAYTALGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGGVEDPD
REVGAR
>Mature_245_residues
STHNDSAPTSRRRHIVRLVVFAGFLVGMFYLVAATDVIDVAAVRGAVSATGPAAPLTYVVVSAVLGALFVPGPILAASSG
LLFGPLVGVFVTLGATVGTAVVASLVGRRAGRASARALLGGERADRTDALIERCGLWAVVGQRFVPGISDAFASYAFGTF
GVPLWQMAVGAFIGSAPRAFAYTALGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGGVEDPDR
EVGAR

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y625_MYCTU (P67115)

Other databases:

- EMBL:   BX842574
- EMBL:   AE000516
- PIR:   F70611
- RefSeq:   NP_215139.1
- RefSeq:   NP_335063.1
- EnsemblBacteria:   EBMYCT00000001584
- EnsemblBacteria:   EBMYCT00000072431
- GeneID:   887967
- GeneID:   925054
- GenomeReviews:   AE000516_GR
- GenomeReviews:   AL123456_GR
- KEGG:   mtc:MT0653
- KEGG:   mtu:Rv0625c
- TIGR:   MT0653
- TubercuList:   Rv0625c
- GeneTree:   EBGT00050000016793
- HOGENOM:   HBG568355
- OMA:   APRAFVY
- ProtClustDB:   CLSK790641
- InterPro:   IPR015414

Pfam domain/function: PF09335 SNARE_assoc

EC number: NA

Molecular weight: Translated: 25212; Mature: 25081

Theoretical pI: Translated: 9.95; Mature: 9.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x13f6df88)-; HASH(0x14379bc0)-; HASH(0x1460c644)-; HASH(0x1414d5f0)-; HASH(0x13634c6c)-;

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTHNDSAPTSRRRHIVRLVVFAGFLVGMFYLVAATDVIDVAAVRGAVSATGPAAPLTYV
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VVSAVLGALFVPGPILAASSGLLFGPLVGVFVTLGATVGTAVVASLVGRRAGRASARALL
HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GGERADRTDALIERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
FAYTALGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGGVEDPD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
REVGAR
HHCCCH
>Mature Secondary Structure 
STHNDSAPTSRRRHIVRLVVFAGFLVGMFYLVAATDVIDVAAVRGAVSATGPAAPLTYV
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHH
VVSAVLGALFVPGPILAASSGLLFGPLVGVFVTLGATVGTAVVASLVGRRAGRASARALL
HHHHHHHHHHCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
GGERADRTDALIERCGLWAVVGQRFVPGISDAFASYAFGTFGVPLWQMAVGAFIGSAPRA
CCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHH
FAYTALGAAIGDRSPLLASCAIAVWCVTAIIGAFAARHGYRQWRAHARGDGADGGVEDPD
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
REVGAR
HHCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036