Click here to switch to the map view.

The map label for this gene is kdpD [C]

Identifier: 121636518

GI number: 121636518

Start: 728789

End: 729295

Strand: Reverse

Name: kdpD [C]

Synonym: BCG_0646c

Alternate gene names: 121636518

Gene position: 729295-728789 (Counterclockwise)

Preceding gene: 121636519

Following gene: 121636517

Centisome position: 16.67

GC content: 68.84

Gene sequence:

>507_bases
GTGCCGATCACTCCCCTGCTGCACGAGAGCGTGGCCCGCTTCGCCGCTACTGGAGCGGACATCACCACACGCGCGGAACC
GGACCTGTTCGTCTCGATCGATCCGGACCACCTGCGCCGAATCCTCACCGCCGTGCTCGACAACGCCATCACCCACGGGG
ACGGTGAAATCGCTGTCACCGCGCACGCCCGCGACGGTGCAGTCGACATCGGCGTCCGCGACCACGGCCCCGGATTCGCC
GACCACTTTCTTCCCGTCGCCTTCGACCGATTCACCCGCGCCGACACCGCCCGCGGCGGTCGCGGCAGCGGCCTCGGCCT
GGCCATCGTCGCCGCCCTCACCACCACCCACGGCGGACATGCCAACGCCACCAACCACCCCGACGGCGGGGCCGAACTCC
GCATCACCCTCCCCACACCGCGGCCGCCCTTCCACGAGGAGCTTCCGCGGATCACGTCATCAGATACAAAGGACCCGAAT
CGGGAGCACGACACTAGCGACCAATAG

Upstream 100 bases:

>100_bases
CTCCGCGCTCGAAGAAACCCGCCGGCTCAGCGGACTGGCCGACCAACTGCTCACCCTGGCCCGCGCCGACCGCCCCGAAT
CCCACCCCTCCGCCAAAGCG

Downstream 100 bases:

>100_bases
TCGCCACGCCGCGCCGCAGCTGACGGTGTGGTCGTCGGGGTCGTGGTAGCGGCGGTGAGTCGACTTCCGCACCTGAGTGG
GAAGCCATTGGTATCGTATT

Product: putative two component sensor kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFA
DHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPN
REHDTSDQ

Sequences:

>Translated_168_residues
MPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFA
DHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPN
REHDTSDQ
>Mature_167_residues
PITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVTAHARDGAVDIGVRDHGPGFAD
HFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGHANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNR
EHDTSDQ

Specific function: Member of the two-component system HK/tcrA. Phosphorylates tcrA [H]

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786912, Length=129, Percent_Identity=35.6589147286822, Blast_Score=81, Evalue=3e-17,
Organism=Escherichia coli, GI1788393, Length=133, Percent_Identity=32.3308270676692, Blast_Score=70, Evalue=6e-14,
Organism=Escherichia coli, GI1789808, Length=139, Percent_Identity=30.9352517985612, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467 [H]

Pfam domain/function: PF02518 HATPase_c [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 17854; Mature: 17723

Theoretical pI: Translated: 5.92; Mature: 5.92

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
CCCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEE
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
EECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
CCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PITPLLHESVARFAATGADITTRAEPDLFVSIDPDHLRRILTAVLDNAITHGDGEIAVT
CCCHHHHHHHHHHHHCCCCEEECCCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCEEEE
AHARDGAVDIGVRDHGPGFADHFLPVAFDRFTRADTARGGRGSGLGLAIVAALTTTHGGH
EECCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCC
ANATNHPDGGAELRITLPTPRPPFHEELPRITSSDTKDPNREHDTSDQ
CCCCCCCCCCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12218036 [H]