Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636455
Identifier: 121636455
GI number: 121636455
Start: 659190
End: 660623
Strand: Reverse
Name: 121636455
Synonym: BCG_0581c
Alternate gene names: NA
Gene position: 660623-659190 (Counterclockwise)
Preceding gene: 121636459
Following gene: 121636452
Centisome position: 15.1
GC content: 66.81
Gene sequence:
>1434_bases GTGGGCCTGAGCAGCGACGACACCCGACGACGCGAGGTCGTCCGCGACTTGGCCGCTGGTGCCCTGCTCATCGGTGCGCT GTTTTTCCCATGGAACCTGTATTTCGGTTTCCGAATCCCGGACAGCAGCAAGACCGTGTTCGGGTTGCTGCTGGCGGTGA CATCGCTCTCTTTGGCATCGCTTGCCGTGACCTTCGCCGGGAGGCGCTCACAGCTTCGCCTGGGCCTCAACGTCCCCTAT CTGCTGCTGGTGCTGGCCTTCGTGGTGTTCGACGCGATCCAGACGATTCGACTCGGCGGCACCGTCCACGTGCCCGGTGG TGTCGGGCCGGGGGGATGGCTGGGGATCACCGGCGCGCTGTTGAGCGCGCAACCGGCGCTAACCGGCGCTACCACCGATG AGGGCAGCCACAGCAGGTGGCTGCGGGCCACCCAGTTCCTCGGCTACGCGTCTATGTTGGGTGCGGCCCTCAGCACCGGT TTCAACCTGAGCTGGCGGGTCAGGTACGCGTTGGAGCCCGCGGCCGGCGCGTCCGGTTTTGGCAAACAGAACCTCGCGGT CATCGACACGGCGGTGGTGTACGGCGTGGTAGCCCTGGCCGCCGTGCTGGTCGCGTCCCGGTGGCTGCTTCGGCCTACAG CGGCCGAAGCGCTCTCAACCGTGGCGCTGGGTGGCTCCACCCTGATCGCCGGGTCCATCGTGTGGAGCCTTCCCATCGGC CGCGAGATCGACGCGTTCCACGGCATTGCCCAAAACACGTCGACGGCCGGCGTGGGATACGAGGGTTATCTGGTGTGGGC CGCGGCCGCGGCAATGTGTGCGCCGCTGACCCTGTTCAGGTCCCCGAACGCGCCACCGATCGACAAAACCGTGTGGCGGG CAGCGTCCCGAAACGGCTTGCTGCTCATCGCCGTGTGGTGCCTGGGCTCGGTAGCGATGCGGTTGACCGACCTCGTCGTC GCGGTGCTGTTGAATTATCCGTTCTCGCGCTACGACAGCATGGCGCTGGCTGCGTTCGATCTGGCCACCGCGGTCCTAGC GATCTGGCTTCGCTTCAACATGGCGACCGAGGCCCTGCCCGCGAGGCTGATCTCGTCGCTGTGCGGATTGCTATGCACAT TCACCGTTTCGCGCGTCATCGTCGGCGTCGTCCTGGCTCCGCGATTCCAGGCATCTTCGGGCGGGTCGGCTCACCCCGTC TACGGAAACGATCTTGCCCAGCAGATCACCAGCACCTTCGATGTGGTGCTGTGCGGCCTGGCGCTCAGCATCCTCGCGGC GGCCATCGTCATCGGCAGGCTGCGCCAGCTGCCGCAACCCCCGCACACCCCGGCGCTGTCCCGGCCTGCTGGATCCCCCC GGATTTTCAGGTCAGCTGGGTCGACGCACCCAGTGCGGCCGAAGATCTACCGGCCGCCGGACCACTCGTCGTAG
Upstream 100 bases:
>100_bases CTATGTTCGCAAGCGAGCAACGCAGTCGGCCCGGCCGGGTGCACCCACGCCACCACAGGACCGACTCGGCGCCAACCGTT CTTGATTCCCGGGGGGCATC
Downstream 100 bases:
>100_bases CTCGAGCGGTCAGCGAAGCGGCGCGAACGCGAACTCACGCAGTCCTTCGCCTGGATCGACGGCCGCGCGGAACCCGAGCA CGCGGGCGGCCCGCGCGGGA
Product: putative integral membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 477; Mature: 476
Protein sequence:
>477_residues MGLSSDDTRRREVVRDLAAGALLIGALFFPWNLYFGFRIPDSSKTVFGLLLAVTSLSLASLAVTFAGRRSQLRLGLNVPY LLLVLAFVVFDAIQTIRLGGTVHVPGGVGPGGWLGITGALLSAQPALTGATTDEGSHSRWLRATQFLGYASMLGAALSTG FNLSWRVRYALEPAAGASGFGKQNLAVIDTAVVYGVVALAAVLVASRWLLRPTAAEALSTVALGGSTLIAGSIVWSLPIG REIDAFHGIAQNTSTAGVGYEGYLVWAAAAAMCAPLTLFRSPNAPPIDKTVWRAASRNGLLLIAVWCLGSVAMRLTDLVV AVLLNYPFSRYDSMALAAFDLATAVLAIWLRFNMATEALPARLISSLCGLLCTFTVSRVIVGVVLAPRFQASSGGSAHPV YGNDLAQQITSTFDVVLCGLALSILAAAIVIGRLRQLPQPPHTPALSRPAGSPRIFRSAGSTHPVRPKIYRPPDHSS
Sequences:
>Translated_477_residues MGLSSDDTRRREVVRDLAAGALLIGALFFPWNLYFGFRIPDSSKTVFGLLLAVTSLSLASLAVTFAGRRSQLRLGLNVPY LLLVLAFVVFDAIQTIRLGGTVHVPGGVGPGGWLGITGALLSAQPALTGATTDEGSHSRWLRATQFLGYASMLGAALSTG FNLSWRVRYALEPAAGASGFGKQNLAVIDTAVVYGVVALAAVLVASRWLLRPTAAEALSTVALGGSTLIAGSIVWSLPIG REIDAFHGIAQNTSTAGVGYEGYLVWAAAAAMCAPLTLFRSPNAPPIDKTVWRAASRNGLLLIAVWCLGSVAMRLTDLVV AVLLNYPFSRYDSMALAAFDLATAVLAIWLRFNMATEALPARLISSLCGLLCTFTVSRVIVGVVLAPRFQASSGGSAHPV YGNDLAQQITSTFDVVLCGLALSILAAAIVIGRLRQLPQPPHTPALSRPAGSPRIFRSAGSTHPVRPKIYRPPDHSS >Mature_476_residues GLSSDDTRRREVVRDLAAGALLIGALFFPWNLYFGFRIPDSSKTVFGLLLAVTSLSLASLAVTFAGRRSQLRLGLNVPYL LLVLAFVVFDAIQTIRLGGTVHVPGGVGPGGWLGITGALLSAQPALTGATTDEGSHSRWLRATQFLGYASMLGAALSTGF NLSWRVRYALEPAAGASGFGKQNLAVIDTAVVYGVVALAAVLVASRWLLRPTAAEALSTVALGGSTLIAGSIVWSLPIGR EIDAFHGIAQNTSTAGVGYEGYLVWAAAAAMCAPLTLFRSPNAPPIDKTVWRAASRNGLLLIAVWCLGSVAMRLTDLVVA VLLNYPFSRYDSMALAAFDLATAVLAIWLRFNMATEALPARLISSLCGLLCTFTVSRVIVGVVLAPRFQASSGGSAHPVY GNDLAQQITSTFDVVLCGLALSILAAAIVIGRLRQLPQPPHTPALSRPAGSPRIFRSAGSTHPVRPKIYRPPDHSS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50203; Mature: 50072
Theoretical pI: Translated: 10.32; Mature: 10.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLSSDDTRRREVVRDLAAGALLIGALFFPWNLYFGFRIPDSSKTVFGLLLAVTSLSLAS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHH LAVTFAGRRSQLRLGLNVPYLLLVLAFVVFDAIQTIRLGGTVHVPGGVGPGGWLGITGAL HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH LSAQPALTGATTDEGSHSRWLRATQFLGYASMLGAALSTGFNLSWRVRYALEPAAGASGF HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC GKQNLAVIDTAVVYGVVALAAVLVASRWLLRPTAAEALSTVALGGSTLIAGSIVWSLPIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCC REIDAFHGIAQNTSTAGVGYEGYLVWAAAAAMCAPLTLFRSPNAPPIDKTVWRAASRNGL CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCE LLIAVWCLGSVAMRLTDLVVAVLLNYPFSRYDSMALAAFDLATAVLAIWLRFNMATEALP EEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLISSLCGLLCTFTVSRVIVGVVLAPRFQASSGGSAHPVYGNDLAQQITSTFDVVLCGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALSILAAAIVIGRLRQLPQPPHTPALSRPAGSPRIFRSAGSTHPVRPKIYRPPDHSS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure GLSSDDTRRREVVRDLAAGALLIGALFFPWNLYFGFRIPDSSKTVFGLLLAVTSLSLAS CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHHHHHHHHH LAVTFAGRRSQLRLGLNVPYLLLVLAFVVFDAIQTIRLGGTVHVPGGVGPGGWLGITGAL HHHHHCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCHHHHHHHHH LSAQPALTGATTDEGSHSRWLRATQFLGYASMLGAALSTGFNLSWRVRYALEPAAGASGF HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCC GKQNLAVIDTAVVYGVVALAAVLVASRWLLRPTAAEALSTVALGGSTLIAGSIVWSLPIG CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHEECCCC REIDAFHGIAQNTSTAGVGYEGYLVWAAAAAMCAPLTLFRSPNAPPIDKTVWRAASRNGL CCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHCCCCCE LLIAVWCLGSVAMRLTDLVVAVLLNYPFSRYDSMALAAFDLATAVLAIWLRFNMATEALP EEEHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH ARLISSLCGLLCTFTVSRVIVGVVLAPRFQASSGGSAHPVYGNDLAQQITSTFDVVLCGL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH ALSILAAAIVIGRLRQLPQPPHTPALSRPAGSPRIFRSAGSTHPVRPKIYRPPDHSS HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA