Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is 121636326
Identifier: 121636326
GI number: 121636326
Start: 529115
End: 530434
Strand: Reverse
Name: 121636326
Synonym: BCG_0451c
Alternate gene names: NA
Gene position: 530434-529115 (Counterclockwise)
Preceding gene: 121636328
Following gene: 121636325
Centisome position: 12.13
GC content: 66.14
Gene sequence:
>1320_bases GTGACGGTTGAGCTGGCGCACCCGTCGACCGAGCCGCTGGGATCACGCTCGCCCGCCGAACCGGCACATCCCCGGCGGTG GTTCATCTCGACGACACCCGGCCGAATCATGACGATCGGCATCGTGTTGGCGGCTCTCGGCGTGGCCAGCGCCTTCGCTA CCTCCACCACCATCGAACACCGGCAGCAGGTGTTGACCGCGGTGCTCGACCACACCGAGCCGCTGTCGTTCGCGGCTGGA CGGCTGTACACCACGCTGTCGGTGGCTGATGCCGCGGCCGCCACCGCGTTCATAGCCCAAGCCGAGCCGGGCGGCGTTCG GCTGCGCTACGAGCAGGCCATTACCGATGCCTCGGTAGCGGTAACCCGGGCCTCGAGCGGGCTCACCGACGAATCGTTGG TGCAATTGCTGGGCCGGATCAACGCCGAATTGGCCGTCTACACCGGCCTGGTCGAGATCGCCCGCGCCAACAACCGGGCG GGCAACCCGGTCGGGTCGTCATATCTGTCAGAGGCGTCGGGGCTGATGCAATCGACGATCCTGCCCGACGCGCAACGGCT CTACCAGGCGACATCAGCACGGGTAGATCGGGAAACCACCGCGTCGACCCAGATCCCGGCCCCGGTGATCCTGGTGGTCG CCACCACCGTGGTCTTCGGTGCGTTCGCACATCGCTGGCTGGCCCGGCGCACCAGGCGACGGATTAACCCCGGTCTTGTC GTGGGCGCGCTCGGTATTCTCGTCATGGTGGTGTGGGTGGGAACTGCGCTGACCATCTCTACAACGGCCAGCCGTAGCGC GAAAGATACCGCGGCTGAGTCACTCAAGACCATCACCAACCTGGCGATCACCGCCCAACAGGCACGGGCCGACGAGACAC TGTCGCTGATCCGGCGCGGCGACGAAGAGGTCCGCAAGCAGGCCTTCTATCAGCGCATCGACGCCATGCAACGCCAGCTC AACGACTACATGGCCCGCCGCCACGCCGTCGACAAACCCGATCTGCAGGGCGCCGACCAGCTGTTGGTGCGCTGGCGGCA GGCCAACGACCGGATCAATTCCTACATCTCCGTCGGCAACTATCGGGCCGCCACTCAGGTGGCACTGGGTAAAGGCGAGG ACGATGCTACCCCCGCATTCGACAAGCTCGACGAAGCACTGACCAAAGCCATGGGACAAAGCCGCACCCAACTGCGCCAC GACATCCTCAATGCGCATCGCGGGCTGGCAGGCGCGCAGGTGGGCGGCGTGGTGCTCAGCTTAGGTGCCGCCATTGCCGT CGCGCTCGGCCTGTGGCCCCGGCTGAAAGAGTATCGGTGA
Upstream 100 bases:
>100_bases TGGGCAATTGCGTATGCCTAACACCATCTGTCGGAACCTTCTCTTAGAATTCGCTTATAGAGTTTCGTTGCGTTAGCCGA AAGATGAGGTCCTAACAGAC
Downstream 100 bases:
>100_bases TGACGCGCCGGGCCCTCCTGGCGCGGGCGGCAGCCCCACTCGCGCCGCTGGCCTTGGCGATGGTGCTGGCCAGTTGCGGC CACTCGGAAACGCTGGGGGT
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; PE-PGRS Family Protein
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAALGVASAFATSTTIEHRQQVLTAVLDHTEPLSFAAG RLYTTLSVADAAAATAFIAQAEPGGVRLRYEQAITDASVAVTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRA GNPVGSSYLSEASGLMQSTILPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAFAHRWLARRTRRRINPGLV VGALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNLAITAQQARADETLSLIRRGDEEVRKQAFYQRIDAMQRQL NDYMARRHAVDKPDLQGADQLLVRWRQANDRINSYISVGNYRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLRH DILNAHRGLAGAQVGGVVLSLGAAIAVALGLWPRLKEYR
Sequences:
>Translated_439_residues MTVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAALGVASAFATSTTIEHRQQVLTAVLDHTEPLSFAAG RLYTTLSVADAAAATAFIAQAEPGGVRLRYEQAITDASVAVTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRA GNPVGSSYLSEASGLMQSTILPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAFAHRWLARRTRRRINPGLV VGALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNLAITAQQARADETLSLIRRGDEEVRKQAFYQRIDAMQRQL NDYMARRHAVDKPDLQGADQLLVRWRQANDRINSYISVGNYRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLRH DILNAHRGLAGAQVGGVVLSLGAAIAVALGLWPRLKEYR >Mature_438_residues TVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAALGVASAFATSTTIEHRQQVLTAVLDHTEPLSFAAGR LYTTLSVADAAAATAFIAQAEPGGVRLRYEQAITDASVAVTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRAG NPVGSSYLSEASGLMQSTILPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAFAHRWLARRTRRRINPGLVV GALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNLAITAQQARADETLSLIRRGDEEVRKQAFYQRIDAMQRQLN DYMARRHAVDKPDLQGADQLLVRWRQANDRINSYISVGNYRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLRHD ILNAHRGLAGAQVGGVVLSLGAAIAVALGLWPRLKEYR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47164; Mature: 47033
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAALGVASAFATSTTIEH CEEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQQVLTAVLDHTEPLSFAAGRLYTTLSVADAAAATAFIAQAEPGGVRLRYEQAITDASVA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHH VTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRAGNPVGSSYLSEASGLMQSTI HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC LPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAFAHRWLARRTRRRINPGLV CHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VGALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNLAITAQQARADETLSLIRRG HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEEVRKQAFYQRIDAMQRQLNDYMARRHAVDKPDLQGADQLLVRWRQANDRINSYISVGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLRHDILNAHRGLAGAQVGGVVLS CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LGAAIAVALGLWPRLKEYR HHHHHHHHHHHHHHHHCCC >Mature Secondary Structure TVELAHPSTEPLGSRSPAEPAHPRRWFISTTPGRIMTIGIVLAALGVASAFATSTTIEH EEEECCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH RQQVLTAVLDHTEPLSFAAGRLYTTLSVADAAAATAFIAQAEPGGVRLRYEQAITDASVA HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCHHHHH VTRASSGLTDESLVQLLGRINAELAVYTGLVEIARANNRAGNPVGSSYLSEASGLMQSTI HHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHC LPDAQRLYQATSARVDRETTASTQIPAPVILVVATTVVFGAFAHRWLARRTRRRINPGLV CHHHHHHHHHHHHHCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH VGALGILVMVVWVGTALTISTTASRSAKDTAAESLKTITNLAITAQQARADETLSLIRRG HHHHHHHHHHHHHCCHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC DEEVRKQAFYQRIDAMQRQLNDYMARRHAVDKPDLQGADQLLVRWRQANDRINSYISVGN HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCC YRAATQVALGKGEDDATPAFDKLDEALTKAMGQSRTQLRHDILNAHRGLAGAQVGGVVLS CHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH LGAAIAVALGLWPRLKEYR HHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA