Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636296
Identifier: 121636296
GI number: 121636296
Start: 489274
End: 490128
Strand: Reverse
Name: 121636296
Synonym: BCG_0421c
Alternate gene names: NA
Gene position: 490128-489274 (Counterclockwise)
Preceding gene: 121636297
Following gene: 121636295
Centisome position: 11.2
GC content: 68.07
Gene sequence:
>855_bases ATGGTCCCGCTTTGGTTCACGCTCTCGGCACTGTGCTTCGTCGGTGCCGTGGTGTTGCTGTACGTCGACATCGATCGACG CCGCGGGCGCAGCAGACGCCGCAAGTCGTGGGCGCGATCGCACGGGTTCGACTACGAACGGGAATCCACCGAGATACTCA AGCGCTGGACGCGCGGCGTGATGTCCACAGTTGGCGATGTTGCCGCCCATAACGTGGTGCTGGGTCAGATCCGCGGCGAG GCGGTGTACATCTTCGATCTCGAGGAAGTCGCCACCGTGATCGCGCTGCATCGCAAGGTGGGCACCAATGTCGTGGTCGA CCTGCGGCTCAAAGGCCTGAAAGAGCCACGAGAAAGCGACATCTGGCTGCTGGGCGCGATCGGGCCACGGATGGTGTACT CCACCAATCTAGACGCGGCCCGGCGCGCCTGCGATCGGCGGATGGTCACCTTCGCGCACACCGCGCCCGACTGCGCCGAA ATCATGTGGAACGAGCAGAACTGGACGCTGGTCAGCATGCCGATTGCCAGCACCCGTGCCCAGTGGGACGAGGGCCTGCG CACCGTGCGCCAATTCAACGACTTGCTGCGCGTGTTGCCGCCGCTGCCGCAGGAGATGCCCCAACAAACCGGGGTGGGAC CGCGCGGCGCGGCACCTGGCCGACCCGTGGCCCCGGGCGGCCCCGCGGAGTTACCGCCGCGGCGCGCCCAGCCGGATCCG GCAACCACGGTGCTGCCCGATCCGGCTCGTCGGGCCCCCGAGCCGATCCGCCGCGATGAAGGCCGCTCCGAAGGCGTTCG GCGCCCGCCGCCGGCCGGACGCAACGGCCAGCAGGCCACCAACTACCAACACTGA
Upstream 100 bases:
>100_bases CGCGCAGTGCGATTCCGCGTCTGCTCGGCGTGGAAGGTGACTGGGTTGTGACCTGGTCGCATTCTCGGTTCCGGGCCGCC AGCGGATAGGCTAAGCACCG
Downstream 100 bases:
>100_bases GACCGCGGATGTCACGCCCGAGGCCACCGCGGTGACGCCGCATGTGATCGGCCTCCCGCGTGGCGGCGTGAGGAGAAGCC GTGGCCGGACCTGACCGCGC
Product: putative secreted protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 284; Mature: 284
Protein sequence:
>284_residues MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGE AVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAE IMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH
Sequences:
>Translated_284_residues MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGE AVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAE IMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH >Mature_284_residues MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGVMSTVGDVAAHNVVLGQIRGE AVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESDIWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAE IMWNEQNWTLVSMPIASTRAQWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31802; Mature: 31802
Theoretical pI: Translated: 10.58; Mature: 10.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV CCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD HHHHHHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA EEEEECCCCCEEEECCHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCEEEECCCHHHHH QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH CCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVPLWFTLSALCFVGAVVLLYVDIDRRRGRSRRRKSWARSHGFDYERESTEILKRWTRGV CCCHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHH MSTVGDVAAHNVVLGQIRGEAVYIFDLEEVATVIALHRKVGTNVVVDLRLKGLKEPRESD HHHHHHHHHHHHHEEEECCCEEEEEEHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCCC IWLLGAIGPRMVYSTNLDAARRACDRRMVTFAHTAPDCAEIMWNEQNWTLVSMPIASTRA EEEEECCCCCEEEECCHHHHHHHHHHHHEEEECCCCHHHHHHCCCCCCEEEECCCHHHHH QWDEGLRTVRQFNDLLRVLPPLPQEMPQQTGVGPRGAAPGRPVAPGGPAELPPRRAQPDP HHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ATTVLPDPARRAPEPIRRDEGRSEGVRRPPPAGRNGQQATNYQH CCCCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA