Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is mmpL3 [H]
Identifier: 121636118
GI number: 121636118
Start: 274387
End: 277221
Strand: Reverse
Name: mmpL3 [H]
Synonym: BCG_0243c
Alternate gene names: 121636118
Gene position: 277221-274387 (Counterclockwise)
Preceding gene: 121636119
Following gene: 121636116
Centisome position: 6.34
GC content: 65.29
Gene sequence:
>2835_bases GTGTTCGCCTGGTGGGGTCGAACTGTGTACCGCTACCGGTTCATCGTAATCGGGGTCATGGTCGCTCTATGCCTCGGCGG CGGCGTTTTCGGGCTGAGCCTCGGCAAGCACGTCACGCAGAGCGGCTTCTACGACGACGGCAGCCAATCGGTGCAAGCAT CGGTGCTGGGCGACCAGGTCTACGGCCGAGACCGAAGCGGTCACATCGTCGCGATCTTCCAAGCCCCAGCCGGCAAGACC GTTGACGACCCGGCCTGGTCAAAGAAGGTCGTCGACGAGCTCAACCGGTTCCAGCAGGATCACCCCGACCAGGTCTTGGG ATGGGCCGGCTACCTGAGAGCGAGTCAGGCGACCGGCATGGCCACCGCCGACAAGAAGTACACCTTCGTTTCCATCCCGC TCAAGGGTGATGACGACGACACCATCCTCAACAACTACAAGGCCATCGCACCCGACCTGCAGCGGCTCGACGGAGGCACG GTGAAGCTCGCCGGGCTGCAACCGGTGGCCGAGGCGTTGACCGGCACCATCGCCACCGACCAACGGCGAATGGAAGTGCT GGCGCTGCCGTTGGTGGCGGTGGTGTTGTTCTTCGTGTTCGGCGGCGTGATCGCCGCCGGCCTACCGGTGATGGTCGGAG GGCTGTGCATCGCCGGCGCGCTGGGCATCATGCGGTTCCTCGCGATCTTCGGTCCCGTGCACTATTTCGCCCAGCCCGTG GTGTCGCTGATCGGTCTGGGGATCGCCATCGACTACGGGTTGTTCATCGTGAGCCGGTTCCGCGAAGAGATCGCCGAAGG CTACGACACCGAGACGGCAGTACGGCGCACGGTGATCACCGCCGGACGCACGGTGACGTTCTCGGCGGTGTTGATCGTCG CGTCGGCGATCGGTCTGCTGCTCTTCCCGCAGGGTTTCCTGAAGTCGCTGACCTACGCCACGATCGCATCGGTGATGCTG TCGGCCATCCTGTCTATCACCGTGTTGCCGGCCTGTCTGGGGATCCTGGGCAAACACGTCGACGCGCTCGGCGTGCGGAC CCTGTTCCGGGTGCCCTTCCTGGCGAACTGGAAGATTTCGGCCGCCTACCTGAACTGGCTCGCCGACCGCCTGCAGCGGA CCAAGACCCGCGAAGAGGTCGAAGCCGGCATCTGGGGCAAGCTGGTTAACCGGGTGATGAAGCGCCCAGTGCTGTTCGCC GCACCGATCGTCATCATCATGATTTTGCTGATTATCCCGGTGGGCAAGCTGTCATTGGGCGGGATCAGCGAGAAGTACTT GCCGCCGACCAATTCGGTGCGCCAGGCGCAGGAGGAGTTCGACAAACTCTTCCCCGGATACCGCACCAATCCGCTGACAC TGGTGATCCAGACCAGCAACCATCAACCGGTCACCGAGGCGCAGATCGCTGACATCCGCAGCAAGGCGATGGCGATCGGC GGATTCATCGAGCCGGACAACGATCCGGCGAATATGTGGCAAGAGCGTGCCTACGCGGTAGGCGCATCTAAAGATCCATC GGTGCGCGTCCTGCAGAACGGGTTGATCAACCCGGCTGACGCGTCGAAGAAGCTCACCGAGCTGCGCGCGATCACCCCGC CCAAAGGAATCACGGTCTTGGTCGGTGGAACTCCCGCCCTGGAGCTGGATTCAATCCACGGCCTGTTCGCGAAGATGCCG CTGATGGTGGTCATCCTGCTGACCACCACGATCGTCTTGATGTTCTTGGCGTTCGGCTCGGTGGTGCTGCCAATCAAGGC GACGCTGATGAGCGCTCTGACGCTCGGGTCCACCATGGGCATCCTGACGTGGATATTCGTCGACGGACACTTTTCGAAGT GGCTGAATTTCACGCCGACCCCGCTGACAGCGCCGGTGATCGGGCTGATCATCGCGCTGGTCTTCGGCCTATCCACCGAC TACGAGGTGTTCTTGGTGTCCCGGATGGTCGAGGCGCGAGAGCGCGGCATGTCGACCCAGGAGGCGATCCGGATCGGCAC CGCAGCCACCGGACGCATCATTACCGCCGCGGCGCTGATTGTTGCCGTCGTCGCGGGCGCGTTCGTGTTCTCCGACCTGG TGATGATGAAGTATCTGGCCTTTGGACTGATGGCGGCGCTGCTGCTGGACGCGACCGTGGTGCGGATGTTTTTAGTGCCA TCGGTGATGAAGCTGCTCGGCGATGACTGCTGGTGGGCACCGCGCTGGGCCAGACGCCTGCAGACCCGCATCGGGCTGGG CGAGATCCACCTGCCCGACGAGCGCAAGCGGCCCGTCAGCAACGGGCGTCCCGCACGTCCTCCGGTCACAGCTGGGCTGG TTGCGGCGCGCGCCGCTGGGGACCCGCGCCCACCGCACGATCCGACCCATCCGCTGGCGGAGTCACCTCGACCGGCCCGC TCGAGTCCAGCAAGCTCACCGGAGCTCACGCCTGCCCTGGAAGCAACTGCCGCGCCGGCGGCGCCGTCTGGGGCGAGCAC CACACGGATGCAGATCGGGTCGTCGACGGAGCCGCCGACAACCCGCCTCGCGGCTGCCGGTCGGTCCGTGCAGTCGCCAG CATCCACGCCGCCACCAACCCCGACCCCGCCATCGGCCCCGTCTGCCGGTCAGACCCGGGCTATGCCGCTTGCGGCGAAC CGCTCCACAGACGCAGCCGGTGACCCGGCCGAACCCACCGCGGCCCTGCCAATCATACGGTCGGACGGCGACGACTCAGA GGCAGCCACTGAGCAGCTGAATGCCCGCGGCACGAGCGATAAGACGCGTCAGCGCCGCCGCGGCGGCGGCGCCCTGTCCG CCCAGGATCTGCTTCGCCGCGAAGGACGCCTTTAA
Upstream 100 bases:
>100_bases GGCCGCTGTCCTCGCTGTTGACCTCGCGAGTGTGACAGCCGACGTGTGTGACAACCAAAAAGCAATACGCGGGTCGCTGC CGATCCAGTAAGGAGCTTAC
Downstream 100 bases:
>100_bases ACCTCGGTGAGGTGATCGGAAGAAACGTCTGCCACGTCGGCGAACGGATTCCCGCCCAGCAGCACCTGCACCGCATTGTT GAAGAAAGCGGCCGTCGGGA
Product: transmembrane transport protein mmpL3
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 944; Mature: 944
Protein sequence:
>944_residues MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYDDGSQSVQASVLGDQVYGRDRSGHIVAIFQAPAGKT VDDPAWSKKVVDELNRFQQDHPDQVLGWAGYLRASQATGMATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGT VKLAGLQPVAEALTGTIATDQRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALGIMRFLAIFGPVHYFAQPV VSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITAGRTVTFSAVLIVASAIGLLLFPQGFLKSLTYATIASVML SAILSITVLPACLGILGKHVDALGVRTLFRVPFLANWKISAAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLFA APIVIIMILLIIPVGKLSLGGISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQTSNHQPVTEAQIADIRSKAMAIG GFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLINPADASKKLTELRAITPPKGITVLVGGTPALELDSIHGLFAKMP LMVVILLTTTIVLMFLAFGSVVLPIKATLMSALTLGSTMGILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVFGLSTD YEVFLVSRMVEARERGMSTQEAIRIGTAATGRIITAAALIVAVVAGAFVFSDLVMMKYLAFGLMAALLLDATVVRMFLVP SVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPDERKRPVSNGRPARPPVTAGLVAARAAGDPRPPHDPTHPLAESPRPAR SSPASSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPTTRLAAAGRSVQSPASTPPPTPTPPSAPSAGQTRAMPLAAN RSTDAAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLRREGRL
Sequences:
>Translated_944_residues MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYDDGSQSVQASVLGDQVYGRDRSGHIVAIFQAPAGKT VDDPAWSKKVVDELNRFQQDHPDQVLGWAGYLRASQATGMATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGT VKLAGLQPVAEALTGTIATDQRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALGIMRFLAIFGPVHYFAQPV VSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITAGRTVTFSAVLIVASAIGLLLFPQGFLKSLTYATIASVML SAILSITVLPACLGILGKHVDALGVRTLFRVPFLANWKISAAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLFA APIVIIMILLIIPVGKLSLGGISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQTSNHQPVTEAQIADIRSKAMAIG GFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLINPADASKKLTELRAITPPKGITVLVGGTPALELDSIHGLFAKMP LMVVILLTTTIVLMFLAFGSVVLPIKATLMSALTLGSTMGILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVFGLSTD YEVFLVSRMVEARERGMSTQEAIRIGTAATGRIITAAALIVAVVAGAFVFSDLVMMKYLAFGLMAALLLDATVVRMFLVP SVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPDERKRPVSNGRPARPPVTAGLVAARAAGDPRPPHDPTHPLAESPRPAR SSPASSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPTTRLAAAGRSVQSPASTPPPTPTPPSAPSAGQTRAMPLAAN RSTDAAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLRREGRL >Mature_944_residues MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYDDGSQSVQASVLGDQVYGRDRSGHIVAIFQAPAGKT VDDPAWSKKVVDELNRFQQDHPDQVLGWAGYLRASQATGMATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGT VKLAGLQPVAEALTGTIATDQRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALGIMRFLAIFGPVHYFAQPV VSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITAGRTVTFSAVLIVASAIGLLLFPQGFLKSLTYATIASVML SAILSITVLPACLGILGKHVDALGVRTLFRVPFLANWKISAAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLFA APIVIIMILLIIPVGKLSLGGISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQTSNHQPVTEAQIADIRSKAMAIG GFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLINPADASKKLTELRAITPPKGITVLVGGTPALELDSIHGLFAKMP LMVVILLTTTIVLMFLAFGSVVLPIKATLMSALTLGSTMGILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVFGLSTD YEVFLVSRMVEARERGMSTQEAIRIGTAATGRIITAAALIVAVVAGAFVFSDLVMMKYLAFGLMAALLLDATVVRMFLVP SVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPDERKRPVSNGRPARPPVTAGLVAARAAGDPRPPHDPTHPLAESPRPAR SSPASSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPTTRLAAAGRSVQSPASTPPPTPTPPSAPSAGQTRAMPLAAN RSTDAAGDPAEPTAALPIIRSDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLRREGRL
Specific function: Unknown
COG id: COG2409
COG function: function code R; Predicted drug exporters of the RND superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mmpL family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004869 - InterPro: IPR000731 [H]
Pfam domain/function: PF03176 MMPL [H]
EC number: NA
Molecular weight: Translated: 100886; Mature: 100886
Theoretical pI: Translated: 9.91; Mature: 9.91
Prosite motif: PS50156 SSD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYDDGSQSVQASVLGDQV CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH YGRDRSGHIVAIFQAPAGKTVDDPAWSKKVVDELNRFQQDHPDQVLGWAGYLRASQATGM HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC ATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGTVKLAGLQPVAEALTGTIATD CCCCCCEEEEEEEECCCCCCHHHHCCHHHCCHHHHCCCCEEEEECCHHHHHHHHCCHHCC QRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALGIMRFLAIFGPVHYFAQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITAGRTVTFSAVLIVASAIGLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFPQGFLKSLTYATIASVMLSAILSITVLPACLGILGKHVDALGVRTLFRVPFLANWKIS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLFAAPIVIIMILLIIPVGKLSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC GISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQTSNHQPVTEAQIADIRSKAMAIG CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC GFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLINPADASKKLTELRAITPPKGITVL CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEE VGGTPALELDSIHGLFAKMPLMVVILLTTTIVLMFLAFGSVVLPIKATLMSALTLGSTMG ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVFGLSTDYEVFLVSRMVEARERGMSTQ HHHHHEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH EAIRIGTAATGRIITAAALIVAVVAGAFVFSDLVMMKYLAFGLMAALLLDATVVRMFLVP HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPDERKRPVSNGRPARPPVTAGLVAARAAG HHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCHHCCCCCCCCCCCCCHHHHHHHHHCCC DPRPPHDPTHPLAESPRPARSSPASSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCH TRLAAAGRSVQSPASTPPPTPTPPSAPSAGQTRAMPLAANRSTDAAGDPAEPTAALPIIR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEE SDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLRREGRL CCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCC >Mature Secondary Structure MFAWWGRTVYRYRFIVIGVMVALCLGGGVFGLSLGKHVTQSGFYDDGSQSVQASVLGDQV CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH YGRDRSGHIVAIFQAPAGKTVDDPAWSKKVVDELNRFQQDHPDQVLGWAGYLRASQATGM HCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCC ATADKKYTFVSIPLKGDDDDTILNNYKAIAPDLQRLDGGTVKLAGLQPVAEALTGTIATD CCCCCCEEEEEEEECCCCCCHHHHCCHHHCCHHHHCCCCEEEEECCHHHHHHHHCCHHCC QRRMEVLALPLVAVVLFFVFGGVIAAGLPVMVGGLCIAGALGIMRFLAIFGPVHYFAQPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VSLIGLGIAIDYGLFIVSRFREEIAEGYDTETAVRRTVITAGRTVTFSAVLIVASAIGLL HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH LFPQGFLKSLTYATIASVMLSAILSITVLPACLGILGKHVDALGVRTLFRVPFLANWKIS HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHH AAYLNWLADRLQRTKTREEVEAGIWGKLVNRVMKRPVLFAAPIVIIMILLIIPVGKLSLG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCC GISEKYLPPTNSVRQAQEEFDKLFPGYRTNPLTLVIQTSNHQPVTEAQIADIRSKAMAIG CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHC GFIEPDNDPANMWQERAYAVGASKDPSVRVLQNGLINPADASKKLTELRAITPPKGITVL CCCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHCCCCCCCEEEE VGGTPALELDSIHGLFAKMPLMVVILLTTTIVLMFLAFGSVVLPIKATLMSALTLGSTMG ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ILTWIFVDGHFSKWLNFTPTPLTAPVIGLIIALVFGLSTDYEVFLVSRMVEARERGMSTQ HHHHHEECCCHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCHH EAIRIGTAATGRIITAAALIVAVVAGAFVFSDLVMMKYLAFGLMAALLLDATVVRMFLVP HHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SVMKLLGDDCWWAPRWARRLQTRIGLGEIHLPDERKRPVSNGRPARPPVTAGLVAARAAG HHHHHHCCCCCCCHHHHHHHHHHCCCCCEECCCHHCCCCCCCCCCCCCHHHHHHHHHCCC DPRPPHDPTHPLAESPRPARSSPASSPELTPALEATAAPAAPSGASTTRMQIGSSTEPPT CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCEEECCCCCCCCH TRLAAAGRSVQSPASTPPPTPTPPSAPSAGQTRAMPLAANRSTDAAGDPAEPTAALPIIR HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCEEE SDGDDSEAATEQLNARGTSDKTRQRRRGGGALSAQDLLRREGRL CCCCCHHHHHHHHHCCCCCHHHHHHHHCCCCCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]