Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is 121636116
Identifier: 121636116
GI number: 121636116
Start: 271879
End: 273162
Strand: Reverse
Name: 121636116
Synonym: BCG_0241c
Alternate gene names: NA
Gene position: 273162-271879 (Counterclockwise)
Preceding gene: 121636118
Following gene: 121636114
Centisome position: 6.24
GC content: 66.98
Gene sequence:
>1284_bases ATGTATCGCGATTACGGCGCCACCTGCACGGTTACCCTTAAGCACGTGTCGCACGACGCCCCCGCCCGCAACCTCCGCCA GCGCGTGGGGGCACTCCCTCGCACGCGGGTGGGGGCACCCCCCGCTGAGGGCGTACCCCCGCGCGGCAAGTACTGGTGGT TGCGATGGGCGGTACTGGCCATCGTCGCAATCGTGCTTGCTATAGAGGTGGCGTTGGGCTGGGACCAGCTCGCCAAGGCC TGGGTGAGCTTGTATCGCGCCAAGTGGTGGTGGTTGCTGGCCGCGGTGGCAGCCGCGGGCGCCTCGATGCACAGCTTCGC CCAGATTCAGCGAACCCTGCTGAAATCCGCCGGGGTGCACGTCAAGCAATGGCGGTCGGAGGCCGCCTTCTACGCCGCCA ACTCGCTGAGCACCACGCTGCCGGGTGGGCCGGTGTTGTCGGCTACGTTCTTACTCCGTCAGCAACGCATCTGGGGCGCC TCGACGGTGGTGGCGTCATGGCAGCTGGTCATGTCGGGCGTGTTGCAGGCGGTGGGCTTGGCATTGCTCGGGTTGGGTGG CGCATTCTTCCTGGGCGCCAAGAACAACCCGTTCTCACTGCTGTTCACCCTGGGCGGCTTCGTCACATTGCTGCTACTGG CCCAGGCGGTGGCGTCGCGGCCGGAGCTCATCGAGGGGATCGGCAGGAGAGTTTTGTCGTGGGCCAACTCGGTTCGCGGT AGGCCGGCCGATGCCGGCCTACCGAAGTGGCGCGAGACGCTCATGCAGCTGGAATCGGTCAGCCTGGGCAGGCGCGACCT GGGCGTGGCGTTCGGTTGGTCGTTGTTCAACTGGATCGCCGACGTAGCCTGCCTCGGTTTCGCCGCGTACGCCGCCGGCG ACCATGCCTCGGTCGGTGGGCTGGCGGTCGCCTACGCCGCCGCCCGCGCGGTCGGCACCATACCGCTGATGCCCGGTGGT CTGTTGGTGGTCGAGGCGGTGCTGGTACCCGGCCTGGTATCCAGCGGCATGCCCTTGCCGAGTGCCATCTCGGCGATGTT GATCTACCGGCTGATCAGCTGGCTGCTCATCGCCGCAATCGGCTGGGTGGTGTTCTTCTTCATGTTCCGCACCGAGAGCA CCGCCGATTCCGACAACGATCGCGACCCGCCAACCGATCCAAACCTGCGACTTGTCATCCAACCGCAGGGCACACCCTGC GACGACCCGGTCGAAACCACACCGCAAGGTCCAGCGCCGACCCCTGACCTGCGACCAGAAGGCGGCGAGACACCGCCCCG GTAG
Upstream 100 bases:
>100_bases GCGTCGTAAGGTCGCGGCGGGTCGCGTCGAGCCCGCATAGTTACTTTGCCAGGCGGCACGATCCGGTCACGACCCCCCAA CGAGGCTGACACGGTTAGCG
Downstream 100 bases:
>100_bases GCGACCGCTGCCTCACGCTCGACTGCGCCGGACCCGGCGGCGGTCCGGCATCTACCGGCGGGCGCCCTGCACCGCCTGCA TCAAACCGATCGCCTGCAGG
Product: putative transmembrane protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 427; Mature: 427
Protein sequence:
>427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPRGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR
Sequences:
>Translated_427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPRGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR >Mature_427_residues MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPRGKYWWLRWAVLAIVAIVLAIEVALGWDQLAKA WVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVHVKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGA STVVASWQLVMSGVLQAVGLALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGGLAVAYAAARAVGTIPLMPGG LLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAIGWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPC DDPVETTPQGPAPTPDLRPEGGETPPR
Specific function: Unknown
COG id: COG0392
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45746; Mature: 45746
Theoretical pI: Translated: 10.05; Mature: 10.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPRGKYWWLRWAVLA CCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IVAIVLAIEVALGWDQLAKAWVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH VKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGASTVVASWQLVMSGVLQAVGL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPCDDPVETTPQGPAPTPDLRPE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGETPPR CCCCCCC >Mature Secondary Structure MYRDYGATCTVTLKHVSHDAPARNLRQRVGALPRTRVGAPPAEGVPPRGKYWWLRWAVLA CCCCCCCEEEEEEHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHH IVAIVLAIEVALGWDQLAKAWVSLYRAKWWWLLAAVAAAGASMHSFAQIQRTLLKSAGVH HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCH VKQWRSEAAFYAANSLSTTLPGGPVLSATFLLRQQRIWGASTVVASWQLVMSGVLQAVGL HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH ALLGLGGAFFLGAKNNPFSLLFTLGGFVTLLLLAQAVASRPELIEGIGRRVLSWANSVRG HHHHCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCC RPADAGLPKWRETLMQLESVSLGRRDLGVAFGWSLFNWIADVACLGFAAYAAGDHASVGG CCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH LAVAYAAARAVGTIPLMPGGLLVVEAVLVPGLVSSGMPLPSAISAMLIYRLISWLLIAAI HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH GWVVFFFMFRTESTADSDNDRDPPTDPNLRLVIQPQGTPCDDPVETTPQGPAPTPDLRPE HHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCC GGETPPR CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA