Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
---|---|
Accession | NC_008769 |
Length | 4,374,522 |
Click here to switch to the map view.
The map label for this gene is fusA2b [C]
Identifier: 121636033
GI number: 121636033
Start: 175372
End: 177516
Strand: Reverse
Name: fusA2b [C]
Synonym: BCG_0154c
Alternate gene names: 121636033
Gene position: 177516-175372 (Counterclockwise)
Preceding gene: 121636034
Following gene: 121636031
Centisome position: 4.06
GC content: 65.92
Gene sequence:
>2145_bases ATGGCCGACAGAGTGAATGCTTCCCAGGGCGCGGCCGCCGCTCCCACCGCAAACGGGCCCGGCGGCGTTCGCAACGTGGT TCTGGTGGGGCCCTCGGGGGGCGGCAAGACCACCCTCATCGAGGCTCTCCTGGTGGCGGCCAAGGTGTTGTCCAGGCCGG GCTCGGTCACCGAGGGCACCACGGTCTGCGACTTCGACGAGGCGGAGATCCGGCAACAGCGCTCGGTGGGCCTTGCGGTC GCCTCGCTGGCTTACGACGGCATCAAGGTCAACCTCGTCGACACCCCTGGGTACGCCGACTTCGTGGGTGAGCTGTGGGC CGGGTTGCGGGCCGCCGATTGCGCACTGTTCGTGATCGCGGCCAACGAGGGCGTCGACGAACCGACCAAGTCCCTGTGGC AGGAATGCAGCCAGGTCGGCATGCCCCGCGCGGTGGTCATCACCAAGCTGGACCACGCCCGGGCGAACTACCGGGAAGCG CTGACCGCGGCACAAGACGCCTTCGGCGACAAGGTCTTACCGCTCTACCTGCCGTCCGGTGACGGCCTGATCGGATTGCT TTCGCAGGCACTGTACGAGTACGCCGACGGCAAGCGAACGACACGAACCCCGGCCGAGTCGGACACCGAGCGAATCGAGG AGGCGCGCGGCGCCTTGATCGAAGGAATCATCGAGGAATCCGAGGATGAGTCCTTGATGGAGCGCTACCTCGGCGGCGAG ACGATCGACGAGTCGGTGCTGATCCAGGATCTGGAGAAAGCCGTCGCCCGAGGCTCGTTCTTCCCGGTGATTCCGGTGTG CAGCAGCACCGGGGTCGGCACACTGGAATTGCTTGAGGTAGCCACCCGCGGATTTCCGTCTCCGATGGAGCACCCACTGC CGGAGGTCTTTACCCCGCAGGGTGTCCCGCATGCGGAGCTGGCCTGTGACAATGACGCGCCGTTGCTCGCCGAGGTGGTG AAGACGACGTCGGACCCCTACGTCGGCCGGGTCAGCTTGGTGCGGGTGTTCTCCGGAACCATCAGGCCCGACACGACGGT CCATGTGTCGGGCCATTTCTCATCGTTTTTCGGCGGCGGAACTAGTAACACGCACCCCGACCACGACGAAGACGAGCGCA TCGGAGTCTTGTCGTTCCCGCTGGGCAAGCAACAGCGCCCGGCAGCAGCCGTGGTCGCGGGCGACATCTGCGCCATCGGC AAGCTGAGCCGGGCCGAGACCGGGGACACACTCTCGGATAAGGCCGAGCCCCTGGTGCTGAAACCCTGGACCATGCCCGA GCCGCTGCTGCCGATCGCCATTGCGGCGCATGCCAAGACCGACGAAGACAAGCTGTCGGTCGGGTTGGGCCGGTTGGCCG CCGAAGACCCGACACTGCGGATCGAGCAAAATCAAGAGACCCATCAGGTCGTGCTGTGGTGTATGGGCGAGGCCCATGCC GGCGTCGTCCTGGATACACTGGCCAACCGGTACGGCGTCAGCGTAGACACGATCGAGCTGCGGGTGCCGCTGCGGGAAAC CTTCGCCGGCAATGCGAAAGGCCATGGCCGCCACATCAAACAGTCCGGTGGTCACGGTCAGTACGGGGTGTGCGACATCG AGGTGGAGCCGCTGCCGGAGGGCTCCGGGTTCGAGTTCCTCGACAAAGTGGTTGGCGGGGCGGTGCCGCGGCAGTTTATC CCCAGTGTGGAGAAAGGTGTCCGCGCACAGATGGATAAGGGAGTGCACGCCGGCTACCCGGTGGTCGATATCCGGGTCAC GTTGCTCGACGGCAAAGCCCACAGCGTCGACTCTTCCGATTTCGCCTTCCAAATGGCCGGCGCGCTCGCATTGCGGGAGG CCGCGGCCGCGACGAAGGTGATCTTGCTCGAGCCAATCGATGAGATTTCGGTGCTGGTACCCGACGATTTCGTCGGCGCG GTGTTGGGCGACCTGTCCAGTCGTCGTGGCCGAGTGCTCGGCACCGAGACCGCGGGGCACGACCGCACGGTGATCAAGGC CGAGGTGCCTCAGGTCGAGCTGACCCGCTACGCAATCGATTTGCGCTCGCTGGCGCATGGGGCCGCATCCTTCACCCGTT CGTTTGCCCGCTACGAACCGATGCCGGAATCCGCCGCCGCCCGGGTAAAGGCCGGGGCCGGCTAG
Upstream 100 bases:
>100_bases GACCCGACCCTTGTGCTGGGCGGCAGTTGGGAGAAAAGTTGCCTACTACGTCCTGCTGGCCACACCACGGGAACCGACCC CGGAGAACTGGAGGAAAGCC
Downstream 100 bases:
>100_bases CTACACCGAATGGCCGAACCGTTCGGCGACAGCGCGGCGGTCGAGCGAACCCTTCGCGGTGTGCGGCAGCCCGCTGGCCT CCTGGAAGGAGGCCGGGATC
Product: elongation factor G
Products: GDP; phosphate
Alternate protein names: NA
Number of amino acids: Translated: 714; Mature: 713
Protein sequence:
>714_residues MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAV ASLAYDGIKVNLVDTPGYADFVGELWAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREA LTAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVV KTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIG KLSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFI PSVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGA VLGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG
Sequences:
>Translated_714_residues MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAV ASLAYDGIKVNLVDTPGYADFVGELWAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREA LTAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVV KTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIG KLSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFI PSVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGA VLGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG >Mature_713_residues ADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGTTVCDFDEAEIRQQRSVGLAVA SLAYDGIKVNLVDTPGYADFVGELWAGLRAADCALFVIAANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREAL TAAQDAFGDKVLPLYLPSGDGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGET IDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQGVPHAELACDNDAPLLAEVVK TTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGGTSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGK LSRAETGDTLSDKAEPLVLKPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHAG VVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPEGSGFEFLDKVVGGAVPRQFIP SVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSDFAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAV LGDLSSRRGRVLGTETAGHDRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG
Specific function: This Protein Promotes The GTP-Dependent Translocation Of The Nascent Protein Chain From The A-Site To The P-Site Of The Ribosome. [C]
COG id: COG0480
COG function: function code J; Translation elongation factors (GTPases)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. EF-G/EF-2 subfamily [H]
Homologues:
Organism=Homo sapiens, GI18390331, Length=704, Percent_Identity=28.6931818181818, Blast_Score=261, Evalue=1e-69, Organism=Homo sapiens, GI19923640, Length=732, Percent_Identity=26.0928961748634, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI25306287, Length=359, Percent_Identity=25.3481894150418, Blast_Score=112, Evalue=1e-24, Organism=Homo sapiens, GI25306283, Length=414, Percent_Identity=27.2946859903382, Blast_Score=107, Evalue=3e-23, Organism=Escherichia coli, GI1789738, Length=710, Percent_Identity=32.3943661971831, Blast_Score=353, Evalue=2e-98, Organism=Escherichia coli, GI1790835, Length=330, Percent_Identity=24.5454545454545, Blast_Score=77, Evalue=6e-15, Organism=Caenorhabditis elegans, GI17533571, Length=714, Percent_Identity=26.750700280112, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17556745, Length=156, Percent_Identity=31.4102564102564, Blast_Score=91, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6323098, Length=698, Percent_Identity=25.5014326647564, Blast_Score=211, Evalue=4e-55, Organism=Saccharomyces cerevisiae, GI6322359, Length=828, Percent_Identity=24.0338164251208, Blast_Score=179, Evalue=1e-45, Organism=Drosophila melanogaster, GI24582462, Length=697, Percent_Identity=29.2682926829268, Blast_Score=256, Evalue=5e-68, Organism=Drosophila melanogaster, GI221458488, Length=748, Percent_Identity=22.8609625668449, Blast_Score=160, Evalue=3e-39,
Paralogues:
None
Copy number: 1080 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2520 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 7984 Molecules/Cell In: Growth Phase, Gl
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR009022 - InterPro: IPR000795 - InterPro: IPR020568 - InterPro: IPR014721 - InterPro: IPR005225 - InterPro: IPR000640 - InterPro: IPR005517 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00679 EFG_C; PF03764 EFG_IV; PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2 [H]
EC number: 3.6.5.3
Molecular weight: Translated: 75634; Mature: 75503
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGT CCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TVCDFDEAEIRQQRSVGLAVASLAYDGIKVNLVDTPGYADFVGELWAGLRAADCALFVIA EEECCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEE ANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREALTAAQDAFGDKVLPLYLPSG CCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCC DGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQ CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GVPHAELACDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGG CCCCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCC TSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGKLSRAETGDTLSDKAEPLVL CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEE KPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCC GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPE CHHHHHHHHHHCCEEEEEEEEECHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCC GSGFEFLDKVVGGAVPRQFIPSVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSD CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCH FAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAVLGDLSSRRGRVLGTETAGH HHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCCC DRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG CCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC >Mature Secondary Structure ADRVNASQGAAAAPTANGPGGVRNVVLVGPSGGGKTTLIEALLVAAKVLSRPGSVTEGT CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCCCCC TVCDFDEAEIRQQRSVGLAVASLAYDGIKVNLVDTPGYADFVGELWAGLRAADCALFVIA EEECCCHHHHHHHHHHHHHHHHEEECCEEEEEEECCCHHHHHHHHHHCCCCCCEEEEEEE ANEGVDEPTKSLWQECSQVGMPRAVVITKLDHARANYREALTAAQDAFGDKVLPLYLPSG CCCCCCHHHHHHHHHHHHCCCCEEEEEEECHHHHHHHHHHHHHHHHHCCCCEEEEEECCC DGLIGLLSQALYEYADGKRTTRTPAESDTERIEEARGALIEGIIEESEDESLMERYLGGE CCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCC TIDESVLIQDLEKAVARGSFFPVIPVCSSTGVGTLELLEVATRGFPSPMEHPLPEVFTPQ CCCHHHHHHHHHHHHHCCCCCEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCC GVPHAELACDNDAPLLAEVVKTTSDPYVGRVSLVRVFSGTIRPDTTVHVSGHFSSFFGGG CCCCCCEECCCCCHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCEEEEECCHHHHCCCC TSNTHPDHDEDERIGVLSFPLGKQQRPAAAVVAGDICAIGKLSRAETGDTLSDKAEPLVL CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCHHHHCCCCCCCCCCCCCCCCCCEEE KPWTMPEPLLPIAIAAHAKTDEDKLSVGLGRLAAEDPTLRIEQNQETHQVVLWCMGEAHA CCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCC GVVLDTLANRYGVSVDTIELRVPLRETFAGNAKGHGRHIKQSGGHGQYGVCDIEVEPLPE CHHHHHHHHHHCCEEEEEEEEECHHHHHCCCCCCCCCHHHCCCCCCCCEEEEEEEECCCC GSGFEFLDKVVGGAVPRQFIPSVEKGVRAQMDKGVHAGYPVVDIRVTLLDGKAHSVDSSD CCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEEECCCCCCCCCCH FAFQMAGALALREAAAATKVILLEPIDEISVLVPDDFVGAVLGDLSSRRGRVLGTETAGH HHHHHHHHHHHHHHHHHEEEEEECCCCCCEEECCCHHHHHHHHHHHHCCCCEEECCCCCC DRTVIKAEVPQVELTRYAIDLRSLAHGAASFTRSFARYEPMPESAAARVKAGAG CCEEEEECCCCEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: GTP; H2O
Specific reaction: GTP + H2O = GDP + phosphate
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]