Definition | Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome. |
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Accession | NC_008769 |
Length | 4,374,522 |
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The map label for this gene is oxcA [H]
Identifier: 121636031
GI number: 121636031
Start: 171873
End: 173621
Strand: Reverse
Name: oxcA [H]
Synonym: BCG_0152c
Alternate gene names: 121636031
Gene position: 173621-171873 (Counterclockwise)
Preceding gene: 121636033
Following gene: 121636029
Centisome position: 3.97
GC content: 66.72
Gene sequence:
>1749_bases ATGACCACACGATCGGCATCTCCCTGCACAGTGCTGACCGACGGCTGCCACCTGGTGGTGGACGCCCTCAAAGCCAACGA CGTCGACACCATCTACGGCGTTGTCGGCATCCCGATCACCGACCTGGCTCGCGCCGCCCAAGCCTCGGGGATCCGCTATA TCGGTTTCCGCCACGAAGCATCAGCGGGCAATGCGGCGGCCGCCGCGGGGTTCCTCACCGCACGGCCCGGCGTGTGTCTG ACGACGTCCGGCCCCGGCTTTCTCAACGGCCTGCCCGCGCTGGCGAACGCCACCACGAACTGCTTCCCGATGATCCAGAT CTCCGGATCGAGCAGCCGGCCGATGGTCGACCTGCAGCGCGGCGACTATCAGGACCTCGACCAGCTCAACGCCGCTCGAC CGTTCGTGAAGGCGGCGTATCGGATCGGCCAAGTCCAGGACATCGGGCGCGGCGTCGCGCGCGCCATTCGCACCGCGACC TCCGGGCGGCCCGGCGGTGTATACCTCGATATCCCCGGCGATGTGCTGGGCCAGGCCGTTGAGGCATCGGCTGCTTCCGG CGCCATTTGGCGGCCGGTGGACCCGGCTCCCCGACTACTGCCGGCACCGGAGGCGATTGATCGCGCGCTGGACGTGCTCG CCCAAGCGCAGCGACCGCTGCTCGTGCTCGGCAAGGGCGCGGCATATGCGCAGGCCGACAACGTTATTCGGGAGTTTGTG GAGCACACCGGCATTCCCTTCCTGCCGATGTCGATGGCCAAGGGGCTGCTGCCCGACTCACACCCGCAGTCGGCGGCTGC GGCTCGTTCGCTGGCGATGGCCCGCGCCGACGTGGTGCTGCTGGTTGGCGCTCGGCTGAATTGGCTACTAGGCAACGGAG AGTCGCCGCAATGGTCGGCCGATGCCAAGTTCATCCAGGTCGATATCGAGGCGTCGGAGTTTGACAGCAACCGGCCGATC GTGGCACCGCTGACCGGCGACATCGGCTCGGTAATGTCGGCGCTCCTCGAAGCTGCGGCCGATCGTTCGAGCGTGGCCTC GGCGGCGTGGACCGGCGAGCTCGCCGACCGCAAGGCCCGCAACAGTGCCAAGATGCGTCGGCGGTTGGCCGACGATCATC ATCCGATGCGGTTCTACAACGCGCTTGGTGCCATTAGGTCTGTGCTGCAACGCAACCCGGATGTCTATGTGGTCAACGAA GGCGCCAACGCGCTGGACCTCGCCCGCAACATCATCGACATGCACCTACCGCGGCACCGGCTCGACAGCGGAACCTGGGG CGTGATGGGCATCGGCATGGGCTACGCCATCGCGGCCGCCGTCGAGACCGGGCGACCTGTCGTGGCGATCGAGGGCGACA GCGCATTTGGCTTCAGCGGCATGGAGTTCGAGACCATCTGCCGATACCGACTCCCGGTCACCGTCGTCATCCTCAACAAC GGCGGCGTCTACCGCGGCGACGAGGCAACGATCTTTAGGTCGGCCGCCCCGGTGTGGCGACACGACCCAGCGCCCACCGT GCTGAACGCTCATGCACGTCACGAACTGATCGCAGAGGCGTTCGGCGGCAAAGGATATCACGTAAGCACCCCAACCGAAC TGGAGTCGGCGCTGACCGATGCACTGGCATCGAACGGACCGTCACTCATCGACTGCGAACTCGACCCTGCAGACGGGGTG GAGAGCGGCCACCTGGCGAAGCTGAACACTACCAGCGCAGCGACGCCCGCGATCAGCGGCGACGGGTGA
Upstream 100 bases:
>100_bases GCGTCCAATACCGATCCGCTAACGGTTGATAGACCGCGTAAATCGCTGCATAGTGACTCGGTCTTGGACACGGCCGGCGC CCCGGACAACAGTGAACACC
Downstream 100 bases:
>100_bases TCCCCCGCAGCTGCGTGTCAAAGAATTCGTTCAGCGCCAGCGCCTGCGCGCATGTTATGAGCGCTCGGGCAACCGGAGAT CCCGGTCCCAAGGCGTTGGT
Product: putative oxalyl-CoA decarboxylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 582; Mature: 581
Protein sequence:
>582_residues MTTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEASAGNAAAAAGFLTARPGVCL TTSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQRGDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTAT SGRPGGVYLDIPGDVLGQAVEASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLGKGAAYAQADNVIREFV EHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSADAKFIQVDIEASEFDSNRPI VAPLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKARNSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNE GANALDLARNIIDMHLPRHRLDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNN GGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTDALASNGPSLIDCELDPADGV ESGHLAKLNTTSAATPAISGDG
Sequences:
>Translated_582_residues MTTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEASAGNAAAAAGFLTARPGVCL TTSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQRGDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTAT SGRPGGVYLDIPGDVLGQAVEASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLGKGAAYAQADNVIREFV EHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSADAKFIQVDIEASEFDSNRPI VAPLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKARNSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNE GANALDLARNIIDMHLPRHRLDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNN GGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTDALASNGPSLIDCELDPADGV ESGHLAKLNTTSAATPAISGDG >Mature_581_residues TTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEASAGNAAAAAGFLTARPGVCLT TSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQRGDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTATS GRPGGVYLDIPGDVLGQAVEASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLGKGAAYAQADNVIREFVE HTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSADAKFIQVDIEASEFDSNRPIV APLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKARNSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNEG ANALDLARNIIDMHLPRHRLDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNNG GVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTDALASNGPSLIDCELDPADGVE SGHLAKLNTTSAATPAISGDG
Specific function: Oxalic acid catabolism; second step. [C]
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family [H]
Homologues:
Organism=Homo sapiens, GI93004078, Length=559, Percent_Identity=41.6815742397138, Blast_Score=440, Evalue=1e-123, Organism=Homo sapiens, GI21361361, Length=505, Percent_Identity=30.0990099009901, Blast_Score=186, Evalue=6e-47, Organism=Escherichia coli, GI1788716, Length=563, Percent_Identity=59.8579040852576, Blast_Score=668, Evalue=0.0, Organism=Escherichia coli, GI87081685, Length=577, Percent_Identity=27.0363951473137, Blast_Score=176, Evalue=4e-45, Organism=Escherichia coli, GI1790104, Length=559, Percent_Identity=25.4025044722719, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1786717, Length=549, Percent_Identity=26.775956284153, Blast_Score=146, Evalue=4e-36, Organism=Escherichia coli, GI1787096, Length=545, Percent_Identity=25.3211009174312, Blast_Score=100, Evalue=2e-22, Organism=Caenorhabditis elegans, GI17531301, Length=553, Percent_Identity=39.2405063291139, Blast_Score=375, Evalue=1e-104, Organism=Caenorhabditis elegans, GI17531299, Length=553, Percent_Identity=39.2405063291139, Blast_Score=374, Evalue=1e-103, Organism=Caenorhabditis elegans, GI17542570, Length=574, Percent_Identity=28.5714285714286, Blast_Score=190, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320816, Length=552, Percent_Identity=33.5144927536232, Blast_Score=298, Evalue=2e-81, Organism=Saccharomyces cerevisiae, GI6323755, Length=590, Percent_Identity=24.0677966101695, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI19922626, Length=558, Percent_Identity=39.0681003584229, Blast_Score=413, Evalue=1e-115,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017660 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N [H]
EC number: =4.1.1.8 [H]
Molecular weight: Translated: 61142; Mature: 61011
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEA CCCCCCCCCEEEECCCEEEHHHHHCCCCHHHHEEECCCHHHHHHHHHHCCEEEEEEEECC SAGNAAAAAGFLTARPGVCLTTSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQR CCCCHHHHHHHEECCCCEEEEECCCCHHCCCCHHHCCCCCCEEEEEECCCCCCCEEEECC GDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTATSGRPGGVYLDIPGDVLGQAV CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH EASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLGKGAAYAQADNVIREFV HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH EHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSA HHCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCCCC DAKFIQVDIEASEFDSNRPIVAPLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKAR CCEEEEEEEEHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH NSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNEGANALDLARNIIDMHLPRHR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHH LDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNN CCCCCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHEEECCEEEEEECC GGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTD CCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH ALASNGPSLIDCELDPADGVESGHLAKLNTTSAATPAISGDG HHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCC >Mature Secondary Structure TTRSASPCTVLTDGCHLVVDALKANDVDTIYGVVGIPITDLARAAQASGIRYIGFRHEA CCCCCCCCEEEECCCEEEHHHHHCCCCHHHHEEECCCHHHHHHHHHHCCEEEEEEEECC SAGNAAAAAGFLTARPGVCLTTSGPGFLNGLPALANATTNCFPMIQISGSSSRPMVDLQR CCCCHHHHHHHEECCCCEEEEECCCCHHCCCCHHHCCCCCCEEEEEECCCCCCCEEEECC GDYQDLDQLNAARPFVKAAYRIGQVQDIGRGVARAIRTATSGRPGGVYLDIPGDVLGQAV CCHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCEEEECCHHHHHHHH EASAASGAIWRPVDPAPRLLPAPEAIDRALDVLAQAQRPLLVLGKGAAYAQADNVIREFV HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHHH EHTGIPFLPMSMAKGLLPDSHPQSAAAARSLAMARADVVLLVGARLNWLLGNGESPQWSA HHCCCCEEHHHHHHCCCCCCCCHHHHHHHHHHHHHHCEEEEECCCEEEEECCCCCCCCCC DAKFIQVDIEASEFDSNRPIVAPLTGDIGSVMSALLEAAADRSSVASAAWTGELADRKAR CCEEEEEEEEHHHCCCCCCEEEECCCCHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHH NSAKMRRRLADDHHPMRFYNALGAIRSVLQRNPDVYVVNEGANALDLARNIIDMHLPRHR HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHCCCHHH LDSGTWGVMGIGMGYAIAAAVETGRPVVAIEGDSAFGFSGMEFETICRYRLPVTVVILNN CCCCCCEEEECCHHHHHHHHHHCCCEEEEEECCCCCCCCCCCHHHHHEEECCEEEEEECC GGVYRGDEATIFRSAAPVWRHDPAPTVLNAHARHELIAEAFGGKGYHVSTPTELESALTD CCEEECCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHH ALASNGPSLIDCELDPADGVESGHLAKLNTTSAATPAISGDG HHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]