| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121610340
Identifier: 121610340
GI number: 121610340
Start: 3779548
End: 3780015
Strand: Direct
Name: 121610340
Synonym: Veis_3408
Alternate gene names: NA
Gene position: 3779548-3780015 (Clockwise)
Preceding gene: 121610339
Following gene: 121610341
Centisome position: 67.9
GC content: 63.25
Gene sequence:
>468_bases ATGACAGCCACCCGACCGTTCAAGGTTCTGGGCATACAGCAAGTCGCCATCGGCGGCACCGACAAGCAGCGCATGAAAGC CCTGTGGGTCGACATGCTGGGCCTGACCCCCAGGGGCAGTTTCCAAAGCGAGCGTGAAAACGTCGATGAAGACATCCTGT CCATGGGCCGCAATGCGCACCAGGTCGAGGTCGACCTGATGCAACCGCTGGACATCAGCAAAAAACCCGCCGTGCACAGC CCGCCGCTGAACCACATCGGCCTGTGGATCGACGACTTGCCCCGGGCCGTGCAATGGCTCAGCGCCCGGGGCGTGCGCTT TGCCCCGGGCGGCATCCGCAAGGGCGCTGCAGGCCATGACATTACCTTTTTGCACCCGAAAAGCAACGACGAGTTCCCGA TTGCCGGCGAGGGCGTATTGATCGAACTGGTGCAGGCGCCCGCCGAGGTGATCGAGGCGCTGGGTTGA
Upstream 100 bases:
>100_bases CGAACTGGTCAAGAAATCCGGTGCGATGGCCGACTGAGCCGATTCACTTGCGCAGACTGATATTAAAAACATGGCGAACA TCTCGAAAGCGGAGAATCCG
Downstream 100 bases:
>100_bases GGGCTGAGGTTGACTTTGATGGTTGAGGCCGGCGTGTGCCAACACCAGGACATGGCTGGCAGCGCATCGAGCGCATCGAT TGGATCGACCCGAATCCAAT
Product: lactoylglutathione lyase
Products: glutathione; methylglyoxal
Alternate protein names: Methylmalonyl-CoA Epimerase; Glyoxalase/Bleomycin Resistance Protein/Dioxygenase
Number of amino acids: Translated: 155; Mature: 154
Protein sequence:
>155_residues MTATRPFKVLGIQQVAIGGTDKQRMKALWVDMLGLTPRGSFQSERENVDEDILSMGRNAHQVEVDLMQPLDISKKPAVHS PPLNHIGLWIDDLPRAVQWLSARGVRFAPGGIRKGAAGHDITFLHPKSNDEFPIAGEGVLIELVQAPAEVIEALG
Sequences:
>Translated_155_residues MTATRPFKVLGIQQVAIGGTDKQRMKALWVDMLGLTPRGSFQSERENVDEDILSMGRNAHQVEVDLMQPLDISKKPAVHS PPLNHIGLWIDDLPRAVQWLSARGVRFAPGGIRKGAAGHDITFLHPKSNDEFPIAGEGVLIELVQAPAEVIEALG >Mature_154_residues TATRPFKVLGIQQVAIGGTDKQRMKALWVDMLGLTPRGSFQSERENVDEDILSMGRNAHQVEVDLMQPLDISKKPAVHSP PLNHIGLWIDDLPRAVQWLSARGVRFAPGGIRKGAAGHDITFLHPKSNDEFPIAGEGVLIELVQAPAEVIEALG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.4.1.5
Molecular weight: Translated: 16918; Mature: 16787
Theoretical pI: Translated: 6.35; Mature: 6.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATRPFKVLGIQQVAIGGTDKQRMKALWVDMLGLTPRGSFQSERENVDEDILSMGRNAH CCCCCCEEEECEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCCCCE QVEVDLMQPLDISKKPAVHSPPLNHIGLWIDDLPRAVQWLSARGVRFAPGGIRKGAAGHD EEEEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC ITFLHPKSNDEFPIAGEGVLIELVQAPAEVIEALG EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure TATRPFKVLGIQQVAIGGTDKQRMKALWVDMLGLTPRGSFQSERENVDEDILSMGRNAH CCCCCEEEECEEEEEECCCCHHHHHHHHHHHHCCCCCCCCCHHHHCHHHHHHHCCCCCE QVEVDLMQPLDISKKPAVHSPPLNHIGLWIDDLPRAVQWLSARGVRFAPGGIRKGAAGHD EEEEEEECCCCCCCCCCCCCCCCCHHCCCHHHHHHHHHHHHHCCCEECCCCCCCCCCCCC ITFLHPKSNDEFPIAGEGVLIELVQAPAEVIEALG EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: (R)-S-lactoylglutathione
Specific reaction: (R)-S-lactoylglutathione = glutathione + methylglyoxal
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA