Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610338

Identifier: 121610338

GI number: 121610338

Start: 3777524

End: 3778492

Strand: Direct

Name: 121610338

Synonym: Veis_3406

Alternate gene names: NA

Gene position: 3777524-3778492 (Clockwise)

Preceding gene: 121610337

Following gene: 121610339

Centisome position: 67.86

GC content: 65.22

Gene sequence:

>969_bases
ATGCGCTGCATCCCGCTGTTGATAGCCCTGCTCAGCCCGATAGCCGCCGGGGCCCAGGCCATCGAATGGCCGGGCGCCAA
GAGCATCGTCTACATCGTGCCTTTTACCGCCGGCGGCACGACCGACACCATAGGCCGCACATTGGCGCACAAGCTCGGCG
AGAGCCTGCGCCAGACGGTAGTGATCGAAAACAGGCCCGGCCAGGCCGGCGGCATCGGCGCCGCCTACGTCGCCCGGGCC
GCAGCCGACGGCTACACGCTGTTCGGCGGCACCATCAGCACGCACGCCATCAACGCCAGCCTGTACAAGAAGCTGCCCTA
CGACCCGATGAAAGACTTCGAGCCCGTCGCGCTGGTCGGGCGCCTGCCCAACGTGCTCCTCGTCAACAGCCAGCTTGGCC
TGAACTCGGTGGCCGACCTGGTCGCGCTGCTGAAAAAGGACGAGAGCAAGCGCAGTTTCGCCTCCTCCGGTGCCGGCGCG
TCCTCCCACCTGGCGGGCGAAATGTTCGCCAACTTCGTCGGCGTCAAACTCACGCACATCCCGTACAAAGGCAGCCCCCC
GGCCCTGAACGACGTGGCCGCAGGGCGGGTGCCGATGATGTTCGACCAGGTGACCGCCGCGCTGCCACTGGTCAGAAGCG
GCAAACTCAAACTGCTCGCCGTGACCACAGGCCAGCGCATCGCGTTGCTGCCCGAGTTGCCGACCATGATCGAATCGGGC
GTCACCGGCTTCGAGATGTCATCGTGGCAGGCGGTATACGCGCCCAAGGGCACGCCCGAAGCCATCGTGCAGCGCCTGAA
CGCCGAGATCGTGAAGGCGCTGCAACAGCCCGATGTGCAGGCCAAGTTCTCGAACCAGTTGGCCATGGAGATCGTTGGCA
GCACCCCGCAGGAACTGCGCGAGTACATGGCCAAGGAAATTCCGCGCTGGGCTGAACTGGTCCAAAAATCAGGCGCGATG
GCCGATTGA

Upstream 100 bases:

>100_bases
GCCTGGCGCCAGGCCAGGGGCCGCTGAGGCCCCGCGAGAGCCTGCCCAGGCCCGTTCCGGCCCGATCCATCTCGATCCAT
TTCGAGGAGACGACACCATC

Downstream 100 bases:

>100_bases
GGAAAGACCGAGGAGACCCATCCATGCGCTGCATCCCGTTATTGCTGGCCCTGCTCAGCCCGGTCGCCACCTGGGCCCAA
GCCGTCGAATGGCCGGGCGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MRCIPLLIALLSPIAAGAQAIEWPGAKSIVYIVPFTAGGTTDTIGRTLAHKLGESLRQTVVIENRPGQAGGIGAAYVARA
AADGYTLFGGTISTHAINASLYKKLPYDPMKDFEPVALVGRLPNVLLVNSQLGLNSVADLVALLKKDESKRSFASSGAGA
SSHLAGEMFANFVGVKLTHIPYKGSPPALNDVAAGRVPMMFDQVTAALPLVRSGKLKLLAVTTGQRIALLPELPTMIESG
VTGFEMSSWQAVYAPKGTPEAIVQRLNAEIVKALQQPDVQAKFSNQLAMEIVGSTPQELREYMAKEIPRWAELVQKSGAM
AD

Sequences:

>Translated_322_residues
MRCIPLLIALLSPIAAGAQAIEWPGAKSIVYIVPFTAGGTTDTIGRTLAHKLGESLRQTVVIENRPGQAGGIGAAYVARA
AADGYTLFGGTISTHAINASLYKKLPYDPMKDFEPVALVGRLPNVLLVNSQLGLNSVADLVALLKKDESKRSFASSGAGA
SSHLAGEMFANFVGVKLTHIPYKGSPPALNDVAAGRVPMMFDQVTAALPLVRSGKLKLLAVTTGQRIALLPELPTMIESG
VTGFEMSSWQAVYAPKGTPEAIVQRLNAEIVKALQQPDVQAKFSNQLAMEIVGSTPQELREYMAKEIPRWAELVQKSGAM
AD
>Mature_322_residues
MRCIPLLIALLSPIAAGAQAIEWPGAKSIVYIVPFTAGGTTDTIGRTLAHKLGESLRQTVVIENRPGQAGGIGAAYVARA
AADGYTLFGGTISTHAINASLYKKLPYDPMKDFEPVALVGRLPNVLLVNSQLGLNSVADLVALLKKDESKRSFASSGAGA
SSHLAGEMFANFVGVKLTHIPYKGSPPALNDVAAGRVPMMFDQVTAALPLVRSGKLKLLAVTTGQRIALLPELPTMIESG
VTGFEMSSWQAVYAPKGTPEAIVQRLNAEIVKALQQPDVQAKFSNQLAMEIVGSTPQELREYMAKEIPRWAELVQKSGAM
AD

Specific function: Unknown

COG id: COG3181

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0065 (bug) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005064 [H]

Pfam domain/function: PF03401 Bug [H]

EC number: NA

Molecular weight: Translated: 34134; Mature: 34134

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRCIPLLIALLSPIAAGAQAIEWPGAKSIVYIVPFTAGGTTDTIGRTLAHKLGESLRQTV
CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEE
VIENRPGQAGGIGAAYVARAAADGYTLFGGTISTHAINASLYKKLPYDPMKDFEPVALVG
EEECCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RLPNVLLVNSQLGLNSVADLVALLKKDESKRSFASSGAGASSHLAGEMFANFVGVKLTHI
CCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEC
PYKGSPPALNDVAAGRVPMMFDQVTAALPLVRSGKLKLLAVTTGQRIALLPELPTMIESG
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHCC
VTGFEMSSWQAVYAPKGTPEAIVQRLNAEIVKALQQPDVQAKFSNQLAMEIVGSTPQELR
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
EYMAKEIPRWAELVQKSGAMAD
HHHHHHCHHHHHHHHHCCCCCC
>Mature Secondary Structure
MRCIPLLIALLSPIAAGAQAIEWPGAKSIVYIVPFTAGGTTDTIGRTLAHKLGESLRQTV
CCHHHHHHHHHHHHHCCCCEECCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHEE
VIENRPGQAGGIGAAYVARAAADGYTLFGGTISTHAINASLYKKLPYDPMKDFEPVALVG
EEECCCCCCCCCHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHH
RLPNVLLVNSQLGLNSVADLVALLKKDESKRSFASSGAGASSHLAGEMFANFVGVKLTHI
CCCCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCEEEEEC
PYKGSPPALNDVAAGRVPMMFDQVTAALPLVRSGKLKLLAVTTGQRIALLPELPTMIESG
CCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCEEEECCCHHHHHHCC
VTGFEMSSWQAVYAPKGTPEAIVQRLNAEIVKALQQPDVQAKFSNQLAMEIVGSTPQELR
CCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHH
EYMAKEIPRWAELVQKSGAMAD
HHHHHHCHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2013566 [H]