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The map label for this gene is tnpA [H]

Identifier: 121610284

GI number: 121610284

Start: 3726075

End: 3726560

Strand: Direct

Name: tnpA [H]

Synonym: Veis_3347

Alternate gene names: 121610284

Gene position: 3726075-3726560 (Clockwise)

Preceding gene: 121610283

Following gene: 121610285

Centisome position: 66.93

GC content: 66.67

Gene sequence:

>486_bases
GTGACGGCCTCGCTGATGCTGCGCAAGCTCGGCAGCTATCCGCGTCAGAACGGCCTGGCCGTGGCGCTGCGCGAGCTGGG
CCGTATCGAGCGCACGCTGTTCATCCTGGACTGGCTGCAAGGCGTCGAGTTGCGCCGCCGGGTGCATGCCGGGCTGAACA
AGGGGGAAGCGCGCAACGCGCTGGCCCGCGCCGTGTTCTTCAACCGCCTGGGCGAAATCCGCGACCGCAGTTTCGAGCAG
CAGCGCTACCGTGCCAGCGGCCTCAATCTGGTGACGGCGGCCATCGTGTTGTGGAACACGGTCTATCTGGAGCGGGCAGC
GCATGGGCTGCGTGGCAACGGTCATGTCGTGGATGATGCGCTGTTGCAGTACCTGTCGCCGTTGGGCTGGGAGCACATCA
ACCTGACCGGCGATTACCTCTGGCGCAGCAGCGCCAAGGTCGGCGCGGGCAAGTTCCGACCGCTACGACCACTGCCACCG
GCTTAG

Upstream 100 bases:

>100_bases
AATCCCTTGCGGGCCATGTCCACCCCGATCATGTAATCGGCCTTGGACACGTCCATAGACGCGCCAAAACGCGCATTCCA
CCTCGATCAAGCAGGGCACA

Downstream 100 bases:

>100_bases
CGTGCTTTATTTTCCGTTTTCTGAGACGACCCCGATGAGACTGAAACGCCTTACCCCGCAAGCCTTTGACCGCGCTGCCG
CCGACACCCGCATGGGCGAC

Product: transposase Tn3

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQGVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQ
QRYRASGLNLVTAAIVLWNTVYLERAAHGLRGNGHVVDDALLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPP
A

Sequences:

>Translated_161_residues
MTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQGVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQ
QRYRASGLNLVTAAIVLWNTVYLERAAHGLRGNGHVVDDALLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPP
A
>Mature_160_residues
TASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQGVELRRRVHAGLNKGEARNALARAVFFNRLGEIRDRSFEQQ
RYRASGLNLVTAAIVLWNTVYLERAAHGLRGNGHVVDDALLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA

Specific function: Required for transposition of transposon Tn21 [H]

COG id: COG4644

COG function: function code L; Transposase and inactivated derivatives, TnpA family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transposase 7 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002513 [H]

Pfam domain/function: PF01526 Transposase_7 [H]

EC number: NA

Molecular weight: Translated: 18185; Mature: 18054

Theoretical pI: Translated: 11.51; Mature: 11.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQGVELRRRVHAGLNKGEARNA
CCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHGLRGNGHVVDDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
HHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TASLMLRKLGSYPRQNGLAVALRELGRIERTLFILDWLQGVELRRRVHAGLNKGEARNA
CHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
LARAVFFNRLGEIRDRSFEQQRYRASGLNLVTAAIVLWNTVYLERAAHGLRGNGHVVDDA
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH
LLQYLSPLGWEHINLTGDYLWRSSAKVGAGKFRPLRPLPPA
HHHHHHHCCCCEECCCHHHHHHCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3029727; 2992807; 6312271 [H]