| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is yafQ [C]
Identifier: 121610283
GI number: 121610283
Start: 3725459
End: 3725761
Strand: Direct
Name: yafQ [C]
Synonym: Veis_3345
Alternate gene names: 121610283
Gene position: 3725459-3725761 (Clockwise)
Preceding gene: 121610282
Following gene: 121610284
Centisome position: 66.92
GC content: 60.07
Gene sequence:
>303_bases ATGCGGAAGATTGAGCCGACAACTGCATTCAAGCGGGATTTCAAGCGAGAGGGAAAAGGGCCACACCGCGCCGTGTTGGA CACCGATTTGAAGCAGGTCATCACGGCCTTGGCGAACGATGTACCGCTTGCAGTGAAGCACCGAGACCACCCCCTGACTG GCAACTGGAAGGACTACCGCGACTGCCACGTCCGCCCCGATTTGGTGTTGATCTATCGGCTCATGGATGGCGACGGTACA GAGGACAACCCCGCCCGTCTTGTGCTGGCGCGGCTTGGCGCGCATTCGGAGCTGGACCTCTGA
Upstream 100 bases:
>100_bases CTGTTCCAGCCCAACGCCGAAACGCTGGCAGCCTTCGCCGAGGTCGAGCGCGGTGGCCTCCAGCGGTTTGATTCGGTTGA TGCTCTGTTCGCCGATCTTC
Downstream 100 bases:
>100_bases CGGTCACATGCCCATGCTGGGGCCGCTGTCCCTCTCGCGCCTGCTGCTGCGCTGCTGGGCTTCCTTGGCCTGTTCCTGCT GGTACTTGACCGCCTCGGGA
Product: addiction module antitoxin
Products: NA
Alternate protein names: Addiction Module Antitoxin; Addiction Module xin; Xin-Antitoxin System Toxin Component RelE Family; Addiction Module xin Rele/Stbe Family; Plasmid Stabilisation System Protein; StbE/RelE-Family Protein; RelE xin-Like Protein; Plasmid Stabilization System Protein/Addiction Module xin
Number of amino acids: Translated: 100; Mature: 100
Protein sequence:
>100_residues MRKIEPTTAFKRDFKREGKGPHRAVLDTDLKQVITALANDVPLAVKHRDHPLTGNWKDYRDCHVRPDLVLIYRLMDGDGT EDNPARLVLARLGAHSELDL
Sequences:
>Translated_100_residues MRKIEPTTAFKRDFKREGKGPHRAVLDTDLKQVITALANDVPLAVKHRDHPLTGNWKDYRDCHVRPDLVLIYRLMDGDGT EDNPARLVLARLGAHSELDL >Mature_100_residues MRKIEPTTAFKRDFKREGKGPHRAVLDTDLKQVITALANDVPLAVKHRDHPLTGNWKDYRDCHVRPDLVLIYRLMDGDGT EDNPARLVLARLGAHSELDL
Specific function: Unknown
COG id: COG3041
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1786419, Length=98, Percent_Identity=38.7755102040816, Blast_Score=61, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11395; Mature: 11395
Theoretical pI: Translated: 8.52; Mature: 8.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIEPTTAFKRDFKREGKGPHRAVLDTDLKQVITALANDVPLAVKHRDHPLTGNWKDYR CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC DCHVRPDLVLIYRLMDGDGTEDNPARLVLARLGAHSELDL CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRKIEPTTAFKRDFKREGKGPHRAVLDTDLKQVITALANDVPLAVKHRDHPLTGNWKDYR CCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCC DCHVRPDLVLIYRLMDGDGTEDNPARLVLARLGAHSELDL CCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA