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The map label for this gene is 121610270

Identifier: 121610270

GI number: 121610270

Start: 3714312

End: 3715646

Strand: Direct

Name: 121610270

Synonym: Veis_3329

Alternate gene names: NA

Gene position: 3714312-3715646 (Clockwise)

Preceding gene: 121610269

Following gene: 121610271

Centisome position: 66.72

GC content: 69.06

Gene sequence:

>1335_bases
ATGACGACCATGACCGACACCGCCGCCACCAGCACCACCAACGCAACCAACGCCCACTTCACCGACCCGCTGCTGGGCAG
CAACTTCAAGGGCTACCCGCGCACCCAGCCGCCGCGCCTGCGCAGCGAAGTCGGCGCCGCCGGCTGGAACATGCTGGCCG
GCGACCTGCCGCTGCCGCTGGCGATGCTCAAGCGCGAGGCGCTGGAGCACAACCTGGCGTGGATGCAGTCGCGCGTGCGC
GAGTGGGGCATCGACCTCGCGCCGCACGGCAAGACCAGCATGTCGCCGCAGCTCTTCCAGCGCCAGTTGAAGGCGGGTGC
CTGGGGCCTGACCTTCGCGACCGTCACGCAACTGGCCGTGGGCGTGGCGGCCGGCGTGCGCCGCACGCTCATCGCCAACC
AGGTGGTGAGCGACGAAGACCTCGCGGGCATCCAGATGCTGCTGCGTGCGACGGCGGGCCTGCGCATCGTGTTCCTGGTC
GATTCGCTGGCGCAGCTCGGTCTCATAGAAGACTGGGCCAGGCGCCATCCGGCAAGCGTGCCGTTCGAAGTGATGATCGA
GATCGGCGTCGAAGGCGCGCGCACCGGTTGCCGCACGCATGAACAAGCGGTGACGCTCGCCACGCGCCTGCGTGCGAGCG
ATGCGGTCAAGCTCGTCGGCATCGAAACCTATGAAGGGCAGGGCGCTACTGGCGTCAGCGAACCCGACACCGCGTATGCC
AACACGCTGATGGACCGCGTGGAAGCCATCGCGCGCCACTGCGATACGCACAAGCTCTTCGAGACTGACGAGGTGCTGGT
CTCGGCCGGCGGTTCGGCGATCTTCGACCTCGTGGCCGGACGCCTGAAGCCCGCGCTGGGCTCGCCGGTGCGCGGCCTGC
TGCGCGCGGGCTGCTACGTCACGCACGACCACGGCTTCTACCAGCGCATGGTGAGCGCGCTCGACGAGCGCCTGGGCTGC
CAATGCGGCGAGGGCCTGCGCCCTGCGATGGAAGTGTGGGCCACGGTGCAATCGCGCCCCGAGCCAGGTCTGGCGATCCT
CGCCGTGGGCAAGCGCGACATCTCGTTCGACCTCTCGATGCCCGTGCCCATCGCGCGCGCGGCGCGTGGCGCGCTCGAAG
CGCAGGCCGTACCCGCTGGCTGGAAGATCACCGCGCTCAACGACCAGCACGCCTACCTGCGCTGGGACGCCAGCGAGGAA
GCGGAGGCCCCCCAGGTCGGCGACCGTGTCGGCCTCGGCATCTCGCATCCCTGCACCACCTTCGACAAATGGCACTGGAT
GCCCATCGTCGAGAACGACTACCGCGTGAGCGACGCCGTCGCCATGCATTTCTGA

Upstream 100 bases:

>100_bases
CCATCGAAGCCTGCGCGCAGACCGTGCCATCGCTCGACGAGATATCTCCCGGACACTACAGCGCCTGCATCCGCAAGGAA
CGACTCTCCCACATCACCGC

Downstream 100 bases:

>100_bases
ACCGCTTGCACCGATGACCCCCTGCCTGCTTCAGAAGATCGCGCAGATCCGCAGCGGCGCCCCGGCCACGCGGCGCGCGA
TTCTCGAGCTGATCCTGGAA

Product: D-serine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 444; Mature: 443

Protein sequence:

>444_residues
MTTMTDTAATSTTNATNAHFTDPLLGSNFKGYPRTQPPRLRSEVGAAGWNMLAGDLPLPLAMLKREALEHNLAWMQSRVR
EWGIDLAPHGKTSMSPQLFQRQLKAGAWGLTFATVTQLAVGVAAGVRRTLIANQVVSDEDLAGIQMLLRATAGLRIVFLV
DSLAQLGLIEDWARRHPASVPFEVMIEIGVEGARTGCRTHEQAVTLATRLRASDAVKLVGIETYEGQGATGVSEPDTAYA
NTLMDRVEAIARHCDTHKLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRAGCYVTHDHGFYQRMVSALDERLGC
QCGEGLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSMPVPIARAARGALEAQAVPAGWKITALNDQHAYLRWDASEE
AEAPQVGDRVGLGISHPCTTFDKWHWMPIVENDYRVSDAVAMHF

Sequences:

>Translated_444_residues
MTTMTDTAATSTTNATNAHFTDPLLGSNFKGYPRTQPPRLRSEVGAAGWNMLAGDLPLPLAMLKREALEHNLAWMQSRVR
EWGIDLAPHGKTSMSPQLFQRQLKAGAWGLTFATVTQLAVGVAAGVRRTLIANQVVSDEDLAGIQMLLRATAGLRIVFLV
DSLAQLGLIEDWARRHPASVPFEVMIEIGVEGARTGCRTHEQAVTLATRLRASDAVKLVGIETYEGQGATGVSEPDTAYA
NTLMDRVEAIARHCDTHKLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRAGCYVTHDHGFYQRMVSALDERLGC
QCGEGLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSMPVPIARAARGALEAQAVPAGWKITALNDQHAYLRWDASEE
AEAPQVGDRVGLGISHPCTTFDKWHWMPIVENDYRVSDAVAMHF
>Mature_443_residues
TTMTDTAATSTTNATNAHFTDPLLGSNFKGYPRTQPPRLRSEVGAAGWNMLAGDLPLPLAMLKREALEHNLAWMQSRVRE
WGIDLAPHGKTSMSPQLFQRQLKAGAWGLTFATVTQLAVGVAAGVRRTLIANQVVSDEDLAGIQMLLRATAGLRIVFLVD
SLAQLGLIEDWARRHPASVPFEVMIEIGVEGARTGCRTHEQAVTLATRLRASDAVKLVGIETYEGQGATGVSEPDTAYAN
TLMDRVEAIARHCDTHKLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRAGCYVTHDHGFYQRMVSALDERLGCQ
CGEGLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSMPVPIARAARGALEAQAVPAGWKITALNDQHAYLRWDASEEA
EAPQVGDRVGLGISHPCTTFDKWHWMPIVENDYRVSDAVAMHF

Specific function: Catalyzes the reversible cleavage of D-theronine or D- allothreonine into glycine and acetaldehyde. Can also cleave D- beta-phenylserine, D-beta-hydroxy-alpha-aminovaleric acid, D-beta- 3,4-dihydroxyphenylserine and D-beta-3,4- methylenedioxyphenylserine

COG id: COG3616

COG function: function code E; Predicted amino acid aldolase or racemase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the DSD1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001608 [H]

Pfam domain/function: PF01168 Ala_racemase_N [H]

EC number: =4.1.2.42 [H]

Molecular weight: Translated: 48166; Mature: 48034

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTMTDTAATSTTNATNAHFTDPLLGSNFKGYPRTQPPRLRSEVGAAGWNMLAGDLPLPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCH
AMLKREALEHNLAWMQSRVREWGIDLAPHGKTSMSPQLFQRQLKAGAWGLTFATVTQLAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GVAAGVRRTLIANQVVSDEDLAGIQMLLRATAGLRIVFLVDSLAQLGLIEDWARRHPASV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCHHHHHHHHCCCCC
PFEVMIEIGVEGARTGCRTHEQAVTLATRLRASDAVKLVGIETYEGQGATGVSEPDTAYA
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHH
NTLMDRVEAIARHCDTHKLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRAGCYV
HHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
THDHGFYQRMVSALDERLGCQCGEGLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSM
EECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCC
PVPIARAARGALEAQAVPAGWKITALNDQHAYLRWDASEEAEAPQVGDRVGLGISHPCTT
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
FDKWHWMPIVENDYRVSDAVAMHF
CCCEEEEEEECCCCCCCCCCEECC
>Mature Secondary Structure 
TTMTDTAATSTTNATNAHFTDPLLGSNFKGYPRTQPPRLRSEVGAAGWNMLAGDLPLPL
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHCCCCCCCH
AMLKREALEHNLAWMQSRVREWGIDLAPHGKTSMSPQLFQRQLKAGAWGLTFATVTQLAV
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHH
GVAAGVRRTLIANQVVSDEDLAGIQMLLRATAGLRIVFLVDSLAQLGLIEDWARRHPASV
HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCEEEHHHHHHHHHCHHHHHHHHCCCCC
PFEVMIEIGVEGARTGCRTHEQAVTLATRLRASDAVKLVGIETYEGQGATGVSEPDTAYA
CCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCHHHH
NTLMDRVEAIARHCDTHKLFETDEVLVSAGGSAIFDLVAGRLKPALGSPVRGLLRAGCYV
HHHHHHHHHHHHHCCCHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHCCCEE
THDHGFYQRMVSALDERLGCQCGEGLRPAMEVWATVQSRPEPGLAILAVGKRDISFDLSM
EECCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCEEECCC
PVPIARAARGALEAQAVPAGWKITALNDQHAYLRWDASEEAEAPQVGDRVGLGISHPCTT
CCCHHHHHHHHHHHCCCCCCEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCC
FDKWHWMPIVENDYRVSDAVAMHF
CCCEEEEEEECCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9642221 [H]