Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
---|---|
Accession | NC_008786 |
Length | 5,566,749 |
Click here to switch to the map view.
The map label for this gene is 121610242
Identifier: 121610242
GI number: 121610242
Start: 3684078
End: 3684614
Strand: Direct
Name: 121610242
Synonym: Veis_3301
Alternate gene names: NA
Gene position: 3684078-3684614 (Clockwise)
Preceding gene: 121610241
Following gene: 121610243
Centisome position: 66.18
GC content: 63.13
Gene sequence:
>537_bases TTGCTCATGTATCCGGCCATGATGAACCCCCTGGACAGAGACCTGCCAATGCGACTAGTGTCGCGTCACCGATCAGATGT CGTAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCATCGCGCCGCCCATACCGAGCGTATTGGCAAGCGATGCAA CGCCGCGATGCGCTTCGATGGCCAGCGCAGACAGACAGATGATCGGTGACGCGACACTAGAGCCTGTGGCAACCCCGCGA CTGGATCTCCGTCATGTCCTGATGCGTGACAGACTGTCTCCAATCTGGTGCTGCGCTCGGCATGGTTTCGGAAATCGCCC TGGATTCGGCAAAGACAAGGCAAGGCTGAACAAGCCCCCAACGACCAAGCCTGCGCCCGGGCCGGCGCGGATGCAAGGCG AAAGCCAGACAATGGTCATGACCACGGCCATGGCGGGGGTTTGCAATGCCGCAAACGCCCCCGGGACGGGACGCGCGGTG CGTGGGGAACCTGGTTCACGCAGCCATGACGGCCCGATTCGGTTGGCCTGCGCATGA
Upstream 100 bases:
>100_bases CCTCCCCAAAACCGGAAGCCGGTCCACGGTGCAGCCCTCGCGTCGGCGCGAAATCGTGGCCAGGTGTTGGCCTGCCGGCG ACTGCGGCGTGGCATAAGCG
Downstream 100 bases:
>100_bases GGCTGAAGAATCGCCTGGCGTTGGTCATAGTGCTGTTCCTGTCAACCTTTGTCGGCTGCTATAGCCTGTTGCTGTTACTG GAAGTCCCCGAGCGTGCCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 178
Protein sequence:
>178_residues MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV RGEPGSRSHDGPIRLACA
Sequences:
>Translated_178_residues MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV RGEPGSRSHDGPIRLACA >Mature_178_residues MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV RGEPGSRSHDGPIRLACA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19093; Mature: 19093
Theoretical pI: Translated: 11.01; Mature: 11.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 6.7 %Met (Translated Protein) 10.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 10.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASM CCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHH ASADRQMIGDATLEPVATPRLDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCCCC TTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAVRGEPGSRSHDGPIRLACA CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEC >Mature Secondary Structure MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASM CCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHH ASADRQMIGDATLEPVATPRLDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPP HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCCCC TTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAVRGEPGSRSHDGPIRLACA CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA