Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610242

Identifier: 121610242

GI number: 121610242

Start: 3684078

End: 3684614

Strand: Direct

Name: 121610242

Synonym: Veis_3301

Alternate gene names: NA

Gene position: 3684078-3684614 (Clockwise)

Preceding gene: 121610241

Following gene: 121610243

Centisome position: 66.18

GC content: 63.13

Gene sequence:

>537_bases
TTGCTCATGTATCCGGCCATGATGAACCCCCTGGACAGAGACCTGCCAATGCGACTAGTGTCGCGTCACCGATCAGATGT
CGTAGGCTGCGCGCAGCCATCGGAGCGCAGCGCAAGGCGCATCGCGCCGCCCATACCGAGCGTATTGGCAAGCGATGCAA
CGCCGCGATGCGCTTCGATGGCCAGCGCAGACAGACAGATGATCGGTGACGCGACACTAGAGCCTGTGGCAACCCCGCGA
CTGGATCTCCGTCATGTCCTGATGCGTGACAGACTGTCTCCAATCTGGTGCTGCGCTCGGCATGGTTTCGGAAATCGCCC
TGGATTCGGCAAAGACAAGGCAAGGCTGAACAAGCCCCCAACGACCAAGCCTGCGCCCGGGCCGGCGCGGATGCAAGGCG
AAAGCCAGACAATGGTCATGACCACGGCCATGGCGGGGGTTTGCAATGCCGCAAACGCCCCCGGGACGGGACGCGCGGTG
CGTGGGGAACCTGGTTCACGCAGCCATGACGGCCCGATTCGGTTGGCCTGCGCATGA

Upstream 100 bases:

>100_bases
CCTCCCCAAAACCGGAAGCCGGTCCACGGTGCAGCCCTCGCGTCGGCGCGAAATCGTGGCCAGGTGTTGGCCTGCCGGCG
ACTGCGGCGTGGCATAAGCG

Downstream 100 bases:

>100_bases
GGCTGAAGAATCGCCTGGCGTTGGTCATAGTGCTGTTCCTGTCAACCTTTGTCGGCTGCTATAGCCTGTTGCTGTTACTG
GAAGTCCCCGAGCGTGCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 178; Mature: 178

Protein sequence:

>178_residues
MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR
LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV
RGEPGSRSHDGPIRLACA

Sequences:

>Translated_178_residues
MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR
LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV
RGEPGSRSHDGPIRLACA
>Mature_178_residues
MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASMASADRQMIGDATLEPVATPR
LDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPPTTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAV
RGEPGSRSHDGPIRLACA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19093; Mature: 19093

Theoretical pI: Translated: 11.01; Mature: 11.01

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
6.7 %Met     (Translated Protein)
10.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
6.7 %Met     (Mature Protein)
10.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASM
CCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHH
ASADRQMIGDATLEPVATPRLDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCCCC
TTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAVRGEPGSRSHDGPIRLACA
CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEC
>Mature Secondary Structure
MLMYPAMMNPLDRDLPMRLVSRHRSDVVGCAQPSERSARRIAPPIPSVLASDATPRCASM
CCCCCCCCCCCCCCHHHHHHHHHHHCEECCCCCCHHHHHHCCCCCHHHHHCCCCCHHHHH
ASADRQMIGDATLEPVATPRLDLRHVLMRDRLSPIWCCARHGFGNRPGFGKDKARLNKPP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCHHHCCCCC
TTKPAPGPARMQGESQTMVMTTAMAGVCNAANAPGTGRAVRGEPGSRSHDGPIRLACA
CCCCCCCCCCCCCCCCEEHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA