Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610217
Identifier: 121610217
GI number: 121610217
Start: 3653585
End: 3654103
Strand: Direct
Name: 121610217
Synonym: Veis_3276
Alternate gene names: NA
Gene position: 3653585-3654103 (Clockwise)
Preceding gene: 121610207
Following gene: 121610222
Centisome position: 65.63
GC content: 65.7
Gene sequence:
>519_bases TTGTCTCCTTCGTTGTATCGTCGCAGCATGTCTGTGGCCCGGTGTGGCCCTGTGTGGCCGGGCACTGCGGCGGTGTGGGC CGGATACTACGTGGCCCACTTAGGCCAGACAAGACTGAACTTTGGCCTTGATGTGGTCGAATGCCCGCAGAAACAGCGGT GCATATGGGAGGGGGCTTGGCGCCGGCTACCGCAGGGGCTTCGGCGGCATGACCGGAAGATTCCGTCCGGGCTGGCACGG CACAGGCGCGGCGCCGGCAGCAAACCATGGCGCCGGATGCGGGCCGCAAAGCCGCGTTCACCCGGCGCGCTAGTGTCGCG TCACCGATCATCTGTCGGTCCGCGCTGGCCATCGAAGCGCATCGCGGCGTTGCATCGCTTGCCAATACGCTCGGTATTGG CTGCGCGATGCGCCTTGCGCTGCGCTCCGATGGCTGCGCGCAGCCTACGACATCTGATCGGTGACGCGACACTAGTATCG GCGCTGACGACTCCATTCTGGCGGATGCGGGTGCGCTGA
Upstream 100 bases:
>100_bases GCGCCAATACATGGCGCGACACCCCCGTAGACCAGAAGATGGCTTGCAGCAAATCCATATCTGCGCTGCTGTAATGCTGC CAGCGTGCCAAGGCCAAGGT
Downstream 100 bases:
>100_bases ACTTGCATCCGCCAAGCCTGCGTTCAAGGCTTCAGCACAATCCTTTGCACCGTCGCCTGCTCCACTGCCTTGCGCGAATA CAGCAAGGGGAAGTACTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 171
Protein sequence:
>172_residues MSPSLYRRSMSVARCGPVWPGTAAVWAGYYVAHLGQTRLNFGLDVVECPQKQRCIWEGAWRRLPQGLRRHDRKIPSGLAR HRRGAGSKPWRRMRAAKPRSPGALVSRHRSSVGPRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIGDATLVS ALTTPFWRMRVR
Sequences:
>Translated_172_residues MSPSLYRRSMSVARCGPVWPGTAAVWAGYYVAHLGQTRLNFGLDVVECPQKQRCIWEGAWRRLPQGLRRHDRKIPSGLAR HRRGAGSKPWRRMRAAKPRSPGALVSRHRSSVGPRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIGDATLVS ALTTPFWRMRVR >Mature_171_residues SPSLYRRSMSVARCGPVWPGTAAVWAGYYVAHLGQTRLNFGLDVVECPQKQRCIWEGAWRRLPQGLRRHDRKIPSGLARH RRGAGSKPWRRMRAAKPRSPGALVSRHRSSVGPRWPSKRIAALHRLPIRSVLAARCALRCAPMAARSLRHLIGDATLVSA LTTPFWRMRVR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19442; Mature: 19311
Theoretical pI: Translated: 12.56; Mature: 12.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPSLYRRSMSVARCGPVWPGTAAVWAGYYVAHLGQTRLNFGLDVVECPQKQRCIWEGAW CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH RRLPQGLRRHDRKIPSGLARHRRGAGSKPWRRMRAAKPRSPGALVSRHRSSVGPRWPSKR HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHH IAALHRLPIRSVLAARCALRCAPMAARSLRHLIGDATLVSALTTPFWRMRVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC >Mature Secondary Structure SPSLYRRSMSVARCGPVWPGTAAVWAGYYVAHLGQTRLNFGLDVVECPQKQRCIWEGAW CCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHH RRLPQGLRRHDRKIPSGLARHRRGAGSKPWRRMRAAKPRSPGALVSRHRSSVGPRWPSKR HHHHHHHHHHHHHCHHHHHHHHCCCCCCHHHHHHHCCCCCCHHHHHHHHHHCCCCCCHHH IAALHRLPIRSVLAARCALRCAPMAARSLRHLIGDATLVSALTTPFWRMRVR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA