Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is 121610160
Identifier: 121610160
GI number: 121610160
Start: 3593807
End: 3594256
Strand: Direct
Name: 121610160
Synonym: Veis_3219
Alternate gene names: NA
Gene position: 3593807-3594256 (Clockwise)
Preceding gene: 121610159
Following gene: 121610162
Centisome position: 64.56
GC content: 66.44
Gene sequence:
>450_bases ATGCATTTGCGTTCCATCGTTTTGCTCGTGACCGTGCTGGCCATCGCCGCACTGGCGGCCCTGAACTGGCCCGCGCTGGC CGCTCCCGCCCCGGTATCGCTGGGGCTGATGACGGTGCAAGCCCCGCTGGGGCTGCTGATGCTGGGGCTGACGGTGCTGC TGGGCATCTTCTTTGTCGCCTATGTGCTGACGCTGCAAGGCTCGGTCCTGCTGGAAACCCGCCGCCACACCAAGGAGATG CAGGCCCAGCGCGAGTTGGCCGACAAGGCCGAGGCCTCGCGTTTCACCGAACTGCGCAGCTTTCTGGAGGCACAGCATCA GCAAAGCCACGCGGCATTGCTGGCGCGCATGGACAGCCTGGAGGAGCGCCTGACGGCGCGGGTCCAGGCGTCTGACAACA CCACGGCCGCCTATGTGGGCCAGTTGGAGCAGCAACTGCGCGGCCGTTGA
Upstream 100 bases:
>100_bases GCAGCATTGCCAAGGGCGAAGCCATCACGCAAGACACCAGCACGCTGGAGAATCCGGCCATCCTCGATCAATTGGCCCAA ATCAACTGAAGGAGACTCTC
Downstream 100 bases:
>100_bases CGCCGGCGGCACCGGACCGCATCCCGGCGCAAGTGTCGTATCAGTTCTGTTACACTGCCGGCGCGCAGTCCGGCACAGAA CACCCGTGGCAGATCACTTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 149; Mature: 149
Protein sequence:
>149_residues MHLRSIVLLVTVLAIAALAALNWPALAAPAPVSLGLMTVQAPLGLLMLGLTVLLGIFFVAYVLTLQGSVLLETRRHTKEM QAQRELADKAEASRFTELRSFLEAQHQQSHAALLARMDSLEERLTARVQASDNTTAAYVGQLEQQLRGR
Sequences:
>Translated_149_residues MHLRSIVLLVTVLAIAALAALNWPALAAPAPVSLGLMTVQAPLGLLMLGLTVLLGIFFVAYVLTLQGSVLLETRRHTKEM QAQRELADKAEASRFTELRSFLEAQHQQSHAALLARMDSLEERLTARVQASDNTTAAYVGQLEQQLRGR >Mature_149_residues MHLRSIVLLVTVLAIAALAALNWPALAAPAPVSLGLMTVQAPLGLLMLGLTVLLGIFFVAYVLTLQGSVLLETRRHTKEM QAQRELADKAEASRFTELRSFLEAQHQQSHAALLARMDSLEERLTARVQASDNTTAAYVGQLEQQLRGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16285; Mature: 16285
Theoretical pI: Translated: 9.13; Mature: 9.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHLRSIVLLVTVLAIAALAALNWPALAAPAPVSLGLMTVQAPLGLLMLGLTVLLGIFFVA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVLTLQGSVLLETRRHTKEMQAQRELADKAEASRFTELRSFLEAQHQQSHAALLARMDSL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERLTARVQASDNTTAAYVGQLEQQLRGR HHHHHHHHHCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MHLRSIVLLVTVLAIAALAALNWPALAAPAPVSLGLMTVQAPLGLLMLGLTVLLGIFFVA CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YVLTLQGSVLLETRRHTKEMQAQRELADKAEASRFTELRSFLEAQHQQSHAALLARMDSL HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EERLTARVQASDNTTAAYVGQLEQQLRGR HHHHHHHHHCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA