Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
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Accession | NC_008786 |
Length | 5,566,749 |
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The map label for this gene is folA [H]
Identifier: 121610114
GI number: 121610114
Start: 3536193
End: 3536681
Strand: Direct
Name: folA [H]
Synonym: Veis_3173
Alternate gene names: 121610114
Gene position: 3536193-3536681 (Clockwise)
Preceding gene: 121610113
Following gene: 121610118
Centisome position: 63.52
GC content: 69.33
Gene sequence:
>489_bases ATGCCGCTGCACCTGATCTACGCCCGCGCGGCCAACGGCGTCATCGGCAAGGACGGCCGCCTGCCCTGGCATCTGCCGCA GGACATGGCGCATTTCAGGCAACTCACCCAGGGTTGCAGCGTGATCATGGGCCGCAAGACCTGGGACTCGCTGCCCGCGC GCTTTCGCCCGCTGCCGGGCCGCAGCAACATCGTGGTGACGCGCCAAAGCGACTGGCATGCCGACGGCGCCCGGCGCGCA GCCAGCCTGGAGCAAGCCCTGGCGCTCTGCGATGCCCGCCAGACCGCCTGGGTGATCGGCGGCGCGCAACTGTATGCCCA AGCCCTGCCTCTGGCCGACTGCGTCGAGGTGACCGAGATCAACCAAGACTTCGACGGCGATGCCCACGCGCCCACACTGG GTGCCGAGTGGGTCGAGATCCGGCGCAGCCGCCAGCCCGATCAGCACGGGCTGGCTTTCAGTTTTGTGCGCTATGCGCGC GCGGGCTGA
Upstream 100 bases:
>100_bases CGGCCCGACAGCATCTTCGACTACCGCTACGAAGATTTCGAGGTGCTGGACTACCGATGCCACCCCGCGATCAAGGCGCC CGTGGCGGTCTGACCGGGTC
Downstream 100 bases:
>100_bases CCACCTCCTGCCAGCACAGGGCCCCTGTGGCCACCGTGGCGAGGGCACTGGACATGGGCGCGATGCTCTGCCCGAACGCA CCACCCCCTTCAATCATCTG
Product: dihydrofolate reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 161
Protein sequence:
>162_residues MPLHLIYARAANGVIGKDGRLPWHLPQDMAHFRQLTQGCSVIMGRKTWDSLPARFRPLPGRSNIVVTRQSDWHADGARRA ASLEQALALCDARQTAWVIGGAQLYAQALPLADCVEVTEINQDFDGDAHAPTLGAEWVEIRRSRQPDQHGLAFSFVRYAR AG
Sequences:
>Translated_162_residues MPLHLIYARAANGVIGKDGRLPWHLPQDMAHFRQLTQGCSVIMGRKTWDSLPARFRPLPGRSNIVVTRQSDWHADGARRA ASLEQALALCDARQTAWVIGGAQLYAQALPLADCVEVTEINQDFDGDAHAPTLGAEWVEIRRSRQPDQHGLAFSFVRYAR AG >Mature_161_residues PLHLIYARAANGVIGKDGRLPWHLPQDMAHFRQLTQGCSVIMGRKTWDSLPARFRPLPGRSNIVVTRQSDWHADGARRAA SLEQALALCDARQTAWVIGGAQLYAQALPLADCVEVTEINQDFDGDAHAPTLGAEWVEIRRSRQPDQHGLAFSFVRYARA G
Specific function: Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis [H]
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 DHFR (dihydrofolate reductase) domain [H]
Homologues:
Organism=Homo sapiens, GI4503323, Length=181, Percent_Identity=32.5966850828729, Blast_Score=86, Evalue=1e-17, Organism=Homo sapiens, GI28827793, Length=151, Percent_Identity=35.0993377483444, Blast_Score=75, Evalue=3e-14, Organism=Escherichia coli, GI1786233, Length=129, Percent_Identity=40.3100775193798, Blast_Score=94, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17505899, Length=181, Percent_Identity=37.0165745856354, Blast_Score=104, Evalue=2e-23, Organism=Saccharomyces cerevisiae, GI6324810, Length=124, Percent_Identity=37.0967741935484, Blast_Score=87, Evalue=1e-18, Organism=Drosophila melanogaster, GI116008026, Length=172, Percent_Identity=30.2325581395349, Blast_Score=80, Evalue=7e-16, Organism=Drosophila melanogaster, GI24647458, Length=172, Percent_Identity=30.2325581395349, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: 640 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 10,000 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012259 - InterPro: IPR017925 - InterPro: IPR001796 [H]
Pfam domain/function: PF00186 DHFR_1 [H]
EC number: =1.5.1.3 [H]
Molecular weight: Translated: 17968; Mature: 17836
Theoretical pI: Translated: 8.51; Mature: 8.51
Prosite motif: PS00075 DHFR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPLHLIYARAANGVIGKDGRLPWHLPQDMAHFRQLTQGCSVIMGRKTWDSLPARFRPLPG CCEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHCCHHCCCCCC RSNIVVTRQSDWHADGARRAASLEQALALCDARQTAWVIGGAQLYAQALPLADCVEVTEI CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHC NQDFDGDAHAPTLGAEWVEIRRSRQPDQHGLAFSFVRYARAG CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure PLHLIYARAANGVIGKDGRLPWHLPQDMAHFRQLTQGCSVIMGRKTWDSLPARFRPLPG CEEEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCHHHCCHHCCCCCC RSNIVVTRQSDWHADGARRAASLEQALALCDARQTAWVIGGAQLYAQALPLADCVEVTEI CCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCCEEEECHHHHHHHHCCHHHHHHHHHC NQDFDGDAHAPTLGAEWVEIRRSRQPDQHGLAFSFVRYARAG CCCCCCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6434541 [H]