Definition Verminephrobacter eiseniae EF01-2 chromosome, complete genome.
Accession NC_008786
Length 5,566,749

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The map label for this gene is 121610052

Identifier: 121610052

GI number: 121610052

Start: 3456710

End: 3457276

Strand: Direct

Name: 121610052

Synonym: Veis_3109

Alternate gene names: NA

Gene position: 3456710-3457276 (Clockwise)

Preceding gene: 121610050

Following gene: 121610054

Centisome position: 62.1

GC content: 50.79

Gene sequence:

>567_bases
GTGCAAGCGGATCGGGTTGCATGGAAGGAAAGCCAGCCAGCACTTGACGCAACAAAGCTTGTGTTCCTTGATGAGACGGG
CACATCCACCAACATGACCCGCACACGAGGCCGTTCGCCGAAGGGACAGCGTTGCATAGCCAGTGTTCCACATGGTCACC
GGAAAATCACCACCTTCATTGCCGGCTTGCGGGTAAACGCCGTGACCGCCCCAATGGTCTTGGATGGCCCTATGGATGGC
GAAGCATTCCTGGCCTATATACAGCAATTTCTGTGTCCTACGCTGCACCCTGGTGATATCGTGATCGCTGATAATTTGTC
CAGCCATAAAGTCTCTGGTGTGCGTGAGGCCATTGAGGGGGTTGGTGCAACATTGCGTTATCTTCCGCCTTACTCACCAG
ATTTGAACCCTATCGAAAAATTCTTTTCCAAACTGAAAGCCCTGCTCAGGCAAGCTGAACAGCGTACTGTCGATGGACTT
TGGAATACCATCGGGCACCTGCTTGATTGTTTTACACCACAGGAATTGTCCAACTACTTTTCATCTTCTGGATATGTTTC
TACTTAA

Upstream 100 bases:

>100_bases
GGGATAACGATCAAAGCCCCAGCCCTATGGCACCAACTGAATAAATGGGGTTTGAGCTTTAAAAAAAACTCTGCACGCCA
GCGAGCAAGAGCGTAAGGAT

Downstream 100 bases:

>100_bases
ATCAAAAATGCTCTATGGATCGGCATGCAGCGCGTGGCCGACTTCGCTGCCGGACTGGACTACGCCAGGGAAATCCAGGC
GCTGTGAGATGTGTGCAATC

Product: ISRm2011-2 transposase protein

Products: NA

Alternate protein names: Transposase Of Insertion Sequence; Transposase And Inactivated Derivatives-Like Protein; ISSpo6 Transposase OrfB; LOW QUALITY PROTEIN Transposase; Insertion Sequence Transposase Protein; Transposase For Insertion Sequence Element; ISHde6 Transposase OrfB; Transposase Family Protein; Transposase IS; ISRin2 Transposase OrfB; ISSoc4 Transposase OrfAB; ISHde1 Transposase OrfB; Transposase And Inactivated Derivative; Transposase Fragment

Number of amino acids: Translated: 188; Mature: 188

Protein sequence:

>188_residues
MQADRVAWKESQPALDATKLVFLDETGTSTNMTRTRGRSPKGQRCIASVPHGHRKITTFIAGLRVNAVTAPMVLDGPMDG
EAFLAYIQQFLCPTLHPGDIVIADNLSSHKVSGVREAIEGVGATLRYLPPYSPDLNPIEKFFSKLKALLRQAEQRTVDGL
WNTIGHLLDCFTPQELSNYFSSSGYVST

Sequences:

>Translated_188_residues
MQADRVAWKESQPALDATKLVFLDETGTSTNMTRTRGRSPKGQRCIASVPHGHRKITTFIAGLRVNAVTAPMVLDGPMDG
EAFLAYIQQFLCPTLHPGDIVIADNLSSHKVSGVREAIEGVGATLRYLPPYSPDLNPIEKFFSKLKALLRQAEQRTVDGL
WNTIGHLLDCFTPQELSNYFSSSGYVST
>Mature_188_residues
MQADRVAWKESQPALDATKLVFLDETGTSTNMTRTRGRSPKGQRCIASVPHGHRKITTFIAGLRVNAVTAPMVLDGPMDG
EAFLAYIQQFLCPTLHPGDIVIADNLSSHKVSGVREAIEGVGATLRYLPPYSPDLNPIEKFFSKLKALLRQAEQRTVDGL
WNTIGHLLDCFTPQELSNYFSSSGYVST

Specific function: Unknown

COG id: COG3335

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20665; Mature: 20665

Theoretical pI: Translated: 8.09; Mature: 8.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQADRVAWKESQPALDATKLVFLDETGTSTNMTRTRGRSPKGQRCIASVPHGHRKITTFI
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCHHHCCCCCHHHHHHHH
AGLRVNAVTAPMVLDGPMDGEAFLAYIQQFLCPTLHPGDIVIADNLSSHKVSGVREAIEG
HHHHHCCEECCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
VGATLRYLPPYSPDLNPIEKFFSKLKALLRQAEQRTVDGLWNTIGHLLDCFTPQELSNYF
HCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SSSGYVST
CCCCCCCC
>Mature Secondary Structure
MQADRVAWKESQPALDATKLVFLDETGTSTNMTRTRGRSPKGQRCIASVPHGHRKITTFI
CCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCHHHCCCCCCCCCHHHCCCCCHHHHHHHH
AGLRVNAVTAPMVLDGPMDGEAFLAYIQQFLCPTLHPGDIVIADNLSSHKVSGVREAIEG
HHHHHCCEECCEEECCCCCHHHHHHHHHHHHCCCCCCCCEEEECCCCHHHHHHHHHHHHH
VGATLRYLPPYSPDLNPIEKFFSKLKALLRQAEQRTVDGLWNTIGHLLDCFTPQELSNYF
HCCCEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH
SSSGYVST
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA