| Definition | Verminephrobacter eiseniae EF01-2 chromosome, complete genome. |
|---|---|
| Accession | NC_008786 |
| Length | 5,566,749 |
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The map label for this gene is 121609886
Identifier: 121609886
GI number: 121609886
Start: 3290528
End: 3290980
Strand: Direct
Name: 121609886
Synonym: Veis_2939
Alternate gene names: NA
Gene position: 3290528-3290980 (Clockwise)
Preceding gene: 121609885
Following gene: 121609887
Centisome position: 59.11
GC content: 66.23
Gene sequence:
>453_bases ATGCTCGATCGGAACCTGATTGGCCACAGCTTCGGCAAGCGCAGCCTTGTCGTCGAGGAAGGCGCCGTGCGCTCGTATGC GCAGGCCATCGGCGAGACCGATGCGACCTGCTTCGACCCGTCTGCGGCGCGCGCTGCCGGCCACCGTGCGCTGCGCGTTC CGCCCACCTTCCTGTCATGTCTGGAAGGGCGTCTGTTCCCGACGCGCGCGCTGCTGGAGCTGGCCGGCATCGACCTCGAG CGCCTGCTGCACGCGGAGCAGTCCTACGAATACCACGCGCAAGCCTACGCCGGCGACACCCTCAGCTACGAGCAGAAGAT CGTCGACATCTACGACAAGAAGGGCGGAGCACTCGAGTTCCTGGTCAAGCAGACGCGCGTCAGCAACCAGGACGGCGTGC ACATCGCCGATCTGCGCGCAGCCCTGGTGCAGCGCCAACTCGTGAAGGCATGA
Upstream 100 bases:
>100_bases CGCGTTTCGCGCGTGGTCGGCGGCGCCAACGAAGTCATGCGCGACCTCATCGCGCGCAAGCTGTGAGCCGGCCATGGGTG AAAAATAACGGACAAGCGCC
Downstream 100 bases:
>100_bases CAACATGGCCACCCCGGCATTGCAAGACATGCAGGTGGGCGACAGCATCCCCGCGCTGCAGTTGCCCGCGATCTCCCGCA CCACGCTGGCGCTGTATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Acyl Dehydratase; MaoC Domain Protein Dehydratase; MaoC Domain-Containing Protein
Number of amino acids: Translated: 150; Mature: 150
Protein sequence:
>150_residues MLDRNLIGHSFGKRSLVVEEGAVRSYAQAIGETDATCFDPSAARAAGHRALRVPPTFLSCLEGRLFPTRALLELAGIDLE RLLHAEQSYEYHAQAYAGDTLSYEQKIVDIYDKKGGALEFLVKQTRVSNQDGVHIADLRAALVQRQLVKA
Sequences:
>Translated_150_residues MLDRNLIGHSFGKRSLVVEEGAVRSYAQAIGETDATCFDPSAARAAGHRALRVPPTFLSCLEGRLFPTRALLELAGIDLE RLLHAEQSYEYHAQAYAGDTLSYEQKIVDIYDKKGGALEFLVKQTRVSNQDGVHIADLRAALVQRQLVKA >Mature_150_residues MLDRNLIGHSFGKRSLVVEEGAVRSYAQAIGETDATCFDPSAARAAGHRALRVPPTFLSCLEGRLFPTRALLELAGIDLE RLLHAEQSYEYHAQAYAGDTLSYEQKIVDIYDKKGGALEFLVKQTRVSNQDGVHIADLRAALVQRQLVKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16541; Mature: 16541
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDRNLIGHSFGKRSLVVEEGAVRSYAQAIGETDATCFDPSAARAAGHRALRVPPTFLSC CCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHH LEGRLFPTRALLELAGIDLERLLHAEQSYEYHAQAYAGDTLSYEQKIVDIYDKKGGALEF HCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH LVKQTRVSNQDGVHIADLRAALVQRQLVKA HHHHHHCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MLDRNLIGHSFGKRSLVVEEGAVRSYAQAIGETDATCFDPSAARAAGHRALRVPPTFLSC CCCCCCCCCCCCCCCEEECHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCEEECCHHHHHH LEGRLFPTRALLELAGIDLERLLHAEQSYEYHAQAYAGDTLSYEQKIVDIYDKKGGALEF HCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHH LVKQTRVSNQDGVHIADLRAALVQRQLVKA HHHHHHCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA