Definition | Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence. |
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Accession | NC_008762 |
Length | 21,611 |
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The map label for this gene is 121583554
Identifier: 121583554
GI number: 121583554
Start: 9788
End: 10114
Strand: Reverse
Name: 121583554
Synonym: Pnap_4983
Alternate gene names: NA
Gene position: 10114-9788 (Counterclockwise)
Preceding gene: 121583558
Following gene: 121583553
Centisome position: 46.8
GC content: 51.68
Gene sequence:
>327_bases GTGCTTATGGTTTTCAAAGCAATCGGTGATGAACCGCTAGACACTAAAGTTGACGTTCGCTTGACAAGCGAAGAAAAGGC ACGCCTCCAAGAAGATGCAGAATTCGCCGGAATGTCCATGAGCGCCCTTGTGCGTGCCCGCTACTTTGGCCGACCGATCA TTGCCAACACCGATCAAGTGATGATTCGAGAATTGCGCCGACAGGGCGGCTTACTCAACAAAGTCCACCTTGAGAGCGAC GGAGCGTATTCAGCCGAAACAGCCGCAGCTTTGCGTTTGATAAGCGATGCGATCAAGTCAATCAGCCAAGCCGGTAGATC AAAGTGA
Upstream 100 bases:
>100_bases GCTATTCGGCGGCTTCGCCTTCTCACATCTACCCTCCCCTTGCAATGGCTCTGCCCTTGACCCGCTGACAAACAGCCAAC AACCCCCGCTACCCTGGAGC
Downstream 100 bases:
>100_bases TCGTCAAAAAGATACCCAACAAAAAAGCGGGAGGTACAAAATCCGCCCGTGTTGCTGGCGTTGCAAACTATATTGTTGAA CCGCAGCGTGAAAACGGCAT
Product: hypothetical protein
Products: NA
Alternate protein names: OriT Recognition-Like Protein; MobB Mobilisation Protein
Number of amino acids: Translated: 108; Mature: 108
Protein sequence:
>108_residues MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD GAYSAETAAALRLISDAIKSISQAGRSK
Sequences:
>Translated_108_residues MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD GAYSAETAAALRLISDAIKSISQAGRSK >Mature_108_residues MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD GAYSAETAAALRLISDAIKSISQAGRSK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11898; Mature: 11898
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.6 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 4.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQV CEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHH MIRELRRQGGLLNKVHLESDGAYSAETAAALRLISDAIKSISQAGRSK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQV CEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHH MIRELRRQGGLLNKVHLESDGAYSAETAAALRLISDAIKSISQAGRSK HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA