Definition Polaromonas naphthalenivorans CJ2 plasmid pPNAP06, complete sequence.
Accession NC_008762
Length 21,611

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The map label for this gene is 121583554

Identifier: 121583554

GI number: 121583554

Start: 9788

End: 10114

Strand: Reverse

Name: 121583554

Synonym: Pnap_4983

Alternate gene names: NA

Gene position: 10114-9788 (Counterclockwise)

Preceding gene: 121583558

Following gene: 121583553

Centisome position: 46.8

GC content: 51.68

Gene sequence:

>327_bases
GTGCTTATGGTTTTCAAAGCAATCGGTGATGAACCGCTAGACACTAAAGTTGACGTTCGCTTGACAAGCGAAGAAAAGGC
ACGCCTCCAAGAAGATGCAGAATTCGCCGGAATGTCCATGAGCGCCCTTGTGCGTGCCCGCTACTTTGGCCGACCGATCA
TTGCCAACACCGATCAAGTGATGATTCGAGAATTGCGCCGACAGGGCGGCTTACTCAACAAAGTCCACCTTGAGAGCGAC
GGAGCGTATTCAGCCGAAACAGCCGCAGCTTTGCGTTTGATAAGCGATGCGATCAAGTCAATCAGCCAAGCCGGTAGATC
AAAGTGA

Upstream 100 bases:

>100_bases
GCTATTCGGCGGCTTCGCCTTCTCACATCTACCCTCCCCTTGCAATGGCTCTGCCCTTGACCCGCTGACAAACAGCCAAC
AACCCCCGCTACCCTGGAGC

Downstream 100 bases:

>100_bases
TCGTCAAAAAGATACCCAACAAAAAAGCGGGAGGTACAAAATCCGCCCGTGTTGCTGGCGTTGCAAACTATATTGTTGAA
CCGCAGCGTGAAAACGGCAT

Product: hypothetical protein

Products: NA

Alternate protein names: OriT Recognition-Like Protein; MobB Mobilisation Protein

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD
GAYSAETAAALRLISDAIKSISQAGRSK

Sequences:

>Translated_108_residues
MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD
GAYSAETAAALRLISDAIKSISQAGRSK
>Mature_108_residues
MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQVMIRELRRQGGLLNKVHLESD
GAYSAETAAALRLISDAIKSISQAGRSK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11898; Mature: 11898

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQV
CEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHH
MIRELRRQGGLLNKVHLESDGAYSAETAAALRLISDAIKSISQAGRSK
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MLMVFKAIGDEPLDTKVDVRLTSEEKARLQEDAEFAGMSMSALVRARYFGRPIIANTDQV
CEEEEECCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHH
MIRELRRQGGLLNKVHLESDGAYSAETAAALRLISDAIKSISQAGRSK
HHHHHHHHCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA