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The map label for this gene is fliS [H]

Identifier: 120613034

GI number: 120613034

Start: 4887885

End: 4888331

Strand: Reverse

Name: fliS [H]

Synonym: Aave_4398

Alternate gene names: 120613034

Gene position: 4888331-4887885 (Counterclockwise)

Preceding gene: 120613035

Following gene: 120613033

Centisome position: 91.32

GC content: 63.09

Gene sequence:

>447_bases
ATGTTCACCGCTTACCAATCCCGTGCCAATGCCTATCAGCGCATCAACGTCGAGACGAGCATGCACACCATCGACCAGCA
CCAGCTGGTCAGCCTTTTGTATGCAGGTGTGCTGAACTCCATCGCCACGGCGCGTGGTGCATTGGCCCGGGGCGACGTGG
CGACCAAGTGCGCAGCCATCTCCAAGGCGGTGCGCATTCTGGAGGAAGGGTTGAGCACGGCCCTCGATCGCGATGAGGGC
GGCGCGCTGGCGAGCAACCTGGAGGCGGTGTACGACTACAGCCTGCGTCGCCTGATCCAGGCGAATGCCAAGAACGACGA
CGCAATGCTGGAAGAAGTCGCGCGCCTGATCGAGCCGATAGCCCAAGGGTGGAACGATATCAAGAAGGTGGCCATAGCCA
CGGCGGCTGCCAACGACGTGGCCCACCCCGTGGTGGCGGAGGCCTGA

Upstream 100 bases:

>100_bases
CAGCAGCAGGTGGTGGCCTGGAATAAAACCCTGTGAAGGGGCTTCAGTTTTTTGGCGGGACGCCGATAAATTGAACAACA
GATTCCGAGGAGCGACCGCC

Downstream 100 bases:

>100_bases
AATATGAACGACATGCTGATTGACTACTACAAGGCCATCGAAGACAGCAGTGCGCGGATGCTCGAAGCCGCCAAGCTCAA
GGACTGGGACGAGGTCGTGC

Product: flagellar protein FliS

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MFTAYQSRANAYQRINVETSMHTIDQHQLVSLLYAGVLNSIATARGALARGDVATKCAAISKAVRILEEGLSTALDRDEG
GALASNLEAVYDYSLRRLIQANAKNDDAMLEEVARLIEPIAQGWNDIKKVAIATAAANDVAHPVVAEA

Sequences:

>Translated_148_residues
MFTAYQSRANAYQRINVETSMHTIDQHQLVSLLYAGVLNSIATARGALARGDVATKCAAISKAVRILEEGLSTALDRDEG
GALASNLEAVYDYSLRRLIQANAKNDDAMLEEVARLIEPIAQGWNDIKKVAIATAAANDVAHPVVAEA
>Mature_148_residues
MFTAYQSRANAYQRINVETSMHTIDQHQLVSLLYAGVLNSIATARGALARGDVATKCAAISKAVRILEEGLSTALDRDEG
GALASNLEAVYDYSLRRLIQANAKNDDAMLEEVARLIEPIAQGWNDIKKVAIATAAANDVAHPVVAEA

Specific function: Not Known. [C]

COG id: COG1516

COG function: function code NUO; Flagellin-specific chaperone FliS

Gene ontology:

Cell location: Cytoplasm, cytosol (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the fliS family [H]

Homologues:

Organism=Escherichia coli, GI1788234, Length=116, Percent_Identity=38.7931034482759, Blast_Score=87, Evalue=4e-19,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003713 [H]

Pfam domain/function: PF02561 FliS [H]

EC number: NA

Molecular weight: Translated: 15867; Mature: 15867

Theoretical pI: Translated: 5.19; Mature: 5.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFTAYQSRANAYQRINVETSMHTIDQHQLVSLLYAGVLNSIATARGALARGDVATKCAAI
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SKAVRILEEGLSTALDRDEGGALASNLEAVYDYSLRRLIQANAKNDDAMLEEVARLIEPI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQGWNDIKKVAIATAAANDVAHPVVAEA
HHHHHHHHHHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MFTAYQSRANAYQRINVETSMHTIDQHQLVSLLYAGVLNSIATARGALARGDVATKCAAI
CCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
SKAVRILEEGLSTALDRDEGGALASNLEAVYDYSLRRLIQANAKNDDAMLEEVARLIEPI
HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
AQGWNDIKKVAIATAAANDVAHPVVAEA
HHHHHHHHHHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527488; 11677609 [H]