Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cheW [H]
Identifier: 120613013
GI number: 120613013
Start: 4870015
End: 4870515
Strand: Reverse
Name: cheW [H]
Synonym: Aave_4377
Alternate gene names: 120613013
Gene position: 4870515-4870015 (Counterclockwise)
Preceding gene: 120613014
Following gene: 120613012
Centisome position: 90.99
GC content: 60.68
Gene sequence:
>501_bases ATGGCGACTGTGATGGAAAAAACGACCGAAGCGGCTGGCGCTTCCGTGGGGGGTGCCCGCGAATACCTGACGTTCCGCCT CGACCAGGAGGAATACGGCATCGACATCCTCAAGGTCCAGGAAATCCGGGGCTACGAGCCGCCGACCCGCATCGCGAATG CGCCCGAATTCATCAAGGGCGTGACGAACCTGCGGGGCACCATCGTGCCCATCGTGGACATGCGGCTCAAGTTCGACTGC TCCAAGGCCGAATACAACAGTTTCACGGTGGTCATCATCCTGAACCTGCGCAACCGGGTCGTGGGGATCGTGGTCGATTC CGTGAGCGACGTCATGGAACTCACGTCCGACCAGATCCGGCTGGCCCCGGAAATCGAAAGCTCCATCGACAGCAACTGCA TCGTGGGGCTCGGCTCCGTGGGCGAGCGCATGCTCATCCTTCTCGACATCGAGAAGCTCATGTCCAACCCGGACATGGGC CTCATATCCACGCACGAATGA
Upstream 100 bases:
>100_bases TCTGGGCGACGGCACCGTGGCACTGATCCTCGACACCGGGGCCCTGGTCCGCCGTGTCCGCCATTGATACGCCGCTGGGC AGACTGAAGGAGAGCCACTC
Downstream 100 bases:
>100_bases TCTGACGAAAGGGGGGCGAGGCAGACAGGCCCCTCCAAGTCAACGCGGAACAAGAGCGGCGTTTCCCGGTGCACCGGCCG GTTGCCAGAGATGCGGAACT
Product: CheW protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 166; Mature: 165
Protein sequence:
>166_residues MATVMEKTTEAAGASVGGAREYLTFRLDQEEYGIDILKVQEIRGYEPPTRIANAPEFIKGVTNLRGTIVPIVDMRLKFDC SKAEYNSFTVVIILNLRNRVVGIVVDSVSDVMELTSDQIRLAPEIESSIDSNCIVGLGSVGERMLILLDIEKLMSNPDMG LISTHE
Sequences:
>Translated_166_residues MATVMEKTTEAAGASVGGAREYLTFRLDQEEYGIDILKVQEIRGYEPPTRIANAPEFIKGVTNLRGTIVPIVDMRLKFDC SKAEYNSFTVVIILNLRNRVVGIVVDSVSDVMELTSDQIRLAPEIESSIDSNCIVGLGSVGERMLILLDIEKLMSNPDMG LISTHE >Mature_165_residues ATVMEKTTEAAGASVGGAREYLTFRLDQEEYGIDILKVQEIRGYEPPTRIANAPEFIKGVTNLRGTIVPIVDMRLKFDCS KAEYNSFTVVIILNLRNRVVGIVVDSVSDVMELTSDQIRLAPEIESSIDSNCIVGLGSVGERMLILLDIEKLMSNPDMGL ISTHE
Specific function: Involved in the transmission of sensory signals from the chemoreceptors to the flagellar motors. It physically bridges CheA to the MCPs (methyl-accepting chemotaxis proteins) to allow regulated phosphotransfer to CheY and CheB [H]
COG id: COG0835
COG function: function code NT; Chemotaxis signal transduction protein
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cheW-like domain [H]
Homologues:
Organism=Escherichia coli, GI1788196, Length=151, Percent_Identity=60.2649006622517, Blast_Score=184, Evalue=4e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002545 [H]
Pfam domain/function: PF01584 CheW [H]
EC number: NA
Molecular weight: Translated: 18293; Mature: 18162
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: PS50851 CHEW
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATVMEKTTEAAGASVGGAREYLTFRLDQEEYGIDILKVQEIRGYEPPTRIANAPEFIKG CCCHHHHHHHHCCCCCCCCCEEEEEEECCHHHCEEEEEEEECCCCCCCHHCCCCHHHHHH VTNLRGTIVPIVDMRLKFDCSKAEYNSFTVVIILNLRNRVVGIVVDSVSDVMELTSDQIR HHHCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEE LAPEIESSIDSNCIVGLGSVGERMLILLDIEKLMSNPDMGLISTHE ECCCHHHCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCEEECCC >Mature Secondary Structure ATVMEKTTEAAGASVGGAREYLTFRLDQEEYGIDILKVQEIRGYEPPTRIANAPEFIKG CCHHHHHHHHCCCCCCCCCEEEEEEECCHHHCEEEEEEEECCCCCCCHHCCCCHHHHHH VTNLRGTIVPIVDMRLKFDCSKAEYNSFTVVIILNLRNRVVGIVVDSVSDVMELTSDQIR HHHCCCEEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEEEHHHHHHHHHCCCCEE LAPEIESSIDSNCIVGLGSVGERMLILLDIEKLMSNPDMGLISTHE ECCCHHHCCCCCEEEEECCCCCEEEEEEEHHHHHCCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]