| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612964
Identifier: 120612964
GI number: 120612964
Start: 4806595
End: 4806981
Strand: Direct
Name: 120612964
Synonym: Aave_4328
Alternate gene names: NA
Gene position: 4806595-4806981 (Clockwise)
Preceding gene: 120612963
Following gene: 120612965
Centisome position: 89.8
GC content: 70.03
Gene sequence:
>387_bases ATGACGCCTCCGGACGGCGGCGGCATCACGCCGCTGGTGGCCCTGCTGTGGTTGCTGAACATGCTGGTGGACACGGGCGG ACAGCTCGCCTTCAAGGCCGCGGCCACGGCCGACCCGCGTGCGGGCACGGGACTGGCGCGCTGGATCTGGATGGCGCGCC GGCCCTGGATCTGGGTCGGCATCGGCTGCTACGTGGCCGAATTCCTGGTCTGGCTGGCGTTCCTGTCCCTCGTGCCGCTG TCCGACGGCGTGCTGCTGGGCTCGATCAACATCGTGGCCGTGATGATCGCCGGACGCTTCCTGTTCCGCGAAAAGCTCTC GCCGATGCGGGTGGCGGGCATCCTGCTGGTGTCGGCGGGCGTGGCCGTCGTCGGCCTGAAGGGGTGA
Upstream 100 bases:
>100_bases TCGACCGCGACCGCCGCACGGTGCTGGCGCGCACGGTGGCCTTCGCCGAATCGATCGCGCAGCAGCAGGCGCAGGCGCAA CCGCAGGAAGGCGCCACGCC
Downstream 100 bases:
>100_bases CGCCGTGCGACGCTTTTATGCCATCGGCTTTCTCGTCCTGGTCGCCTTCGACACGCTCGCGCAGATCAGCTTCAAGCTCG CGGGCGAGCATGCGCTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 128; Mature: 127
Protein sequence:
>128_residues MTPPDGGGITPLVALLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVGIGCYVAEFLVWLAFLSLVPL SDGVLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAGVAVVGLKG
Sequences:
>Translated_128_residues MTPPDGGGITPLVALLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVGIGCYVAEFLVWLAFLSLVPL SDGVLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAGVAVVGLKG >Mature_127_residues TPPDGGGITPLVALLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVGIGCYVAEFLVWLAFLSLVPLS DGVLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAGVAVVGLKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13574; Mature: 13442
Theoretical pI: Translated: 10.61; Mature: 10.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPPDGGGITPLVALLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVG CCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEE IGCYVAEFLVWLAFLSLVPLSDGVLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAG HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VAVVGLKG EEEEEECC >Mature Secondary Structure TPPDGGGITPLVALLWLLNMLVDTGGQLAFKAAATADPRAGTGLARWIWMARRPWIWVG CCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHHHHHCCCEEEEE IGCYVAEFLVWLAFLSLVPLSDGVLLGSINIVAVMIAGRFLFREKLSPMRVAGILLVSAG HHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCC VAVVGLKG EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA