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The map label for this gene is 120612916

Identifier: 120612916

GI number: 120612916

Start: 4747376

End: 4748812

Strand: Reverse

Name: 120612916

Synonym: Aave_4280

Alternate gene names: NA

Gene position: 4748812-4747376 (Counterclockwise)

Preceding gene: 120612917

Following gene: 120612913

Centisome position: 88.72

GC content: 73.14

Gene sequence:

>1437_bases
ATGCGTAGCTTCCTGCCCCTGTCCGTTACCGCGCCGACCCGTTTCCGCGTTCCTTTCCTGACCGCCGCCTTGCTGGCGAT
TCCTGCCACCGGGGCCTGGGCTGCGTCTCCGGACGGCTCCCCCATCGCTGCGCCCGCGACCGCCGCGGCGGACGGCGACG
CTCCGCCCGAGCCCCGCGTGGCCCTGCACGCCCAGACCACCTACGTCTGGCAGCGCAAGCCGGCCTTCGACGCGGCCTAC
ACCGGCCCGAACAGCCTGGTGCCCACGCGCGAGCGCTCCTACTCCTTCACCGCCACGGCCGACCTGGCGGTGCGGCCCTG
GGAAGGGGGGCAACTGCACTTCAATCCGGAGGCCGCCCGGGGCGTGCCGCTGTCCCACCTCGCGGGCGCGGGCGGGCTCT
CCAACGGCGAGCTGGCGCGCTCTTCCGGGTCACAGCTCAAGGCCTACCGGGCGCGGCTCTTCTGGCTGCAGCGCTGGAAT
GCGGGCGGCGAGACGGAGAAGATCGACGCGGATTTCAACGAAATGGGCGGCACGGCCACCGCGCGGCGCTGGACGCTGGT
GCTGGGCAACGTCTCCCTGCTGGACTATTTCGATCCGAACCCTTATGCCAAGGATCCGCGCGAGCAGTTCTTCAACTGGT
CGTTCCTGGCGCCGGGGCCGTGGGACTACGCCGCCGATGCGCGCGGCTACACCTGGGCCGGCATCCTCGAATACCGCACG
CCGCAGTGGGCCGTGCGCGGCGGCCGGGGGCTGCAGCCGCGCGAATCCAACGGACCGAAGCTCGACCGCGCCTGGCAGCG
CCGTTACGGCGACCAGATCGAGGCCGAATCCGACCTGCCCGTGGCCCTGCCGGCGGGCCCGCTGCGCGGTCGCGTGCTGT
GGTTCCGCAACCGGGCGGTGATGGGCGCGTTCGACGATGCGGTGGCGCTGGGGCAGGCCGCCGGCACGGTGCCGGACGTG
GGCGCGGTGCGCCGGCTGCAGACCAAGACCGGCTGGGCCGTGACCCTGGAGGCGCCGCTGGGCGAGGATGCCGGCGTGTT
CGTGCGCGCGGGCCGCAGCGGCGGGCGGCAGGAGACGTTCGCGTTCACCGAGATCGACCGGCAACTGTCGGTGGGCGGCC
AGTGGTCCGGCGCGGCCTGGGGCCGGCCTGCGGACCGCATGGGCGCGGCCCTGGCGGTGAATGGATTGTCGGGTGGCCAC
CGCGATTACCTGGCGGCCGGCGGGCAGGGCGCGTTCCTGGGCGACGGCGCGCTGAACTACGGCCGCGAGCGGGTGTGGGA
GGTGTATTACCGCGCCGTGATGCCGCCGGTGCCAACGGCCGCCGGTGCGCTGCATTCGGCGGTGTCGCTGGGCGCGCAGC
GCATCCGGAATCCGGGCTACAACCGCGACCGCGGGCCGGTGGATATTGTCTCGGTGCGCCTGCACGCGGAGTTCTGA

Upstream 100 bases:

>100_bases
GCCCCTGCGCTGACCTTCCTGCCCGGCAGTGTGGCGGCCGAGTCACACCGGGGGCAGGCCGACACGGCCGCGCCGCCGGG
CGCTGCCAGAATGCCGGCCC

Downstream 100 bases:

>100_bases
GCGCTCCGGCGCATGGCGCTCAGGCCGTGGCGCCGGTCTGCGGGGAGCGGGCCTGCAGCGCGTGGCCCTGCAGTTGCGCC
AGGCCGTCGCGAAGGGCTTC

Product: carbohydrate-selective porin OprB

Products: NA

Alternate protein names: OmpA-Like Transmembrane Domain-Containing Protein; Carbohydrate-Selective Porin Oprb; OmpA-Like Transmembrane Domain Protein; OmpA Domain-Containing Protein; Outer Membrane Protein A-Like; Carbohydrate-Selective Porin

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MRSFLPLSVTAPTRFRVPFLTAALLAIPATGAWAASPDGSPIAAPATAAADGDAPPEPRVALHAQTTYVWQRKPAFDAAY
TGPNSLVPTRERSYSFTATADLAVRPWEGGQLHFNPEAARGVPLSHLAGAGGLSNGELARSSGSQLKAYRARLFWLQRWN
AGGETEKIDADFNEMGGTATARRWTLVLGNVSLLDYFDPNPYAKDPREQFFNWSFLAPGPWDYAADARGYTWAGILEYRT
PQWAVRGGRGLQPRESNGPKLDRAWQRRYGDQIEAESDLPVALPAGPLRGRVLWFRNRAVMGAFDDAVALGQAAGTVPDV
GAVRRLQTKTGWAVTLEAPLGEDAGVFVRAGRSGGRQETFAFTEIDRQLSVGGQWSGAAWGRPADRMGAALAVNGLSGGH
RDYLAAGGQGAFLGDGALNYGRERVWEVYYRAVMPPVPTAAGALHSAVSLGAQRIRNPGYNRDRGPVDIVSVRLHAEF

Sequences:

>Translated_478_residues
MRSFLPLSVTAPTRFRVPFLTAALLAIPATGAWAASPDGSPIAAPATAAADGDAPPEPRVALHAQTTYVWQRKPAFDAAY
TGPNSLVPTRERSYSFTATADLAVRPWEGGQLHFNPEAARGVPLSHLAGAGGLSNGELARSSGSQLKAYRARLFWLQRWN
AGGETEKIDADFNEMGGTATARRWTLVLGNVSLLDYFDPNPYAKDPREQFFNWSFLAPGPWDYAADARGYTWAGILEYRT
PQWAVRGGRGLQPRESNGPKLDRAWQRRYGDQIEAESDLPVALPAGPLRGRVLWFRNRAVMGAFDDAVALGQAAGTVPDV
GAVRRLQTKTGWAVTLEAPLGEDAGVFVRAGRSGGRQETFAFTEIDRQLSVGGQWSGAAWGRPADRMGAALAVNGLSGGH
RDYLAAGGQGAFLGDGALNYGRERVWEVYYRAVMPPVPTAAGALHSAVSLGAQRIRNPGYNRDRGPVDIVSVRLHAEF
>Mature_478_residues
MRSFLPLSVTAPTRFRVPFLTAALLAIPATGAWAASPDGSPIAAPATAAADGDAPPEPRVALHAQTTYVWQRKPAFDAAY
TGPNSLVPTRERSYSFTATADLAVRPWEGGQLHFNPEAARGVPLSHLAGAGGLSNGELARSSGSQLKAYRARLFWLQRWN
AGGETEKIDADFNEMGGTATARRWTLVLGNVSLLDYFDPNPYAKDPREQFFNWSFLAPGPWDYAADARGYTWAGILEYRT
PQWAVRGGRGLQPRESNGPKLDRAWQRRYGDQIEAESDLPVALPAGPLRGRVLWFRNRAVMGAFDDAVALGQAAGTVPDV
GAVRRLQTKTGWAVTLEAPLGEDAGVFVRAGRSGGRQETFAFTEIDRQLSVGGQWSGAAWGRPADRMGAALAVNGLSGGH
RDYLAAGGQGAFLGDGALNYGRERVWEVYYRAVMPPVPTAAGALHSAVSLGAQRIRNPGYNRDRGPVDIVSVRLHAEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 51498; Mature: 51498

Theoretical pI: Translated: 9.73; Mature: 9.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRSFLPLSVTAPTRFRVPFLTAALLAIPATGAWAASPDGSPIAAPATAAADGDAPPEPRV
CCCEEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ALHAQTTYVWQRKPAFDAAYTGPNSLVPTRERSYSFTATADLAVRPWEGGQLHFNPEAAR
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCEEEECCHHHC
GVPLSHLAGAGGLSNGELARSSGSQLKAYRARLFWLQRWNAGGETEKIDADFNEMGGTAT
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCEEECCCHHHCCCCCC
ARRWTLVLGNVSLLDYFDPNPYAKDPREQFFNWSFLAPGPWDYAADARGYTWAGILEYRT
CEEEEEEEECEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEEECC
PQWAVRGGRGLQPRESNGPKLDRAWQRRYGDQIEAESDLPVALPAGPLRGRVLWFRNRAV
CCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEECCEE
MGAFDDAVALGQAAGTVPDVGAVRRLQTKTGWAVTLEAPLGEDAGVFVRAGRSGGRQETF
ECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEE
AFTEIDRQLSVGGQWSGAAWGRPADRMGAALAVNGLSGGHRDYLAAGGQGAFLGDGALNY
EHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHEECCCCCCEEECCHHHH
GRERVWEVYYRAVMPPVPTAAGALHSAVSLGAQRIRNPGYNRDRGPVDIVSVRLHAEF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECC
>Mature Secondary Structure
MRSFLPLSVTAPTRFRVPFLTAALLAIPATGAWAASPDGSPIAAPATAAADGDAPPEPRV
CCCEEEEEECCCCEECHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCE
ALHAQTTYVWQRKPAFDAAYTGPNSLVPTRERSYSFTATADLAVRPWEGGQLHFNPEAAR
EEEEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEECEEEECCCCCEEEECCHHHC
GVPLSHLAGAGGLSNGELARSSGSQLKAYRARLFWLQRWNAGGETEKIDADFNEMGGTAT
CCCHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEECCCCCCCEEECCCHHHCCCCCC
ARRWTLVLGNVSLLDYFDPNPYAKDPREQFFNWSFLAPGPWDYAADARGYTWAGILEYRT
CEEEEEEEECEEEEECCCCCCCCCCHHHHHCCEEEECCCCCCCCCCCCCCEEEEEEEECC
PQWAVRGGRGLQPRESNGPKLDRAWQRRYGDQIEAESDLPVALPAGPLRGRVLWFRNRAV
CCCEECCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCCCEEECCCCCCCEEEEEECCEE
MGAFDDAVALGQAAGTVPDVGAVRRLQTKTGWAVTLEAPLGEDAGVFVRAGRSGGRQETF
ECCCHHHHHHHHCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCCEEEEECCCCCCCCEE
AFTEIDRQLSVGGQWSGAAWGRPADRMGAALAVNGLSGGHRDYLAAGGQGAFLGDGALNY
EHHHHHHHHCCCCCCCCCCCCCCHHHCCCEEEEECCCCCCCHHEECCCCCCEEECCHHHH
GRERVWEVYYRAVMPPVPTAAGALHSAVSLGAQRIRNPGYNRDRGPVDIVSVRLHAEF
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA