| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612909
Identifier: 120612909
GI number: 120612909
Start: 4734854
End: 4735612
Strand: Direct
Name: 120612909
Synonym: Aave_4273
Alternate gene names: NA
Gene position: 4734854-4735612 (Clockwise)
Preceding gene: 120612908
Following gene: 120612910
Centisome position: 88.46
GC content: 74.84
Gene sequence:
>759_bases ATGAAGATCGCCCTGCTGTCCGACATCCACGCCAACCGACAGGCGCTCGAGGCCTGCCTCGCGCATGCGCGCGCCCAGGG CGCGGAACAGTTCGCACTGCTCGGCGACCTGGTGGGCTACGGCGGCGATCCGGTGGCCGTGGTCGATGCCGTGATGGAGC TGGCCGCGCAGGGCGCTCCCTGCGTGATGGGCAACCACGACGCGGCCGCGCTGGACCCGCCCGTGGACTCGCCCCTGCTG GGCGAGCAGAGCGCGCAGTGGACGCATGCGCAGCTCGCGCCCCGGCACTGCGAGTTCCTCGCGGGCCTGCCGCTCACGCG CCGGCTGGGCGCATCGGCCCTGCTGGTGCATGCCAGCGCGGACGATCCCGCGCACTGGCACTACGTGCACGACGCGGGCG CGGCGGAACGCAGCATGGCCGCCGCGAGCCGGCTCGACCCGGCGATCCGCTACGTGTTCTGCGGCCATGTGCACGAGCAG GCGCTCTACTTCCTCACCCCCACGGCCAAGCTCATGCGCTTCGCGCCGCAGCCCGGCGTGGCCGTGCCCGTGCCGCCGCA CCGCCAGTGGCTGGCGGTGGCCGGCTCGGTGGGCCAGCCGCGCGACCGCGACGTGCGCGCCATGTACGCGCTGTTCGACG ACGGCGCCGCCACGATCACCTTCCACCGCGTGCCCTACGACCACGCGGCCGCGGCGGCGGCCGTGCGCGCCGCGGGGCTG CCCGCCTTCTTCGCGGACCGGCTCGAGGAAGGCCGCTGA
Upstream 100 bases:
>100_bases AGAAACGGACGTTTCCGAGCCATCATGTCGGGCTGCGCTCCCGCCTCTCCAGCATTCCACGCTCCCCGATCCACGACGGC CTTCTGCGCCTGCGCCCGCC
Downstream 100 bases:
>100_bases CCCGGCCGGCCCCTCCATGAAGCTGCTCGCTCCCGGCACCGCGGTGGACGGATTCGTGGTGCACGAGTGCCTGCACGCGG GCGGCATGGCGCATATCTAC
Product: bis(5'nucleosyl)-tetraphosphatase ApaH
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MKIALLSDIHANRQALEACLAHARAQGAEQFALLGDLVGYGGDPVAVVDAVMELAAQGAPCVMGNHDAAALDPPVDSPLL GEQSAQWTHAQLAPRHCEFLAGLPLTRRLGASALLVHASADDPAHWHYVHDAGAAERSMAAASRLDPAIRYVFCGHVHEQ ALYFLTPTAKLMRFAPQPGVAVPVPPHRQWLAVAGSVGQPRDRDVRAMYALFDDGAATITFHRVPYDHAAAAAAVRAAGL PAFFADRLEEGR
Sequences:
>Translated_252_residues MKIALLSDIHANRQALEACLAHARAQGAEQFALLGDLVGYGGDPVAVVDAVMELAAQGAPCVMGNHDAAALDPPVDSPLL GEQSAQWTHAQLAPRHCEFLAGLPLTRRLGASALLVHASADDPAHWHYVHDAGAAERSMAAASRLDPAIRYVFCGHVHEQ ALYFLTPTAKLMRFAPQPGVAVPVPPHRQWLAVAGSVGQPRDRDVRAMYALFDDGAATITFHRVPYDHAAAAAAVRAAGL PAFFADRLEEGR >Mature_252_residues MKIALLSDIHANRQALEACLAHARAQGAEQFALLGDLVGYGGDPVAVVDAVMELAAQGAPCVMGNHDAAALDPPVDSPLL GEQSAQWTHAQLAPRHCEFLAGLPLTRRLGASALLVHASADDPAHWHYVHDAGAAERSMAAASRLDPAIRYVFCGHVHEQ ALYFLTPTAKLMRFAPQPGVAVPVPPHRQWLAVAGSVGQPRDRDVRAMYALFDDGAATITFHRVPYDHAAAAAAVRAAGL PAFFADRLEEGR
Specific function: Unknown
COG id: COG0639
COG function: function code T; Diadenosine tetraphosphatase and related serine/threonine protein phosphatases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 - InterPro: IPR011152 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 26792; Mature: 26792
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALLSDIHANRQALEACLAHARAQGAEQFALLGDLVGYGGDPVAVVDAVMELAAQGAP CEEEEEHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC CVMGNHDAAALDPPVDSPLLGEQSAQWTHAQLAPRHCEFLAGLPLTRRLGASALLVHASA EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCHHHHCCCEEEEEEECC DDPAHWHYVHDAGAAERSMAAASRLDPAIRYVFCGHVHEQALYFLTPTAKLMRFAPQPGV CCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCHHHCEEEEECCHHHHHHCCCCCCC AVPVPPHRQWLAVAGSVGQPRDRDVRAMYALFDDGAATITFHRVPYDHAAAAAAVRAAGL CCCCCCCHHHHEEECCCCCCCCCHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHCCC PAFFADRLEEGR HHHHHHHHHCCC >Mature Secondary Structure MKIALLSDIHANRQALEACLAHARAQGAEQFALLGDLVGYGGDPVAVVDAVMELAAQGAP CEEEEEHHHHCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCC CVMGNHDAAALDPPVDSPLLGEQSAQWTHAQLAPRHCEFLAGLPLTRRLGASALLVHASA EEECCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHCCCHHHHCCCEEEEEEECC DDPAHWHYVHDAGAAERSMAAASRLDPAIRYVFCGHVHEQALYFLTPTAKLMRFAPQPGV CCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHCCHHHCEEEEECCHHHHHHCCCCCCC AVPVPPHRQWLAVAGSVGQPRDRDVRAMYALFDDGAATITFHRVPYDHAAAAAAVRAAGL CCCCCCCHHHHEEECCCCCCCCCHHHHHEEEECCCCEEEEEEECCCHHHHHHHHHHHCCC PAFFADRLEEGR HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]