| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is ohr [H]
Identifier: 120612908
GI number: 120612908
Start: 4733993
End: 4734409
Strand: Direct
Name: ohr [H]
Synonym: Aave_4272
Alternate gene names: 120612908
Gene position: 4733993-4734409 (Clockwise)
Preceding gene: 120612907
Following gene: 120612909
Centisome position: 88.44
GC content: 68.35
Gene sequence:
>417_bases ATGACCACGCTCGACAAAGTTCTCTACACCGCCCGCGCCCACACCACCGGCGGCCGCGACGGCGCCTCTCGCAGCGATGA CGGCCGCCTGGACGTGAAGCTGTCGTCCCCCGGCACCAGCGGTACGGGCACCAACCCCGAGCAGCTCTTCGCCGCCGGCT ACTCCGCCTGCTTCATCGGCGCCATGAAGGCCGTGGCCGGCAAGGTCGGCGTCACCATTCCGCAGGACCTGGCCATCGAC GCCGAAGTGGACCTGGGCCAGATCCCCAACGCCTATGGCATCGCCGTCCGCCTGAAGGTGTCCCTGCCCGGCGTGGACAA GGCCAAGGCGCAGGAACTGGTGGATGCAGCCCACCAGGTCTGCCCCTACTCCAATGCCACGCGCGGCAACATCGACGTGA CGATCACGCTGGCCTGA
Upstream 100 bases:
>100_bases CGCAGCTGCGCGAACGGCTCTCCCGCAGCCCGGGCTGACCGCCGCCACCGCGGCGCGCCCGTTCCTTTGTTCTTTCGTCC ATCAACCCCAAGGAGTCCAC
Downstream 100 bases:
>100_bases TCCCCGCGATCGCCGGCCGGCCGCCCGCCAGCCGGGCACGCGACAGCGATCACACTCCAGCACGCCACGCCGGCGGCACG CGCACGATGACCGCCTATCC
Product: OsmC family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 138; Mature: 137
Protein sequence:
>138_residues MTTLDKVLYTARAHTTGGRDGASRSDDGRLDVKLSSPGTSGTGTNPEQLFAAGYSACFIGAMKAVAGKVGVTIPQDLAID AEVDLGQIPNAYGIAVRLKVSLPGVDKAKAQELVDAAHQVCPYSNATRGNIDVTITLA
Sequences:
>Translated_138_residues MTTLDKVLYTARAHTTGGRDGASRSDDGRLDVKLSSPGTSGTGTNPEQLFAAGYSACFIGAMKAVAGKVGVTIPQDLAID AEVDLGQIPNAYGIAVRLKVSLPGVDKAKAQELVDAAHQVCPYSNATRGNIDVTITLA >Mature_137_residues TTLDKVLYTARAHTTGGRDGASRSDDGRLDVKLSSPGTSGTGTNPEQLFAAGYSACFIGAMKAVAGKVGVTIPQDLAIDA EVDLGQIPNAYGIAVRLKVSLPGVDKAKAQELVDAAHQVCPYSNATRGNIDVTITLA
Specific function: Organic hydroperoxide detoxification protein. Confers increased resistance to tert-butyl hydroperoxide killing [H]
COG id: COG1764
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the osmC/ohr family [H]
Homologues:
None
Paralogues:
None
Copy number: 3180 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015946 - InterPro: IPR019953 - InterPro: IPR003718 [H]
Pfam domain/function: PF02566 OsmC [H]
EC number: NA
Molecular weight: Translated: 14218; Mature: 14087
Theoretical pI: Translated: 6.51; Mature: 6.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLDKVLYTARAHTTGGRDGASRSDDGRLDVKLSSPGTSGTGTNPEQLFAAGYSACFIG CCHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCHHHHHHH AMKAVAGKVGVTIPQDLAIDAEVDLGQIPNAYGIAVRLKVSLPGVDKAKAQELVDAAHQV HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH CPYSNATRGNIDVTITLA CCCCCCCCCCEEEEEEEC >Mature Secondary Structure TTLDKVLYTARAHTTGGRDGASRSDDGRLDVKLSSPGTSGTGTNPEQLFAAGYSACFIG CHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHCHHHHHHH AMKAVAGKVGVTIPQDLAIDAEVDLGQIPNAYGIAVRLKVSLPGVDKAKAQELVDAAHQV HHHHHHCCCCCCCCCCCEEECCCCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHHHHH CPYSNATRGNIDVTITLA CCCCCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12024217 [H]