| Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
|---|---|
| Accession | NC_008752 |
| Length | 5,352,772 |
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The map label for this gene is 120612903
Identifier: 120612903
GI number: 120612903
Start: 4729907
End: 4730797
Strand: Direct
Name: 120612903
Synonym: Aave_4267
Alternate gene names: NA
Gene position: 4729907-4730797 (Clockwise)
Preceding gene: 120612902
Following gene: 120612904
Centisome position: 88.36
GC content: 72.62
Gene sequence:
>891_bases ATGCCCGACTACCTTCCCTTCGATCCCCATCCCCGCGCGCCCGTGCCGCTGCCGCCGCCACTGGCCTGCGACAGCCAGTT CCACGTCTTCGGCCCGCGCGACCGCTACCCCGTGCGCGCCGGCGCGGCCTACGAGATGCCCACGGCCACGTGGGAGGTCG CGCAGCGGCTGCACGCCACGCTGGGCATCGCGCGCGGCGTGATCGTGCAGGCCACCACCTACGGTGCCGACCATGCGGTG GTGCTGGACGCACTCGCCGCGCTCAACGCGGACGGTCCGCGCCGCTACATGGGCTGCGCCAACGCCGCCGTGCTGCTGGA GCGCGACGACGCCTACCTGCAGACGCTCCACGATGCGGGCGTGCGCGGTGCGCGTTTCACGCGCGGTGGCCTCGGCATCC AGTTCACGGCCGACCAGATGGACCGCGCCCTGTCGCGCGTGCGCGAACTGGGCTGGTACGTGAAGGTGCAGCCCGAGCCT TCCGGGATCGCCGGGCAGATGCGCGCCTTCGACGCGCTGCGCGACGTGCCGGTGGTCATGGACCACATGGGCCGCGCGGA CCCGGCGCTCGGCGAGGCGGACCCGAACCTCGCCTGCATGCGGGAGCTGCTCGCGCGCGGCAATTACTGGGTCATGCTGT CGCTGTCCGAGAAGCTCTCGCACGAGGGCCCGCCCTGGAACGACGTGGTGCCGCTCGCGCAGCGGCTGATCGCGGCGGCG CCGGAGCGCTGCATCTGGGGCAGCGACTGGCCGCATCCCGTCTCGGTCAGGCAGCCGCCCAACGAGGGCAGCCTGCTGGA ACTGCTCTACCGCTTCGCGCCCGACGCCGCCGTGCGCGAGCGCATCCTCGTCACCAACCCGGCACGGCTCTTCGGATTCG ACACGCCATGA
Upstream 100 bases:
>100_bases GCTCCCGCGTCCCTTCTGGCGTCGTTGCCGCATCTTGACCGCCCGCGATGCGGCGCCGCGCCCGTGCCCTCTCAATCGTC CACGCATTGAAAACGACCCG
Downstream 100 bases:
>100_bases AGCTTCTTTCCTTTCTCACAGGCGGCCAGGTACGCTGGGGCGCCGCCACGCCGGACGGCATCGTCGATCTGGGCCGGCGC CTGCCCGCGTTCGGCAGCGT
Product: amidohydrolase 2
Products: NA
Alternate protein names: Hydrolase; Amidohydrolase; Dicarboxylic Acid Hydrolase; 2-Pyrone-4 6-Dicarbaxylate Hydrolase; 2-Pyrone-4 6-Dicarboxylate Hydrolase; Metal-Dependent Hydrolase; 2-Pyrone-4 6-Dicarboxylate Lactonase; Hydrolase Amidohydrolase 2 Motif; Transcriptional Regulator GntR; Aminohydrolase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase Of TIM-Barrel Fold Family; Amidohydrolase 2 Family; Amidohydrolase Family; Exported Protein
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MPDYLPFDPHPRAPVPLPPPLACDSQFHVFGPRDRYPVRAGAAYEMPTATWEVAQRLHATLGIARGVIVQATTYGADHAV VLDALAALNADGPRRYMGCANAAVLLERDDAYLQTLHDAGVRGARFTRGGLGIQFTADQMDRALSRVRELGWYVKVQPEP SGIAGQMRAFDALRDVPVVMDHMGRADPALGEADPNLACMRELLARGNYWVMLSLSEKLSHEGPPWNDVVPLAQRLIAAA PERCIWGSDWPHPVSVRQPPNEGSLLELLYRFAPDAAVRERILVTNPARLFGFDTP
Sequences:
>Translated_296_residues MPDYLPFDPHPRAPVPLPPPLACDSQFHVFGPRDRYPVRAGAAYEMPTATWEVAQRLHATLGIARGVIVQATTYGADHAV VLDALAALNADGPRRYMGCANAAVLLERDDAYLQTLHDAGVRGARFTRGGLGIQFTADQMDRALSRVRELGWYVKVQPEP SGIAGQMRAFDALRDVPVVMDHMGRADPALGEADPNLACMRELLARGNYWVMLSLSEKLSHEGPPWNDVVPLAQRLIAAA PERCIWGSDWPHPVSVRQPPNEGSLLELLYRFAPDAAVRERILVTNPARLFGFDTP >Mature_295_residues PDYLPFDPHPRAPVPLPPPLACDSQFHVFGPRDRYPVRAGAAYEMPTATWEVAQRLHATLGIARGVIVQATTYGADHAVV LDALAALNADGPRRYMGCANAAVLLERDDAYLQTLHDAGVRGARFTRGGLGIQFTADQMDRALSRVRELGWYVKVQPEPS GIAGQMRAFDALRDVPVVMDHMGRADPALGEADPNLACMRELLARGNYWVMLSLSEKLSHEGPPWNDVVPLAQRLIAAAP ERCIWGSDWPHPVSVRQPPNEGSLLELLYRFAPDAAVRERILVTNPARLFGFDTP
Specific function: Unknown
COG id: COG3618
COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32558; Mature: 32426
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDYLPFDPHPRAPVPLPPPLACDSQFHVFGPRDRYPVRAGAAYEMPTATWEVAQRLHAT CCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGIARGVIVQATTYGADHAVVLDALAALNADGPRRYMGCANAAVLLERDDAYLQTLHDAG HHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCHHHHHHHHHCC VRGARFTRGGLGIQFTADQMDRALSRVRELGWYVKVQPEPSGIAGQMRAFDALRDVPVVM CCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCHHHH DHMGRADPALGEADPNLACMRELLARGNYWVMLSLSEKLSHEGPPWNDVVPLAQRLIAAA HHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHC PERCIWGSDWPHPVSVRQPPNEGSLLELLYRFAPDAAVRERILVTNPARLFGFDTP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCEEEEECCHHHCCCCCC >Mature Secondary Structure PDYLPFDPHPRAPVPLPPPLACDSQFHVFGPRDRYPVRAGAAYEMPTATWEVAQRLHAT CCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHH LGIARGVIVQATTYGADHAVVLDALAALNADGPRRYMGCANAAVLLERDDAYLQTLHDAG HHHHCCEEEEEEECCCCHHHHHHHHHHHCCCCCHHHHHHCCEEEEEECCHHHHHHHHHCC VRGARFTRGGLGIQFTADQMDRALSRVRELGWYVKVQPEPSGIAGQMRAFDALRDVPVVM CCCCEEECCCCEEEEEHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCHHHH DHMGRADPALGEADPNLACMRELLARGNYWVMLSLSEKLSHEGPPWNDVVPLAQRLIAAA HHCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEHHHHCCCCCCCCHHHHHHHHHHHHC PERCIWGSDWPHPVSVRQPPNEGSLLELLYRFAPDAAVRERILVTNPARLFGFDTP CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHCEEEEECCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA