Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612893
Identifier: 120612893
GI number: 120612893
Start: 4719283
End: 4721187
Strand: Reverse
Name: 120612893
Synonym: Aave_4257
Alternate gene names: NA
Gene position: 4721187-4719283 (Counterclockwise)
Preceding gene: 120612894
Following gene: 120612892
Centisome position: 88.2
GC content: 71.44
Gene sequence:
>1905_bases ATGCTGCAATTTCAATACAACAGGCAGTGGTTGGCATGGGGCGCGGGGCTGGCGTGCGCCCTGGCGGCAGGTGGGGCGAT GGCCGGGCCGGACGCCGCGGGCGGCGTGGTGGTCCGGCCGGAAAGCGCCGGGGTGGCGGCGATGGAGGAGGGGTCCTTCA TCGATCCGCAGTTGAAGATGCTCTGGGGAGAGCATCTGCGCCGCGGCGGCAACCTGGTCGTTCCCGCGGATGCCGCGAGA GGCTTCGTCGGCCCGCGGGTGGTGGACGGCATGGTGCGCATCGAGGCCCTGTCGCTCGGCGACGATGCCGCACTGGCGGA CGAATTGCGCCGGCTGGGTGCCAAGGATGTGCGCCAGCAGGGCAACCTGGTGCTGGGCCGGATGCCCGTGGCCGGCCTGG GCGCGCTGCAGTCGCTGCGCACGGCGCGCTTCGTGCGGCGGGCGCCTGAGCCTTTCGGCAGCGTGGGCGCGGTGACGTCG CAGGGGGACGCGGTGCAGGGCTCCGAGCGCGCGCGGCGCACCTTCGGCGTGGATGGATCGGGCGTGGTGGTGGGTGTGAC CTCCACCGGCTACGACACGCAGGGCGGCGCGGCCACGGACGTGGCGCGCGGCGACCTGCCAGGGCGCGGCAATCCCAACG GCCGCCTTCAGCCCGTGCGCGTGCTGAAGGACCGCGATGGCAGGGACAGCGACGAGGGCCGCGCCATGGCGCAGATCATC CACGACGTCGCCCCCGGCGCTTCCCTGGCGGTCTATATCCCCGAGAGCGTCCAGGACCATGCCGACGGCCTGCGCGCCCT CGCGAAGGCAGGCGCCAACGTCATCAGCGACGACATGTTCTGGACCAACGACCCCTGGTTCCAGGAGAGCCCGATCGGCG TTGCCCAGCGGGAGCTTCTTGCCAGCGGGAACGTGCTCTCCATCAGTGCCGCGACCAACTTCGCCGACTGGTCCGCCGAA GGCCGGTTCCAGCCCCTGCCCGCACGCGGGCTGACGATGGGAGGGGCGGCGGCGGGCCGCTGGCGGATGCACGACTGGGG CGGAGGGCACACCACCTTTCCGGTCACCCTGCACCGCGGCGGCCGGTTGCGCATCGTGATGCAATGGGACGAGCCTTTCG CCTCGTTCACCCGGTCCCGCTCCGGCTCGGCCTCCGACCTGGACCTGTTCGTATTCGCCGACGACCACAGCGGGAATATC TCCTATGTCTCCGCCACGCGAAACGTCGGCGGTGATCCGTTCGAGTTCGTCTTCGCCTTCCTGAATCCGGACGCGGCCGA CGCGGCCTTCACCATCCACATCGGCGTCGGCATGCCCGAAGGCATCGGCCGGCTGCCCGGCCGTTTCAAGCTGATCGCGC AGCCCAACGACATGGCGCTGGTGGACTGGCCGCGCGATGCGGCCTTCCACTCCGCGACCGCCGTGGGCCACAACGCGTCG GAGGGCGCCATCATCGCGTGCGCCGTGCGCCATTCGCAGATGAACACGCCGCGCGGGCCGCTGGCCGAGCCGTTCTCTTC CACCGGCGGCTTCGCGCGCACACGCGACGCGGACGGGGTGGTGCTGTCCCGTCCGCTCGATACGCACAAGCCGGATCTCT GCGCTCCCGACGGGGTGGACAACTCGGTCTTCGGCGTGGACACGGACGGCAATGGCTGGCCGAATTTCTTCGGCACCTCC GCCGCCTCGCCCCACCTGGCCGGCATCGCCGCCCTGATGCTGCAGGCCTCGGGCATGAAGATGCGCGCCGACGAGGTGGG GCGGGCGCTGCGCGAGACGGCGCGCGACATGGCGGACCCCGGCGACCCGCTCAGCGCGCCCGGCTATGACGTTCGCTCGG GCCAGGGCTTCGTCGATACCGAACGCGCGGTGAAGCGGGCGATGGCCCTGCGCGACCGGCCCTGA
Upstream 100 bases:
>100_bases CGGCCGTCCGGGCCGCGGCGTGACCGCTGGCGGCAGGCTGTGCCTGGACGATTCGATGAACGGATGTCCATGGCGCGAAG CGCCGTACGAGGTATCTCGG
Downstream 100 bases:
>100_bases GGCGCCGCGAAGGCCGCCGTGGCAGGCCCCATGGCGGCCGATGAGGTGCCAAGCCGCCAAGGCTTCGCGTCACTTTATGG CAAGCTCGGTCTTTTGACGC
Product: fibronectin type III domain-containing protein
Products: NA
Alternate protein names: Fibronectin Type III Domain-Containing Protein; Peptidase S8 And; Cell Surface Protein; TPR Repeat-Containing Protein; Subtilisin-Like Protease; Peptidase Families S8 And
Number of amino acids: Translated: 634; Mature: 634
Protein sequence:
>634_residues MLQFQYNRQWLAWGAGLACALAAGGAMAGPDAAGGVVVRPESAGVAAMEEGSFIDPQLKMLWGEHLRRGGNLVVPADAAR GFVGPRVVDGMVRIEALSLGDDAALADELRRLGAKDVRQQGNLVLGRMPVAGLGALQSLRTARFVRRAPEPFGSVGAVTS QGDAVQGSERARRTFGVDGSGVVVGVTSTGYDTQGGAATDVARGDLPGRGNPNGRLQPVRVLKDRDGRDSDEGRAMAQII HDVAPGASLAVYIPESVQDHADGLRALAKAGANVISDDMFWTNDPWFQESPIGVAQRELLASGNVLSISAATNFADWSAE GRFQPLPARGLTMGGAAAGRWRMHDWGGGHTTFPVTLHRGGRLRIVMQWDEPFASFTRSRSGSASDLDLFVFADDHSGNI SYVSATRNVGGDPFEFVFAFLNPDAADAAFTIHIGVGMPEGIGRLPGRFKLIAQPNDMALVDWPRDAAFHSATAVGHNAS EGAIIACAVRHSQMNTPRGPLAEPFSSTGGFARTRDADGVVLSRPLDTHKPDLCAPDGVDNSVFGVDTDGNGWPNFFGTS AASPHLAGIAALMLQASGMKMRADEVGRALRETARDMADPGDPLSAPGYDVRSGQGFVDTERAVKRAMALRDRP
Sequences:
>Translated_634_residues MLQFQYNRQWLAWGAGLACALAAGGAMAGPDAAGGVVVRPESAGVAAMEEGSFIDPQLKMLWGEHLRRGGNLVVPADAAR GFVGPRVVDGMVRIEALSLGDDAALADELRRLGAKDVRQQGNLVLGRMPVAGLGALQSLRTARFVRRAPEPFGSVGAVTS QGDAVQGSERARRTFGVDGSGVVVGVTSTGYDTQGGAATDVARGDLPGRGNPNGRLQPVRVLKDRDGRDSDEGRAMAQII HDVAPGASLAVYIPESVQDHADGLRALAKAGANVISDDMFWTNDPWFQESPIGVAQRELLASGNVLSISAATNFADWSAE GRFQPLPARGLTMGGAAAGRWRMHDWGGGHTTFPVTLHRGGRLRIVMQWDEPFASFTRSRSGSASDLDLFVFADDHSGNI SYVSATRNVGGDPFEFVFAFLNPDAADAAFTIHIGVGMPEGIGRLPGRFKLIAQPNDMALVDWPRDAAFHSATAVGHNAS EGAIIACAVRHSQMNTPRGPLAEPFSSTGGFARTRDADGVVLSRPLDTHKPDLCAPDGVDNSVFGVDTDGNGWPNFFGTS AASPHLAGIAALMLQASGMKMRADEVGRALRETARDMADPGDPLSAPGYDVRSGQGFVDTERAVKRAMALRDRP >Mature_634_residues MLQFQYNRQWLAWGAGLACALAAGGAMAGPDAAGGVVVRPESAGVAAMEEGSFIDPQLKMLWGEHLRRGGNLVVPADAAR GFVGPRVVDGMVRIEALSLGDDAALADELRRLGAKDVRQQGNLVLGRMPVAGLGALQSLRTARFVRRAPEPFGSVGAVTS QGDAVQGSERARRTFGVDGSGVVVGVTSTGYDTQGGAATDVARGDLPGRGNPNGRLQPVRVLKDRDGRDSDEGRAMAQII HDVAPGASLAVYIPESVQDHADGLRALAKAGANVISDDMFWTNDPWFQESPIGVAQRELLASGNVLSISAATNFADWSAE GRFQPLPARGLTMGGAAAGRWRMHDWGGGHTTFPVTLHRGGRLRIVMQWDEPFASFTRSRSGSASDLDLFVFADDHSGNI SYVSATRNVGGDPFEFVFAFLNPDAADAAFTIHIGVGMPEGIGRLPGRFKLIAQPNDMALVDWPRDAAFHSATAVGHNAS EGAIIACAVRHSQMNTPRGPLAEPFSSTGGFARTRDADGVVLSRPLDTHKPDLCAPDGVDNSVFGVDTDGNGWPNFFGTS AASPHLAGIAALMLQASGMKMRADEVGRALRETARDMADPGDPLSAPGYDVRSGQGFVDTERAVKRAMALRDRP
Specific function: Unknown
COG id: COG1404
COG function: function code O; Subtilisin-like serine proteases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 66822; Mature: 66822
Theoretical pI: Translated: 6.07; Mature: 6.07
Prosite motif: PS00138 SUBTILASE_SER
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLQFQYNRQWLAWGAGLACALAAGGAMAGPDAAGGVVVRPESAGVAAMEEGSFIDPQLKM CCEEEECCEEEECCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHH LWGEHLRRGGNLVVPADAARGFVGPRVVDGMVRIEALSLGDDAALADELRRLGAKDVRQQ HHHHHHHCCCCEEEECHHHCCCCCHHHHCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHC GNLVLGRMPVAGLGALQSLRTARFVRRAPEPFGSVGAVTSQGDAVQGSERARRTFGVDGS CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GVVVGVTSTGYDTQGGAATDVARGDLPGRGNPNGRLQPVRVLKDRDGRDSDEGRAMAQII CEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH HDVAPGASLAVYIPESVQDHADGLRALAKAGANVISDDMFWTNDPWFQESPIGVAQRELL HHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHH ASGNVLSISAATNFADWSAEGRFQPLPARGLTMGGAAAGRWRMHDWGGGHTTFPVTLHRG HCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEEEEEEEECC GRLRIVMQWDEPFASFTRSRSGSASDLDLFVFADDHSGNISYVSATRNVGGDPFEFVFAF CEEEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHEEEE LNPDAADAAFTIHIGVGMPEGIGRLPGRFKLIAQPNDMALVDWPRDAAFHSATAVGHNAS ECCCCCCEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCC EGAIIACAVRHSQMNTPRGPLAEPFSSTGGFARTRDADGVVLSRPLDTHKPDLCAPDGVD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC NSVFGVDTDGNGWPNFFGTSAASPHLAGIAALMLQASGMKMRADEVGRALRETARDMADP CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCC GDPLSAPGYDVRSGQGFVDTERAVKRAMALRDRP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure MLQFQYNRQWLAWGAGLACALAAGGAMAGPDAAGGVVVRPESAGVAAMEEGSFIDPQLKM CCEEEECCEEEECCCCHHHHHHCCCCCCCCCCCCCEEECCCCCCEEEECCCCCCCHHHHH LWGEHLRRGGNLVVPADAARGFVGPRVVDGMVRIEALSLGDDAALADELRRLGAKDVRQQ HHHHHHHCCCCEEEECHHHCCCCCHHHHCCEEEEEEEECCCCHHHHHHHHHCCHHHHHHC GNLVLGRMPVAGLGALQSLRTARFVRRAPEPFGSVGAVTSQGDAVQGSERARRTFGVDGS CCEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCC GVVVGVTSTGYDTQGGAATDVARGDLPGRGNPNGRLQPVRVLKDRDGRDSDEGRAMAQII CEEEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHH HDVAPGASLAVYIPESVQDHADGLRALAKAGANVISDDMFWTNDPWFQESPIGVAQRELL HHHCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCCCCCCHHHHHHH ASGNVLSISAATNFADWSAEGRFQPLPARGLTMGGAAAGRWRMHDWGGGHTTFPVTLHRG HCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEECCCCCCCEEEEECCCCCEEEEEEEECC GRLRIVMQWDEPFASFTRSRSGSASDLDLFVFADDHSGNISYVSATRNVGGDPFEFVFAF CEEEEEEECCCHHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCHHHHEEEE LNPDAADAAFTIHIGVGMPEGIGRLPGRFKLIAQPNDMALVDWPRDAAFHSATAVGHNAS ECCCCCCEEEEEEEECCCCHHHHCCCCCEEEEECCCCEEEEECCCCHHHHHHHHCCCCCC EGAIIACAVRHSQMNTPRGPLAEPFSSTGGFARTRDADGVVLSRPLDTHKPDLCAPDGVD CCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCC NSVFGVDTDGNGWPNFFGTSAASPHLAGIAALMLQASGMKMRADEVGRALRETARDMADP CCEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEECHHHHHHHHHHHHHHHCCC GDPLSAPGYDVRSGQGFVDTERAVKRAMALRDRP CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA