BacMap

Definition	Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession	NC_008752
Length	5,352,772

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The map label for this gene is dbpA [H]

Identifier: 120612881

GI number: 120612881

Start: 4702248

End: 4703681

Strand: Reverse

Name: dbpA [H]

Synonym: Aave_4245

Alternate gene names: 120612881

Gene position: 4703681-4702248 (Counterclockwise)

Preceding gene: 120612886

Following gene: 120612880

Centisome position: 87.87

GC content: 72.32

Gene sequence:

>1434_bases
ATGCAACCCTCCCCCCCTTCCCCGGCTCCCCGGGCCGCCGCGGCGTCCGCGGGCTTCGACGCCCTCGGGCTTTCCCCCGA
AGTGCTGGCCAACCTGCGCCAGCTCGGCTATGAGCGCATGACGCCCATCCAGGCGGCCAGCCTGCCGCCCGCCCTGCTGG
GCCGCGACCTGATCGCGCAGGCCAGCACCGGCAGCGGCAAGACGGCCGCCTTCGGGCTGGCCCTGCTGGAGCGCCTCAAT
CCGCGCCGCTTCGCCGTGCAGGCGCTGGTGCTCTGCCCCACGCGCGAACTGGCCGACCAGGTGGCGGCCGAGATCCGCCG
GCTGGCCCGCGCGCAGGAGAACATCAAGGTCGTCACCCTGTGCGGCGGCGTGCCGCTGCGCGGGCAGGCCGCGAGCCTGG
AGCATGGCGCGCACGTCGTCGTCGGCACGCCCGGCCGCGTGATGGACCACCTGGAGCGCGGCACGCTCGACCTGGGCGCG
CTGGCCACCTTCGTGCTGGACGAGGCCGACCGCATGCTCGACATGGGCTTCTCCGAAGACATCGCCCAGGTGGCGCGCCG
CTGCCCGGACACCCGCCAGACGCTGTTGTTCTCCGCCACCTATCCCGAAGGCATCGAGCGGATCGCGCGCCAGTTCATGA
AGGATCCACAGCGCATCGTGGTGCAGGCCCAGCATGCCGAGGGCAAGATCGGGCAGCGCTGGTACGAAGTGCAGGAGCGC
GAGCGCCTGCATGCCGTCTCGCAGCTGCTGAACCATTTCCGGCCGGAATCCGCCATCGCGTTCTGCAATACGAAGCAGCA
GTGCCGCGATCTCGTGGAGGTGCTGCGCGCGCAGGGATTCAGCGCCCTGGCCCTGCACGGCGACCTGGAGCAGCGCGACC
GCGACCAGGTGCTGGTGCAGTTCGCCAACCGCAGCTGCAGCGTGCTGGTGGCCACCGACGTGGCCGCGCGCGGCATCGAC
ATCGCCGGTCTGCAGGCCGTCATCAACGTGGACGTGGCGCCCGACCCGGAGGTGCACATCCACCGCATCGGCCGAACCGG
CCGTGCCGACGCGGAGGGCCTGGCGCTCAGCCTCGCGAGCCTGCCGGAGATGGGGCAGGTGGGCCGCATCGAGGTGCTGC
AGGGCCGCCCGTCGGAGTGGCACCCGCTCTCCGGCCTCACGCCCGCGCCGGGCGGGCCGCTGCAGCCGCCCATGGCCACC
ATCCAGATCATCGGCGGGCGCAAGGAGAAGATCCGCGCGGGCGATGTGCTGGGCGCGCTCACCGGCGAGATGGGTTTCAC
GCGCGAGCAGGTGGGCAAGATCAACGTGAACGACTTCTCCACCTACGTGGCGGTCGAGCGCAGCGTGGCCCGGCAGGCCG
CGCAGCGCCTCTCCTCCGGCCGCGTGAAGGGCCGCAGCGTCAAGGCGCGGCTGGTCGAGGACGGCGAGGGCTGA

Upstream 100 bases:

>100_bases
AAGGTGGGCTCTGTGAATTCTGGGATCTGGGCCATGGGCGTATTGTCCACGCCCGCCGCATGGCGCGTCCGGGAAAGGGC
CGGGCCGGGATAATCGGGCG

Downstream 100 bases:

>100_bases
AAGGTTCACGGCACGGTCCCATGGCGCTTGGCTGGGACGGCGCATGCTCGGGCAGAATCGCTCTACATTCCCGTCCGCTC
ATGATCGCTGCCCTGTCACC

Product: DEAD/DEAH box helicase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MQPSPPSPAPRAAAASAGFDALGLSPEVLANLRQLGYERMTPIQAASLPPALLGRDLIAQASTGSGKTAAFGLALLERLN
PRRFAVQALVLCPTRELADQVAAEIRRLARAQENIKVVTLCGGVPLRGQAASLEHGAHVVVGTPGRVMDHLERGTLDLGA
LATFVLDEADRMLDMGFSEDIAQVARRCPDTRQTLLFSATYPEGIERIARQFMKDPQRIVVQAQHAEGKIGQRWYEVQER
ERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLVQFANRSCSVLVATDVAARGID
IAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLASLPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMAT
IQIIGGRKEKIRAGDVLGALTGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGEG

Sequences:

>Translated_477_residues
MQPSPPSPAPRAAAASAGFDALGLSPEVLANLRQLGYERMTPIQAASLPPALLGRDLIAQASTGSGKTAAFGLALLERLN
PRRFAVQALVLCPTRELADQVAAEIRRLARAQENIKVVTLCGGVPLRGQAASLEHGAHVVVGTPGRVMDHLERGTLDLGA
LATFVLDEADRMLDMGFSEDIAQVARRCPDTRQTLLFSATYPEGIERIARQFMKDPQRIVVQAQHAEGKIGQRWYEVQER
ERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLVQFANRSCSVLVATDVAARGID
IAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLASLPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMAT
IQIIGGRKEKIRAGDVLGALTGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGEG
>Mature_477_residues
MQPSPPSPAPRAAAASAGFDALGLSPEVLANLRQLGYERMTPIQAASLPPALLGRDLIAQASTGSGKTAAFGLALLERLN
PRRFAVQALVLCPTRELADQVAAEIRRLARAQENIKVVTLCGGVPLRGQAASLEHGAHVVVGTPGRVMDHLERGTLDLGA
LATFVLDEADRMLDMGFSEDIAQVARRCPDTRQTLLFSATYPEGIERIARQFMKDPQRIVVQAQHAEGKIGQRWYEVQER
ERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLVQFANRSCSVLVATDVAARGID
IAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLASLPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMAT
IQIIGGRKEKIRAGDVLGALTGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGEG

Specific function: Has a helix-destabilizing activity, which is not coupled to the ATPase activity. Can unwind the 23S rRNA as well as 16S rRNA. Exhibits an RNA-dependent ATPase activity, specifically stimulated by bacterial 23S rRNA. Could play a major role in ribosome ass

COG id: COG0513

COG function: function code LKJ; Superfamily II DNA and RNA helicases

Gene ontology:

Cell location: Cytoplasm (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI45446747, Length=366, Percent_Identity=40.1639344262295, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI45446743, Length=366, Percent_Identity=40.1639344262295, Blast_Score=251, Evalue=1e-66,
Organism=Homo sapiens, GI164664518, Length=353, Percent_Identity=34.2776203966006, Blast_Score=241, Evalue=7e-64,
Organism=Homo sapiens, GI7661920, Length=344, Percent_Identity=36.3372093023256, Blast_Score=235, Evalue=7e-62,
Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=37.9781420765027, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI20149629, Length=362, Percent_Identity=35.3591160220994, Blast_Score=224, Evalue=1e-58,
Organism=Homo sapiens, GI21040371, Length=365, Percent_Identity=33.4246575342466, Blast_Score=223, Evalue=3e-58,
Organism=Homo sapiens, GI262118318, Length=359, Percent_Identity=36.7688022284123, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=36.7688022284123, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI4758112, Length=349, Percent_Identity=34.0974212034384, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI18375623, Length=349, Percent_Identity=34.0974212034384, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=36.7688022284123, Blast_Score=221, Evalue=1e-57,
Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=36.7688022284123, Blast_Score=221, Evalue=2e-57,
Organism=Homo sapiens, GI224593278, Length=361, Percent_Identity=37.6731301939058, Blast_Score=219, Evalue=4e-57,
Organism=Homo sapiens, GI4758138, Length=373, Percent_Identity=36.1930294906166, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI4503529, Length=370, Percent_Identity=35.4054054054054, Blast_Score=218, Evalue=1e-56,
Organism=Homo sapiens, GI301171467, Length=366, Percent_Identity=37.1584699453552, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI301171475, Length=357, Percent_Identity=37.8151260504202, Blast_Score=216, Evalue=3e-56,
Organism=Homo sapiens, GI87196351, Length=357, Percent_Identity=37.8151260504202, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI148613856, Length=364, Percent_Identity=37.0879120879121, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI38201710, Length=364, Percent_Identity=37.0879120879121, Blast_Score=216, Evalue=4e-56,
Organism=Homo sapiens, GI50659095, Length=377, Percent_Identity=35.8090185676393, Blast_Score=216, Evalue=5e-56,
Organism=Homo sapiens, GI83700235, Length=371, Percent_Identity=36.1185983827493, Blast_Score=215, Evalue=6e-56,
Organism=Homo sapiens, GI41327773, Length=348, Percent_Identity=35.3448275862069, Blast_Score=213, Evalue=5e-55,
Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=36.0215053763441, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=36.0215053763441, Blast_Score=212, Evalue=6e-55,
Organism=Homo sapiens, GI13129006, Length=370, Percent_Identity=35.9459459459459, Blast_Score=211, Evalue=9e-55,
Organism=Homo sapiens, GI41327771, Length=372, Percent_Identity=35.4838709677419, Blast_Score=211, Evalue=2e-54,
Organism=Homo sapiens, GI256223453, Length=356, Percent_Identity=32.5842696629214, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI21071032, Length=356, Percent_Identity=35.3932584269663, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI188035877, Length=341, Percent_Identity=34.6041055718475, Blast_Score=200, Evalue=3e-51,
Organism=Homo sapiens, GI222352149, Length=347, Percent_Identity=34.8703170028818, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI164419743, Length=372, Percent_Identity=34.1397849462366, Blast_Score=195, Evalue=7e-50,
Organism=Homo sapiens, GI51094101, Length=372, Percent_Identity=34.1397849462366, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI38327634, Length=352, Percent_Identity=33.5227272727273, Blast_Score=189, Evalue=4e-48,
Organism=Homo sapiens, GI55749865, Length=350, Percent_Identity=30.5714285714286, Blast_Score=187, Evalue=2e-47,
Organism=Homo sapiens, GI13514831, Length=358, Percent_Identity=34.3575418994413, Blast_Score=182, Evalue=5e-46,
Organism=Homo sapiens, GI8922886, Length=385, Percent_Identity=32.987012987013, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI41327776, Length=361, Percent_Identity=32.1329639889197, Blast_Score=181, Evalue=9e-46,
Organism=Homo sapiens, GI6005743, Length=385, Percent_Identity=32.7272727272727, Blast_Score=180, Evalue=3e-45,
Organism=Homo sapiens, GI9506931, Length=397, Percent_Identity=31.7380352644836, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI41327779, Length=380, Percent_Identity=31.3157894736842, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI164419732, Length=385, Percent_Identity=31.6883116883117, Blast_Score=176, Evalue=3e-44,
Organism=Homo sapiens, GI62241022, Length=351, Percent_Identity=33.3333333333333, Blast_Score=169, Evalue=4e-42,
Organism=Homo sapiens, GI62241024, Length=331, Percent_Identity=33.5347432024169, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI17505907, Length=404, Percent_Identity=31.4356435643564, Blast_Score=160, Evalue=3e-39,
Organism=Homo sapiens, GI4826686, Length=336, Percent_Identity=30.952380952381, Blast_Score=145, Evalue=9e-35,
Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=28.2420749279539, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=28.2420749279539, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI256773275, Length=406, Percent_Identity=29.3103448275862, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI20336298, Length=219, Percent_Identity=36.5296803652968, Blast_Score=125, Evalue=1e-28,
Organism=Homo sapiens, GI9966805, Length=301, Percent_Identity=33.5548172757475, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI154759257, Length=419, Percent_Identity=27.6849642004773, Blast_Score=114, Evalue=3e-25,
Organism=Escherichia coli, GI1787605, Length=452, Percent_Identity=51.7699115044248, Blast_Score=446, Evalue=1e-126,
Organism=Escherichia coli, GI87082221, Length=339, Percent_Identity=45.4277286135693, Blast_Score=282, Evalue=3e-77,
Organism=Escherichia coli, GI1787016, Length=385, Percent_Identity=39.2207792207792, Blast_Score=253, Evalue=2e-68,
Organism=Escherichia coli, GI1790214, Length=385, Percent_Identity=36.3636363636364, Blast_Score=223, Evalue=3e-59,
Organism=Escherichia coli, GI1788930, Length=350, Percent_Identity=38.2857142857143, Blast_Score=197, Evalue=1e-51,
Organism=Caenorhabditis elegans, GI71987143, Length=370, Percent_Identity=38.1081081081081, Blast_Score=255, Evalue=4e-68,
Organism=Caenorhabditis elegans, GI71995724, Length=344, Percent_Identity=36.9186046511628, Blast_Score=239, Evalue=2e-63,
Organism=Caenorhabditis elegans, GI17507121, Length=344, Percent_Identity=36.9186046511628, Blast_Score=239, Evalue=3e-63,
Organism=Caenorhabditis elegans, GI17552114, Length=353, Percent_Identity=33.1444759206799, Blast_Score=228, Evalue=7e-60,
Organism=Caenorhabditis elegans, GI17510307, Length=378, Percent_Identity=38.3597883597884, Blast_Score=226, Evalue=1e-59,
Organism=Caenorhabditis elegans, GI17510309, Length=378, Percent_Identity=38.3597883597884, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI71995514, Length=378, Percent_Identity=38.3597883597884, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI17552642, Length=372, Percent_Identity=37.3655913978495, Blast_Score=225, Evalue=4e-59,
Organism=Caenorhabditis elegans, GI17555296, Length=360, Percent_Identity=36.1111111111111, Blast_Score=221, Evalue=8e-58,
Organism=Caenorhabditis elegans, GI115533224, Length=334, Percent_Identity=39.2215568862275, Blast_Score=217, Evalue=1e-56,
Organism=Caenorhabditis elegans, GI32565321, Length=379, Percent_Identity=36.6754617414248, Blast_Score=214, Evalue=7e-56,
Organism=Caenorhabditis elegans, GI71982858, Length=353, Percent_Identity=32.0113314447592, Blast_Score=214, Evalue=9e-56,
Organism=Caenorhabditis elegans, GI17510559, Length=377, Percent_Identity=35.5437665782493, Blast_Score=208, Evalue=4e-54,
Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=36.9318181818182, Blast_Score=207, Evalue=1e-53,
Organism=Caenorhabditis elegans, GI71995718, Length=363, Percent_Identity=36.0881542699724, Blast_Score=206, Evalue=3e-53,
Organism=Caenorhabditis elegans, GI17507877, Length=370, Percent_Identity=36.7567567567568, Blast_Score=202, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI71999646, Length=371, Percent_Identity=30.9973045822102, Blast_Score=199, Evalue=2e-51,
Organism=Caenorhabditis elegans, GI71999644, Length=371, Percent_Identity=30.9973045822102, Blast_Score=198, Evalue=6e-51,
Organism=Caenorhabditis elegans, GI17507879, Length=370, Percent_Identity=35.1351351351351, Blast_Score=196, Evalue=3e-50,
Organism=Caenorhabditis elegans, GI193206561, Length=346, Percent_Identity=30.0578034682081, Blast_Score=195, Evalue=4e-50,
Organism=Caenorhabditis elegans, GI17507945, Length=342, Percent_Identity=38.0116959064327, Blast_Score=190, Evalue=1e-48,
Organism=Caenorhabditis elegans, GI17507881, Length=370, Percent_Identity=34.5945945945946, Blast_Score=189, Evalue=3e-48,
Organism=Caenorhabditis elegans, GI115532546, Length=373, Percent_Identity=31.0991957104558, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI115532548, Length=373, Percent_Identity=31.0991957104558, Blast_Score=184, Evalue=7e-47,
Organism=Caenorhabditis elegans, GI17509811, Length=364, Percent_Identity=31.8681318681319, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17536099, Length=371, Percent_Identity=32.8840970350404, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17536101, Length=371, Percent_Identity=32.8840970350404, Blast_Score=182, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI17536103, Length=371, Percent_Identity=33.1536388140162, Blast_Score=182, Evalue=5e-46,
Organism=Caenorhabditis elegans, GI17537549, Length=381, Percent_Identity=33.0708661417323, Blast_Score=181, Evalue=7e-46,
Organism=Caenorhabditis elegans, GI17553716, Length=353, Percent_Identity=31.4447592067989, Blast_Score=178, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI17505370, Length=357, Percent_Identity=32.4929971988796, Blast_Score=172, Evalue=3e-43,
Organism=Caenorhabditis elegans, GI193208216, Length=380, Percent_Identity=31.8421052631579, Blast_Score=156, Evalue=3e-38,
Organism=Caenorhabditis elegans, GI71990816, Length=378, Percent_Identity=30.952380952381, Blast_Score=153, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI71982862, Length=206, Percent_Identity=34.9514563106796, Blast_Score=144, Evalue=8e-35,
Organism=Caenorhabditis elegans, GI25148203, Length=407, Percent_Identity=25.7985257985258, Blast_Score=143, Evalue=2e-34,
Organism=Caenorhabditis elegans, GI17507641, Length=418, Percent_Identity=29.4258373205742, Blast_Score=141, Evalue=9e-34,
Organism=Caenorhabditis elegans, GI17508543, Length=375, Percent_Identity=27.7333333333333, Blast_Score=133, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32564046, Length=401, Percent_Identity=29.1770573566085, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI25148291, Length=397, Percent_Identity=28.463476070529, Blast_Score=122, Evalue=5e-28,
Organism=Caenorhabditis elegans, GI17556951, Length=363, Percent_Identity=26.9972451790634, Blast_Score=119, Evalue=3e-27,
Organism=Caenorhabditis elegans, GI71997889, Length=371, Percent_Identity=28.5714285714286, Blast_Score=112, Evalue=6e-25,
Organism=Caenorhabditis elegans, GI25148205, Length=332, Percent_Identity=25, Blast_Score=108, Evalue=5e-24,
Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=40.2173913043478, Blast_Score=79, Evalue=5e-15,
Organism=Saccharomyces cerevisiae, GI6324217, Length=357, Percent_Identity=38.655462184874, Blast_Score=251, Evalue=3e-67,
Organism=Saccharomyces cerevisiae, GI6320041, Length=353, Percent_Identity=35.4107648725212, Blast_Score=241, Evalue=2e-64,
Organism=Saccharomyces cerevisiae, GI6320224, Length=370, Percent_Identity=32.972972972973, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=37.8453038674033, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6323021, Length=351, Percent_Identity=37.3219373219373, Blast_Score=221, Evalue=3e-58,
Organism=Saccharomyces cerevisiae, GI6325138, Length=377, Percent_Identity=36.3395225464191, Blast_Score=220, Evalue=4e-58,
Organism=Saccharomyces cerevisiae, GI6324778, Length=371, Percent_Identity=36.3881401617251, Blast_Score=218, Evalue=1e-57,
Organism=Saccharomyces cerevisiae, GI6321360, Length=370, Percent_Identity=36.4864864864865, Blast_Score=218, Evalue=2e-57,
Organism=Saccharomyces cerevisiae, GI6322912, Length=367, Percent_Identity=36.2397820163488, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6322323, Length=367, Percent_Identity=36.2397820163488, Blast_Score=216, Evalue=8e-57,
Organism=Saccharomyces cerevisiae, GI6320119, Length=382, Percent_Identity=31.6753926701571, Blast_Score=211, Evalue=3e-55,
Organism=Saccharomyces cerevisiae, GI6324620, Length=369, Percent_Identity=33.6043360433604, Blast_Score=202, Evalue=7e-53,
Organism=Saccharomyces cerevisiae, GI6323947, Length=359, Percent_Identity=32.5905292479109, Blast_Score=186, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6320449, Length=374, Percent_Identity=31.8181818181818, Blast_Score=185, Evalue=1e-47,
Organism=Saccharomyces cerevisiae, GI6321111, Length=372, Percent_Identity=31.989247311828, Blast_Score=183, Evalue=6e-47,
Organism=Saccharomyces cerevisiae, GI6321963, Length=370, Percent_Identity=33.2432432432432, Blast_Score=177, Evalue=3e-45,
Organism=Saccharomyces cerevisiae, GI6322427, Length=359, Percent_Identity=32.8690807799443, Blast_Score=176, Evalue=6e-45,
Organism=Saccharomyces cerevisiae, GI6319714, Length=376, Percent_Identity=29.7872340425532, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6319618, Length=409, Percent_Identity=28.8508557457213, Blast_Score=159, Evalue=8e-40,
Organism=Saccharomyces cerevisiae, GI6320400, Length=382, Percent_Identity=27.7486910994764, Blast_Score=152, Evalue=9e-38,
Organism=Saccharomyces cerevisiae, GI6321267, Length=338, Percent_Identity=30.7692307692308, Blast_Score=150, Evalue=4e-37,
Organism=Saccharomyces cerevisiae, GI6320173, Length=191, Percent_Identity=40.8376963350785, Blast_Score=139, Evalue=9e-34,
Organism=Saccharomyces cerevisiae, GI6323306, Length=421, Percent_Identity=24.9406175771971, Blast_Score=130, Evalue=3e-31,
Organism=Saccharomyces cerevisiae, GI6322876, Length=538, Percent_Identity=26.0223048327138, Blast_Score=123, Evalue=7e-29,
Organism=Saccharomyces cerevisiae, GI6324366, Length=345, Percent_Identity=23.1884057971014, Blast_Score=101, Evalue=3e-22,
Organism=Drosophila melanogaster, GI24645031, Length=344, Percent_Identity=38.0813953488372, Blast_Score=243, Evalue=2e-64,
Organism=Drosophila melanogaster, GI24662330, Length=369, Percent_Identity=39.2953929539295, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI24582080, Length=351, Percent_Identity=38.4615384615385, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24582078, Length=351, Percent_Identity=38.4615384615385, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI17136248, Length=351, Percent_Identity=38.4615384615385, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI24582075, Length=351, Percent_Identity=38.4615384615385, Blast_Score=230, Evalue=2e-60,
Organism=Drosophila melanogaster, GI28574962, Length=353, Percent_Identity=38.5269121813031, Blast_Score=228, Evalue=1e-59,
Organism=Drosophila melanogaster, GI24583279, Length=353, Percent_Identity=32.5779036827195, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24583281, Length=353, Percent_Identity=32.5779036827195, Blast_Score=226, Evalue=3e-59,
Organism=Drosophila melanogaster, GI24584399, Length=349, Percent_Identity=38.6819484240688, Blast_Score=226, Evalue=4e-59,
Organism=Drosophila melanogaster, GI18857967, Length=359, Percent_Identity=36.2116991643454, Blast_Score=222, Evalue=4e-58,
Organism=Drosophila melanogaster, GI24585582, Length=365, Percent_Identity=35.3424657534247, Blast_Score=218, Evalue=8e-57,
Organism=Drosophila melanogaster, GI21355075, Length=400, Percent_Identity=34, Blast_Score=217, Evalue=1e-56,
Organism=Drosophila melanogaster, GI24581954, Length=363, Percent_Identity=32.7823691460055, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24581952, Length=363, Percent_Identity=32.7823691460055, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI24581956, Length=363, Percent_Identity=32.7823691460055, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI28575014, Length=393, Percent_Identity=33.587786259542, Blast_Score=216, Evalue=3e-56,
Organism=Drosophila melanogaster, GI21356161, Length=356, Percent_Identity=37.9213483146067, Blast_Score=213, Evalue=2e-55,
Organism=Drosophila melanogaster, GI24644487, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI45551833, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24644485, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=4e-55,
Organism=Drosophila melanogaster, GI24644483, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI281361218, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644481, Length=378, Percent_Identity=34.9206349206349, Blast_Score=212, Evalue=5e-55,
Organism=Drosophila melanogaster, GI24644479, Length=377, Percent_Identity=34.7480106100796, Blast_Score=211, Evalue=6e-55,
Organism=Drosophila melanogaster, GI24642151, Length=389, Percent_Identity=33.9331619537275, Blast_Score=207, Evalue=2e-53,
Organism=Drosophila melanogaster, GI17977678, Length=369, Percent_Identity=35.230352303523, Blast_Score=203, Evalue=2e-52,
Organism=Drosophila melanogaster, GI17985987, Length=367, Percent_Identity=36.5122615803815, Blast_Score=202, Evalue=3e-52,
Organism=Drosophila melanogaster, GI17136814, Length=357, Percent_Identity=35.5742296918768, Blast_Score=201, Evalue=1e-51,
Organism=Drosophila melanogaster, GI24584994, Length=384, Percent_Identity=33.59375, Blast_Score=199, Evalue=3e-51,
Organism=Drosophila melanogaster, GI281365720, Length=314, Percent_Identity=37.8980891719745, Blast_Score=191, Evalue=1e-48,
Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=31.728045325779, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=31.728045325779, Blast_Score=179, Evalue=4e-45,
Organism=Drosophila melanogaster, GI17647335, Length=352, Percent_Identity=30.6818181818182, Blast_Score=169, Evalue=4e-42,
Organism=Drosophila melanogaster, GI24642822, Length=371, Percent_Identity=30.4582210242588, Blast_Score=160, Evalue=2e-39,
Organism=Drosophila melanogaster, GI24668515, Length=332, Percent_Identity=33.433734939759, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24666101, Length=370, Percent_Identity=32.4324324324324, Blast_Score=156, Evalue=2e-38,
Organism=Drosophila melanogaster, GI21355559, Length=364, Percent_Identity=31.8681318681319, Blast_Score=145, Evalue=8e-35,
Organism=Drosophila melanogaster, GI24643725, Length=392, Percent_Identity=27.5510204081633, Blast_Score=135, Evalue=9e-32,
Organism=Drosophila melanogaster, GI19920478, Length=377, Percent_Identity=29.4429708222812, Blast_Score=123, Evalue=2e-28,
Organism=Drosophila melanogaster, GI18859659, Length=231, Percent_Identity=32.9004329004329, Blast_Score=121, Evalue=9e-28,
Organism=Drosophila melanogaster, GI28571338, Length=231, Percent_Identity=32.9004329004329, Blast_Score=121, Evalue=1e-27,
Organism=Drosophila melanogaster, GI17136666, Length=445, Percent_Identity=25.8426966292135, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI20130173, Length=306, Percent_Identity=28.1045751633987, Blast_Score=103, Evalue=4e-22,
Organism=Drosophila melanogaster, GI24640164, Length=360, Percent_Identity=23.0555555555556, Blast_Score=97, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005580
- InterPro:   IPR014001
- InterPro:   IPR011545
- InterPro:   IPR001650
- InterPro:   IPR014021
- InterPro:   IPR000629
- InterPro:   IPR014014 [H]

Pfam domain/function: PF03880 DbpA; PF00270 DEAD; PF00271 Helicase_C [H]

EC number: =3.6.4.13 [H]

Molecular weight: Translated: 51394; Mature: 51394

Theoretical pI: Translated: 8.16; Mature: 8.16

Prosite motif: PS00039 DEAD_ATP_HELICASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQPSPPSPAPRAAAASAGFDALGLSPEVLANLRQLGYERMTPIQAASLPPALLGRDLIAQ
CCCCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCHHHCCCCHHHCCCHHHHHHHHHHC
ASTGSGKTAAFGLALLERLNPRRFAVQALVLCPTRELADQVAAEIRRLARAQENIKVVTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
CGGVPLRGQAASLEHGAHVVVGTPGRVMDHLERGTLDLGALATFVLDEADRMLDMGFSED
ECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
IAQVARRCPDTRQTLLFSATYPEGIERIARQFMKDPQRIVVQAQHAEGKIGQRWYEVQER
HHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHH
ERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLVQ
HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
FANRSCSVLVATDVAARGIDIAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLAS
HHCCCCEEEEEECHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHC
LPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMATIQIIGGRKEKIRAGDVLGAL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
TGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGEG
HCCCCCCHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC
>Mature Secondary Structure
MQPSPPSPAPRAAAASAGFDALGLSPEVLANLRQLGYERMTPIQAASLPPALLGRDLIAQ
CCCCCCCCCCCHHHHHCCCHHCCCCHHHHHHHHHHCHHHCCCCHHHCCCHHHHHHHHHHC
ASTGSGKTAAFGLALLERLNPRRFAVQALVLCPTRELADQVAAEIRRLARAQENIKVVTL
CCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCEEEEE
CGGVPLRGQAASLEHGAHVVVGTPGRVMDHLERGTLDLGALATFVLDEADRMLDMGFSED
ECCCCCCCCCCCCCCCCEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHH
IAQVARRCPDTRQTLLFSATYPEGIERIARQFMKDPQRIVVQAQHAEGKIGQRWYEVQER
HHHHHHHCCCCHHEEEEECCCHHHHHHHHHHHHCCCHHEEEEECCCCCCHHHHHHHHHHH
ERLHAVSQLLNHFRPESAIAFCNTKQQCRDLVEVLRAQGFSALALHGDLEQRDRDQVLVQ
HHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHH
FANRSCSVLVATDVAARGIDIAGLQAVINVDVAPDPEVHIHRIGRTGRADAEGLALSLAS
HHCCCCEEEEEECHHHCCCCCCCEEEEEEECCCCCCCEEEEECCCCCCCCCCHHHHHHHC
LPEMGQVGRIEVLQGRPSEWHPLSGLTPAPGGPLQPPMATIQIIGGRKEKIRAGDVLGAL
CCCCCCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH
TGEMGFTREQVGKINVNDFSTYVAVERSVARQAAQRLSSGRVKGRSVKARLVEDGEG
HCCCCCCHHHHCEECCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2216714; 8253085; 9097039; 9278503; 9016593; 11350034 [H]