Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is nreC [H]

Identifier: 120612865

GI number: 120612865

Start: 4685994

End: 4686653

Strand: Reverse

Name: nreC [H]

Synonym: Aave_4229

Alternate gene names: 120612865

Gene position: 4686653-4685994 (Counterclockwise)

Preceding gene: 120612866

Following gene: 120612864

Centisome position: 87.56

GC content: 73.64

Gene sequence:

>660_bases
ATGACCGCTGCTGCCATCGCTCCGCTGGAGCGCCCCGTCCGCCTGTTCCTCGTCGATGACCATGCCCTGGTGCGCGACGG
CCTGCGCGCGCGCCTGGGCAGCCTCCCCTGGGTGGCGATCGTGGGCGAGGCCTCGGGCGCGGAAGAGGCCGGACCGCTGA
TCGCGCGGCTGGCGCCCGGCATCGTCCTCATGGACGTGGGCATGAAGGACGTGAGCGGGCTGGACTTCGCCGCCCGCCTG
CTGGCCGGCGACGGCGCCCCGCGGGTGCTCATGCTCAGCATGTACGACAACCCCGAGTACGTGCAGCGCGCCCTGCAGGT
GGGCGCCAGCGGGTACGTGCTCAAGGACGCGCCGGCGTCCGAGCTGGTCGCGGCGCTGGAGGCGGTGGCCGCGGGAGGCA
CCTTCCTCAGCCCGGCCGTGTCGCAGCGGCTCTTCCGCAACCAGGCCCCCAAGCCGCTGCTCACCCCGCGCGAGAGCGAG
ATCCTGGCGGCGCTGGGCCGGGGCGCCTCCAGCAAGCAGATCGCCTGCGATCTCGGCCTGAGCGTGCGCACGGTGGAGGC
GCACCGGCAGAACATCCGCCGGCGGCTGGAGCTGGGCAGCCTGGCGGAGCTGATCCGCTATGCCGTCGAGCACGCCAAGC
GCTTCGACACGGGCCGCTGA

Upstream 100 bases:

>100_bases
ACGAGCGCATGGCGGCCATCGGCGGCCGGCTGCAGGTGCGTTCGGGCGCGGGCGGCACGCGCGTGGTGGCCGAGGTGCCC
GCGGATAGGATGGAGCCCGC

Downstream 100 bases:

>100_bases
CGCCCGGGGCCTGTCGACAGTCCCTAGGGTTGTCCCTTACGAAATTCCACCCGGCCCGCCTACGTGGCCGGGCGGATGCG
CGCGGCGCCCCTGGCCGGGA

Product: two component LuxR family transcriptional regulator

Products: NA

Alternate protein names: Nitrogen regulation protein C [H]

Number of amino acids: Translated: 219; Mature: 218

Protein sequence:

>219_residues
MTAAAIAPLERPVRLFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPGIVLMDVGMKDVSGLDFAARL
LAGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPASELVAALEAVAAGGTFLSPAVSQRLFRNQAPKPLLTPRESE
ILAALGRGASSKQIACDLGLSVRTVEAHRQNIRRRLELGSLAELIRYAVEHAKRFDTGR

Sequences:

>Translated_219_residues
MTAAAIAPLERPVRLFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPGIVLMDVGMKDVSGLDFAARL
LAGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPASELVAALEAVAAGGTFLSPAVSQRLFRNQAPKPLLTPRESE
ILAALGRGASSKQIACDLGLSVRTVEAHRQNIRRRLELGSLAELIRYAVEHAKRFDTGR
>Mature_218_residues
TAAAIAPLERPVRLFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPGIVLMDVGMKDVSGLDFAARLL
AGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPASELVAALEAVAAGGTFLSPAVSQRLFRNQAPKPLLTPRESEI
LAALGRGASSKQIACDLGLSVRTVEAHRQNIRRRLELGSLAELIRYAVEHAKRFDTGR

Specific function: Member of the two-component regulatory system nreB/nreC involved in the control of dissimilatory nitrate/nitrite reduction in response to oxygen. Phosphorylated nreC binds to a GC-rich palindromic sequence at the promoters of the nitrate (narGHJI) and nit

COG id: COG2197

COG function: function code TK; Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1790102, Length=195, Percent_Identity=35.3846153846154, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1788222, Length=206, Percent_Identity=28.6407766990291, Blast_Score=102, Evalue=1e-23,
Organism=Escherichia coli, GI1788521, Length=199, Percent_Identity=34.6733668341709, Blast_Score=102, Evalue=2e-23,
Organism=Escherichia coli, GI1786747, Length=203, Percent_Identity=29.5566502463054, Blast_Score=91, Evalue=4e-20,
Organism=Escherichia coli, GI1787473, Length=187, Percent_Identity=33.6898395721925, Blast_Score=88, Evalue=4e-19,
Organism=Escherichia coli, GI1788546, Length=201, Percent_Identity=25.3731343283582, Blast_Score=70, Evalue=8e-14,
Organism=Escherichia coli, GI1788712, Length=195, Percent_Identity=23.5897435897436, Blast_Score=61, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR016032
- InterPro:   IPR001789
- InterPro:   IPR000792
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00196 GerE; PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 23312; Mature: 23181

Theoretical pI: Translated: 9.09; Mature: 9.09

Prosite motif: PS50110 RESPONSE_REGULATORY ; PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTAAAIAPLERPVRLFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPG
CCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCC
IVLMDVGMKDVSGLDFAARLLAGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPAS
EEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHH
ELVAALEAVAAGGTFLSPAVSQRLFRNQAPKPLLTPRESEILAALGRGASSKQIACDLGL
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCC
SVRTVEAHRQNIRRRLELGSLAELIRYAVEHAKRFDTGR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TAAAIAPLERPVRLFLVDDHALVRDGLRARLGSLPWVAIVGEASGAEEAGPLIARLAPG
CCCCCCCCCCCEEEEEECCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHCCC
IVLMDVGMKDVSGLDFAARLLAGDGAPRVLMLSMYDNPEYVQRALQVGASGYVLKDAPAS
EEEEECCCCCCCCHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCCCCEEECCCCHH
ELVAALEAVAAGGTFLSPAVSQRLFRNQAPKPLLTPRESEILAALGRGASSKQIACDLGL
HHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCC
SVRTVEAHRQNIRRRLELGSLAELIRYAVEHAKRFDTGR
EEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12426351 [H]