Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is gltI [H]
Identifier: 120612858
GI number: 120612858
Start: 4679618
End: 4680529
Strand: Reverse
Name: gltI [H]
Synonym: Aave_4222
Alternate gene names: 120612858
Gene position: 4680529-4679618 (Counterclockwise)
Preceding gene: 120612859
Following gene: 120612849
Centisome position: 87.44
GC content: 66.23
Gene sequence:
>912_bases ATGATCCGTCGCTCTTTCCGGCTGCTGGCGCTCGCCGCGGCCTTTTCCGCCCTTTCCGCTCCCGTCCTGGCCCAGGCGCC TGCCGACACGATGGCCCGCATCCAGCAGACCCGCACCATCACCCTGGGGGTGCGCGAATCGGCCTGGCCCTTCTCGTTCG TGGACGCCCAGAACGGCGGCAAGGCGGCCGGCTATTCGGTGGACCTGTGCCAGGCGGTGGTCGAGGAAATCAAGAACACG CTCAAGCTCAAGGACCTGGAGGTCAAGTACCGCACGGTGAGCGCCGCCGAGCGCATCCCGAAGCTGGAAGCGGGGGAGAT CGACCTGGAGTGCGGCTCCACCACCAACACCAAGGCGCGGCAGGAGCGGGTGGCCTTCGGTCCCACCATGTTCGTGGCGG GTATCCGCGTGCTCGTGCCCAAGGGCACCAAGGCCGACACGGTGCAGAACCTCGCCGGCATGACGGTGGCCGTGAGCAAG GGCTCCACCTCCGAGAAGCTGCTCACCCAGCTCACGGCGAACGAGGTGAAGGCCAAGGTCAAGGTCTTCGACAACAACGA CGAAGCGTTCAAGGCCCTGCGCGCCGGGACGGTGAAGGCGTTCGCCCAGGATGACTCGCTGCTGCTCGGCCTGGTGGCCC GCAACAAGGCGCAGGACGCCCTGGCGCTCGGCCACTTCGTGCTGTCCGTGGAGCCCTACGCCATCATGGTGCGCAAGAAC GACACCGCGCTCATGACCGTGGTGGACCGCACGCTCGGCAAGCTCTACACCAGCCGCGAGATCGATCCCATCTACAAGAA GTGGTTCCTGAACAACCAGATCGCCATCCCGGTGGGCCGGCTGACGCGCGATAGCTTCAGCCGTCCCAACAAGGAGGCGG GTGTGGCGATGATGCTCGGCTACTCGCTGTAG
Upstream 100 bases:
>100_bases TCACATGCACGGCGTTTTCCCCTGGCACAGTGATTGCCTGGCTTTGGCTCCACCACCCCTTCCTCTTACTTTTCCTTCCT TCTCGATCCGGTCCTCTCCC
Downstream 100 bases:
>100_bases ACGCGGGCTGCGAAGGCGGCAATGTTGTCCAGGAGGCTGTCGAAGTCCTCCGCGGCAAGGCAGGGGTTCAGCAGAGTCAG CTTCAGCGCAGCGCGCTGCT
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 303; Mature: 303
Protein sequence:
>303_residues MIRRSFRLLALAAAFSALSAPVLAQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNT LKLKDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKARQERVAFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSK GSTSEKLLTQLTANEVKAKVKVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKN DTALMTVVDRTLGKLYTSREIDPIYKKWFLNNQIAIPVGRLTRDSFSRPNKEAGVAMMLGYSL
Sequences:
>Translated_303_residues MIRRSFRLLALAAAFSALSAPVLAQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNT LKLKDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKARQERVAFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSK GSTSEKLLTQLTANEVKAKVKVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKN DTALMTVVDRTLGKLYTSREIDPIYKKWFLNNQIAIPVGRLTRDSFSRPNKEAGVAMMLGYSL >Mature_303_residues MIRRSFRLLALAAAFSALSAPVLAQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGGKAAGYSVDLCQAVVEEIKNT LKLKDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKARQERVAFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSK GSTSEKLLTQLTANEVKAKVKVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKN DTALMTVVDRTLGKLYTSREIDPIYKKWFLNNQIAIPVGRLTRDSFSRPNKEAGVAMMLGYSL
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=244, Percent_Identity=38.5245901639344, Blast_Score=161, Evalue=5e-41, Organism=Escherichia coli, GI1788228, Length=257, Percent_Identity=23.7354085603113, Blast_Score=71, Evalue=9e-14, Organism=Escherichia coli, GI1788649, Length=243, Percent_Identity=26.7489711934156, Blast_Score=68, Evalue=7e-13, Organism=Escherichia coli, GI1787031, Length=221, Percent_Identity=27.1493212669683, Blast_Score=65, Evalue=5e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 32960; Mature: 32960
Theoretical pI: Translated: 10.22; Mature: 10.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRRSFRLLALAAAFSALSAPVLAQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGG CCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCEEEEEEECCCCCCEEEEECCCCC KAAGYSVDLCQAVVEEIKNTLKLKDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKAR CCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEHHHHHHCCCCCCCEEEEECCCCCCCHHH QERVAFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSKGSTSEKLLTQLTANEVKAKV HHHHHCCCHHHHCCEEEEECCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHEEEE KVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKN EEEECCHHHHHHHHHCCCEEECCCCCEEEEEHHCCCHHHHHHHHHHEEEECCEEEEEECC DTALMTVVDRTLGKLYTSREIDPIYKKWFLNNQIAIPVGRLTRDSFSRPNKEAGVAMMLG CCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCCEEEEEE YSL CCC >Mature Secondary Structure MIRRSFRLLALAAAFSALSAPVLAQAPADTMARIQQTRTITLGVRESAWPFSFVDAQNGG CCCCHHHHHHHHHHHHHHCCCHHHCCCHHHHHHHHHCEEEEEEECCCCCCEEEEECCCCC KAAGYSVDLCQAVVEEIKNTLKLKDLEVKYRTVSAAERIPKLEAGEIDLECGSTTNTKAR CCCCCHHHHHHHHHHHHHHHHEEEEEEEEEEEHHHHHHCCCCCCCEEEEECCCCCCCHHH QERVAFGPTMFVAGIRVLVPKGTKADTVQNLAGMTVAVSKGSTSEKLLTQLTANEVKAKV HHHHHCCCHHHHCCEEEEECCCCCHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHHEEEE KVFDNNDEAFKALRAGTVKAFAQDDSLLLGLVARNKAQDALALGHFVLSVEPYAIMVRKN EEEECCHHHHHHHHHCCCEEECCCCCEEEEEHHCCCHHHHHHHHHHEEEECCEEEEEECC DTALMTVVDRTLGKLYTSREIDPIYKKWFLNNQIAIPVGRLTRDSFSRPNKEAGVAMMLG CCEEHHHHHHHHHHHHHCCCCCHHHHHHHCCCEEEEEECCCCHHHCCCCCCCCCEEEEEE YSL CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]