Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is lifO [H]
Identifier: 120612826
GI number: 120612826
Start: 4641626
End: 4642648
Strand: Direct
Name: lifO [H]
Synonym: Aave_4190
Alternate gene names: 120612826
Gene position: 4641626-4642648 (Clockwise)
Preceding gene: 120612825
Following gene: 120612827
Centisome position: 86.71
GC content: 76.05
Gene sequence:
>1023_bases ATGGCGGCGGCACGCGGGCGCATGGCTGCTGCGCTGCTGGCGGCCGCGGCGCTGGGCCTGGCCGGCTGGTGGGCGCAGCG CGCTACGGCGTACGGAGCCGGAGAGGCGGGGGCACGCCCTGCAACCCGCCTGGCGGCGGACGCCTCCGCATCCGCGCGCC GGCCGTCCGGCGGGCCCGATCCGCGGTTCCTGGCCTCCCGCTCCACGGCAGAGCTGGAGGCGCTCCAGACCGACCCGCTG CTGGGCGCAGGGTTGCGCGACACGCTGGAAACCCTGCTGCAGGAAGCCCTGGACGCCGGGCCGACCACCGACGCGGCCAC GCTCAAGCGCCGGCTGGAGGGCCTGGTGGACCGCCATTTCCCGGCGGCGGTGCGTGCGCGTGCCCTGGCGCTGGCCGGCC GCTACGTGGATTACCGCGCGGCGCTCGGCACGGTGACGCCACCTGCGGACCTGTCCGACCCGAAGGCGCTGCGGGCCTCC ATGGAGGAGCGCGACCGGCTGCGCGAGCGTTTCTTCGAGCCTGGCGAAGCGGCCGCCTTGTTCGGGGGCGAAGCAGTGCT GGACCGCCACACGCTCGCGCGGCTGGAGATCCTGCAGGACACCGGCCGCTCTCCGCAGGAGAAGGCCCGGGCGCTCCAAG CCGCCGAGGATGCGCTGCCCGCCGACCTGCGCGCCGCCCGCCAGGCCTACGCCACGCCGCAGGCGGTGGCGGAGCAGACG GCGGCGCTCGATGCCCGCCAGGCCGACGACGCGACGCGCCATGCGGAGCGCAGCGCCCGTTACGGAGCGGCGGCCGCCGA CGCCCTGGCGCGCCTGGACGGCGAGGAGCGGCAGTGGCAGCAGCGGCTGGACCAGTACCAGCAGGCGCGGGCCGCACAGG GCGACGGTCCGGCGCTGCAGAAGCTGCGCGAGCAGTTGTTCACGCCCGAGGAGCGACTGCGCGTGGAAGGGCGCTGGCGC TGCGATCCACGCGCCCCGGTACAGCGAGCGGGAGCTGAGGCCGGCTCCATGGCCATGAAATGA
Upstream 100 bases:
>100_bases AATCAACCAGATGGTGGGGCTGCGGCACCTGTTCTCTCCCGACCCGGTGACGCTCTACCGCCAGCACGCCAACCGGCTGA AGCAGCAGGGGCTCTGAGCG
Downstream 100 bases:
>100_bases CCGCCAGGCGGACACCAGGCGGCCGCCGGCTGCGCCGCCTGGCCCCTTGACGCAGTTTTCCTGCACAGGCCCGGCAACGT TGCGATGTTTATGCCAGAAA
Product: lipase chaperone-like protein
Products: NA
Alternate protein names: Lipase activator protein; Lipase foldase; Lipase helper protein; Lipase modulator [H]
Number of amino acids: Translated: 340; Mature: 339
Protein sequence:
>340_residues MAAARGRMAAALLAAAALGLAGWWAQRATAYGAGEAGARPATRLAADASASARRPSGGPDPRFLASRSTAELEALQTDPL LGAGLRDTLETLLQEALDAGPTTDAATLKRRLEGLVDRHFPAAVRARALALAGRYVDYRAALGTVTPPADLSDPKALRAS MEERDRLRERFFEPGEAAALFGGEAVLDRHTLARLEILQDTGRSPQEKARALQAAEDALPADLRAARQAYATPQAVAEQT AALDARQADDATRHAERSARYGAAAADALARLDGEERQWQQRLDQYQQARAAQGDGPALQKLREQLFTPEERLRVEGRWR CDPRAPVQRAGAEAGSMAMK
Sequences:
>Translated_340_residues MAAARGRMAAALLAAAALGLAGWWAQRATAYGAGEAGARPATRLAADASASARRPSGGPDPRFLASRSTAELEALQTDPL LGAGLRDTLETLLQEALDAGPTTDAATLKRRLEGLVDRHFPAAVRARALALAGRYVDYRAALGTVTPPADLSDPKALRAS MEERDRLRERFFEPGEAAALFGGEAVLDRHTLARLEILQDTGRSPQEKARALQAAEDALPADLRAARQAYATPQAVAEQT AALDARQADDATRHAERSARYGAAAADALARLDGEERQWQQRLDQYQQARAAQGDGPALQKLREQLFTPEERLRVEGRWR CDPRAPVQRAGAEAGSMAMK >Mature_339_residues AAARGRMAAALLAAAALGLAGWWAQRATAYGAGEAGARPATRLAADASASARRPSGGPDPRFLASRSTAELEALQTDPLL GAGLRDTLETLLQEALDAGPTTDAATLKRRLEGLVDRHFPAAVRARALALAGRYVDYRAALGTVTPPADLSDPKALRASM EERDRLRERFFEPGEAAALFGGEAVLDRHTLARLEILQDTGRSPQEKARALQAAEDALPADLRAARQAYATPQAVAEQTA ALDARQADDATRHAERSARYGAAAADALARLDGEERQWQQRLDQYQQARAAQGDGPALQKLREQLFTPEERLRVEGRWRC DPRAPVQRAGAEAGSMAMK
Specific function: May be involved in the folding of the extracellular lipase during its passage through the periplasm [H]
COG id: COG5380
COG function: function code O; Lipase chaperone
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lipase chaperone family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004961 [H]
Pfam domain/function: PF03280 Lipase_chap [H]
EC number: NA
Molecular weight: Translated: 36415; Mature: 36284
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAARGRMAAALLAAAALGLAGWWAQRATAYGAGEAGARPATRLAADASASARRPSGGPD CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC PRFLASRSTAELEALQTDPLLGAGLRDTLETLLQEALDAGPTTDAATLKRRLEGLVDRHF CCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PAAVRARALALAGRYVDYRAALGTVTPPADLSDPKALRASMEERDRLRERFFEPGEAAAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH FGGEAVLDRHTLARLEILQDTGRSPQEKARALQAAEDALPADLRAARQAYATPQAVAEQT HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH AALDARQADDATRHAERSARYGAAAADALARLDGEERQWQQRLDQYQQARAAQGDGPALQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH KLREQLFTPEERLRVEGRWRCDPRAPVQRAGAEAGSMAMK HHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC >Mature Secondary Structure AAARGRMAAALLAAAALGLAGWWAQRATAYGAGEAGARPATRLAADASASARRPSGGPD CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCCCCCCCCCCC PRFLASRSTAELEALQTDPLLGAGLRDTLETLLQEALDAGPTTDAATLKRRLEGLVDRHF CCHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC PAAVRARALALAGRYVDYRAALGTVTPPADLSDPKALRASMEERDRLRERFFEPGEAAAL HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHH FGGEAVLDRHTLARLEILQDTGRSPQEKARALQAAEDALPADLRAARQAYATPQAVAEQT HCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHHHH AALDARQADDATRHAERSARYGAAAADALARLDGEERQWQQRLDQYQQARAAQGDGPALQ HHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCHHHH KLREQLFTPEERLRVEGRWRCDPRAPVQRAGAEAGSMAMK HHHHHHCCCHHHHCCCCCCCCCCCCHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7768830 [H]