Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612813
Identifier: 120612813
GI number: 120612813
Start: 4626883
End: 4627539
Strand: Reverse
Name: 120612813
Synonym: Aave_4176
Alternate gene names: NA
Gene position: 4627539-4626883 (Counterclockwise)
Preceding gene: 120612814
Following gene: 120612812
Centisome position: 86.45
GC content: 77.63
Gene sequence:
>657_bases ATGGTCGAGCCAGCCATGCCCGTGCGCGGCGCTGCCGATGGCGCGACCCGCACCGCGTGGCTGCTGTTCACGCCGCCCGC GGCGCTCGTCGGGCTGCGCTGGCTGCTGCAATGGCACGACGACCGCTGGCCCGGGCCGGTCGTCTGGGCGCTGGCGCCAT TCGACGGCACGCGGGAGCCCGGCGCAGGCCTGGCCTTTCTCGGCATGGGGGCCGCGGCCGTGGCCGTCGCCGGGGTGCTG CTGCGCTGGGCTGCGCGCCGATGGGGCCGGCCCGCCGCCCGGAACGCCGCCCTCGGTGCGTGGGTGCTGGCCTGCGCCGG AGGCGCCATGGCCCTGGCGCTGAGGCACTGGGACGCCAGGCTGCTGAAGCCCCTGCCGGATGCCGGCGTGGTCGTGGCGG GCAGCCGGCCGCAGCCGGCCAGCCTGCGCGGACCGGGCGGAACGCAGGTCGTGCTGCGCTGGCAGCCGGAGACCGGCGGC GATGCGGCCCCCCTGCTGAGGCAGGCCACCTTGCCCGATGACCCCGCCGCTGCCTGGAAACCGGGGCAGGTGGTGCGTCT GCGGTGGGCACGAGGGCGGTTCGGCGGCCTCTACGTCACCGGCTGGGACGCGCCGCCGACCGGCGGCACAGCGCCCGGCG GGCCGCATCTTCCATAA
Upstream 100 bases:
>100_bases ACTGGACCTGCGCCTGAACCGCCAGGGCCTGCTGCAGAGCCTGCACGTGGCGATGAACCGCGTGGCCGATCTCTCCCGCC TGGCCGTGGCCTGAGCCTGC
Downstream 100 bases:
>100_bases TCGCGCGCATGAAACTCGCCATTCTCGACCGCGACGGCACGCTCAATGCGTCCGGCGAGGAATTCATCTCCATGCCAGAG GAATGGGTGCCCATGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MVEPAMPVRGAADGATRTAWLLFTPPAALVGLRWLLQWHDDRWPGPVVWALAPFDGTREPGAGLAFLGMGAAAVAVAGVL LRWAARRWGRPAARNAALGAWVLACAGGAMALALRHWDARLLKPLPDAGVVVAGSRPQPASLRGPGGTQVVLRWQPETGG DAAPLLRQATLPDDPAAAWKPGQVVRLRWARGRFGGLYVTGWDAPPTGGTAPGGPHLP
Sequences:
>Translated_218_residues MVEPAMPVRGAADGATRTAWLLFTPPAALVGLRWLLQWHDDRWPGPVVWALAPFDGTREPGAGLAFLGMGAAAVAVAGVL LRWAARRWGRPAARNAALGAWVLACAGGAMALALRHWDARLLKPLPDAGVVVAGSRPQPASLRGPGGTQVVLRWQPETGG DAAPLLRQATLPDDPAAAWKPGQVVRLRWARGRFGGLYVTGWDAPPTGGTAPGGPHLP >Mature_218_residues MVEPAMPVRGAADGATRTAWLLFTPPAALVGLRWLLQWHDDRWPGPVVWALAPFDGTREPGAGLAFLGMGAAAVAVAGVL LRWAARRWGRPAARNAALGAWVLACAGGAMALALRHWDARLLKPLPDAGVVVAGSRPQPASLRGPGGTQVVLRWQPETGG DAAPLLRQATLPDDPAAAWKPGQVVRLRWARGRFGGLYVTGWDAPPTGGTAPGGPHLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22801; Mature: 22801
Theoretical pI: Translated: 11.92; Mature: 11.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVEPAMPVRGAADGATRTAWLLFTPPAALVGLRWLLQWHDDRWPGPVVWALAPFDGTREP CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC GAGLAFLGMGAAAVAVAGVLLRWAARRWGRPAARNAALGAWVLACAGGAMALALRHWDAR CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHEEHHHHHHHH LLKPLPDAGVVVAGSRPQPASLRGPGGTQVVLRWQPETGGDAAPLLRQATLPDDPAAAWK HHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCC PGQVVRLRWARGRFGGLYVTGWDAPPTGGTAPGGPHLP CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVEPAMPVRGAADGATRTAWLLFTPPAALVGLRWLLQWHDDRWPGPVVWALAPFDGTREP CCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCC GAGLAFLGMGAAAVAVAGVLLRWAARRWGRPAARNAALGAWVLACAGGAMALALRHWDAR CCCEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHEEHHHHHHHH LLKPLPDAGVVVAGSRPQPASLRGPGGTQVVLRWQPETGGDAAPLLRQATLPDDPAAAWK HHCCCCCCCEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCC PGQVVRLRWARGRFGGLYVTGWDAPPTGGTAPGGPHLP CCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA