Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

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The map label for this gene is 120612798

Identifier: 120612798

GI number: 120612798

Start: 4614696

End: 4616195

Strand: Direct

Name: 120612798

Synonym: Aave_4161

Alternate gene names: NA

Gene position: 4614696-4616195 (Clockwise)

Preceding gene: 120612779

Following gene: 120612799

Centisome position: 86.21

GC content: 69.13

Gene sequence:

>1500_bases
ATGCAGTCTTCCCCCCGCCACCCCCGATCGATCCTGCCGCGCGCCGCGATGGCCGTATCCGCCGCCGCCGTGCTTCTGGC
GGGTGCCGCGGGCGTCCATCTTCTGCACCGGCTGGCACCCGCGCCGCACTCCCCGCATGGAGAGCGCATGCTGCTGGCGC
CGATGATCGGCGTGCTGGAACCCTGCATCTGGGGCCAGCCCGCCCTGCCCGGTGCGTTGGCCGGCATGCAGGAGCAGTGC
CGCGGCGCCCAGGGTTCGGCGGCTGCGCTGGTGGAATCCACTTTGCGGACGTTGCAGCCCGAGCCGCATGCGGCCGCCTC
CGTTGACCTGGGCTACACGCTGCCGGTACCTTTGCTCAAGCTGTTCGAGCGGACGCAGGACGGCGGCTGGCGGATCGACC
AGGCGATCGTGGACCGCCTGGTGCGGACCCTCCGGGACACCCCGCGCCCGGCCATCCTGTACCTGTTCTCGACGCACTTT
TCATCCGAGGCCCCCATCGAGCCGGTCCTGGCGGCCGATCCATCGAACATGGGATGGACGCGCGACGGCCCGCTGGGCAT
GGACGACTACTACGATTCGAAGGTCTTCAACTGGTCCTTCGCCACCACGCGCAATGCACTGACCGAGCGCAGGGCCGAAG
CGGTCCGGGCCGTGGTGGACGCGGCATGCCGGCTTCCCGGGAAAGACCGCGCGAAGATCCGCGGCATCACGCTCCTGGGC
GAGCTGCACCATTTGTTTCCGAATTTTCAGGCCGGGATGGGATTCGGCGGCACCTACCGAATCACCGATTACAGCCCGGC
ATCCGTCGAGGGCTTCCGCGGCTACCTGCGCGCGGAATTCCGGGACATCGCGCAGTTCAACCGCGCGGTCGGCGCCGACT
ATGCCTCGTTCGACGAGGTGGCTCCCCCGTCGCGCGACATCCGGTCGGAGCCCCTGCGCCGCTTCACGGAGCACATCGAT
GGATTCGCCCAGGGCACGCTGCCGGTGGCCGGCTGGGCCTACGTGCCGGGCAGCACGCCGGAGCGTCCTGCCCGCGTGCA
TGTGTACCGCAATGGCGAACGGGTGGGACAGACCACCGTGCACTGGGGACGGCAGGACGTGCTCGCGGCCAAGCCGGAAT
TCGGCGACGCGAACACCGGCTGGCGCCTGGACCTGGATTTCAGGCGGCTCCCGCCCGGCATGCACCGGCTGGACATTTTC
CTGGAAGCCCGACCCGGCCAGCTGACGCACCTGGGAACGCGCGACATCGCCATCATGGACCGCTCGCAGTCCACTCCGCA
GCCGATGCCGCAGCGCGCACTTCCAGCCGCGGTCCCGCCACCGGATGCCCGGGTGCAGGCGCACATCGACTTTCCCGCGC
AGGCATCGTCGTATTACTACAACCCGCTGGTCCCGCTGTGGCATGCATTCCGCGCCCGCCAGGTCGTGGACTACCTGCGG
TACTTCGACGGCCTCTTGGAGCGGTCCTGCCTTTCCGGCGTGCCGCGCTATACCCACTAG

Upstream 100 bases:

>100_bases
GGGATCGAAGCCCTCAAGTGTAGCCGGCCAGGTTGCGTCGCCCGCATGGACCTTGCCGCTTGGCTTACAGTCGCAAGCCA
CCCGCCCACCCCGCCAACGC

Downstream 100 bases:

>100_bases
ATCATCCCGTTCACCAATCCCGGCTGGGATGCGAACAAGTTCGCGATCCAGGACTCGCTGCGTCCTGCACAGACCGGCAT
CCGGCTGGGCGTGAGCCTGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC
RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF
SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG
ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID
GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF
LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR
YFDGLLERSCLSGVPRYTH

Sequences:

>Translated_499_residues
MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC
RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF
SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG
ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID
GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF
LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR
YFDGLLERSCLSGVPRYTH
>Mature_499_residues
MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC
RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF
SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG
ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID
GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF
LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR
YFDGLLERSCLSGVPRYTH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 55132; Mature: 55132

Theoretical pI: Translated: 8.80; Mature: 8.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH
PCIWGQPALPGALAGMQEQCRGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLK
HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHH
LFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHFSSEAPIEPVLAADPSNMGWT
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCC
RDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG
CCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH
ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEV
HHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
APPSRDIRSEPLRRFTEHIDGFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTV
CCCCCHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHCCHHH
HWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIFLEARPGQLTHLGTRDIAIMD
HCCCHHHEECCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCEEECCCCCEEEEE
RSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR
CCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YFDGLLERSCLSGVPRYTH
HHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLE
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH
PCIWGQPALPGALAGMQEQCRGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLK
HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHH
LFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHFSSEAPIEPVLAADPSNMGWT
HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCC
RDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG
CCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH
ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEV
HHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC
APPSRDIRSEPLRRFTEHIDGFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTV
CCCCCHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHCCHHH
HWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIFLEARPGQLTHLGTRDIAIMD
HCCCHHHEECCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCEEECCCCCEEEEE
RSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR
CCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YFDGLLERSCLSGVPRYTH
HHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA