Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612798
Identifier: 120612798
GI number: 120612798
Start: 4614696
End: 4616195
Strand: Direct
Name: 120612798
Synonym: Aave_4161
Alternate gene names: NA
Gene position: 4614696-4616195 (Clockwise)
Preceding gene: 120612779
Following gene: 120612799
Centisome position: 86.21
GC content: 69.13
Gene sequence:
>1500_bases ATGCAGTCTTCCCCCCGCCACCCCCGATCGATCCTGCCGCGCGCCGCGATGGCCGTATCCGCCGCCGCCGTGCTTCTGGC GGGTGCCGCGGGCGTCCATCTTCTGCACCGGCTGGCACCCGCGCCGCACTCCCCGCATGGAGAGCGCATGCTGCTGGCGC CGATGATCGGCGTGCTGGAACCCTGCATCTGGGGCCAGCCCGCCCTGCCCGGTGCGTTGGCCGGCATGCAGGAGCAGTGC CGCGGCGCCCAGGGTTCGGCGGCTGCGCTGGTGGAATCCACTTTGCGGACGTTGCAGCCCGAGCCGCATGCGGCCGCCTC CGTTGACCTGGGCTACACGCTGCCGGTACCTTTGCTCAAGCTGTTCGAGCGGACGCAGGACGGCGGCTGGCGGATCGACC AGGCGATCGTGGACCGCCTGGTGCGGACCCTCCGGGACACCCCGCGCCCGGCCATCCTGTACCTGTTCTCGACGCACTTT TCATCCGAGGCCCCCATCGAGCCGGTCCTGGCGGCCGATCCATCGAACATGGGATGGACGCGCGACGGCCCGCTGGGCAT GGACGACTACTACGATTCGAAGGTCTTCAACTGGTCCTTCGCCACCACGCGCAATGCACTGACCGAGCGCAGGGCCGAAG CGGTCCGGGCCGTGGTGGACGCGGCATGCCGGCTTCCCGGGAAAGACCGCGCGAAGATCCGCGGCATCACGCTCCTGGGC GAGCTGCACCATTTGTTTCCGAATTTTCAGGCCGGGATGGGATTCGGCGGCACCTACCGAATCACCGATTACAGCCCGGC ATCCGTCGAGGGCTTCCGCGGCTACCTGCGCGCGGAATTCCGGGACATCGCGCAGTTCAACCGCGCGGTCGGCGCCGACT ATGCCTCGTTCGACGAGGTGGCTCCCCCGTCGCGCGACATCCGGTCGGAGCCCCTGCGCCGCTTCACGGAGCACATCGAT GGATTCGCCCAGGGCACGCTGCCGGTGGCCGGCTGGGCCTACGTGCCGGGCAGCACGCCGGAGCGTCCTGCCCGCGTGCA TGTGTACCGCAATGGCGAACGGGTGGGACAGACCACCGTGCACTGGGGACGGCAGGACGTGCTCGCGGCCAAGCCGGAAT TCGGCGACGCGAACACCGGCTGGCGCCTGGACCTGGATTTCAGGCGGCTCCCGCCCGGCATGCACCGGCTGGACATTTTC CTGGAAGCCCGACCCGGCCAGCTGACGCACCTGGGAACGCGCGACATCGCCATCATGGACCGCTCGCAGTCCACTCCGCA GCCGATGCCGCAGCGCGCACTTCCAGCCGCGGTCCCGCCACCGGATGCCCGGGTGCAGGCGCACATCGACTTTCCCGCGC AGGCATCGTCGTATTACTACAACCCGCTGGTCCCGCTGTGGCATGCATTCCGCGCCCGCCAGGTCGTGGACTACCTGCGG TACTTCGACGGCCTCTTGGAGCGGTCCTGCCTTTCCGGCGTGCCGCGCTATACCCACTAG
Upstream 100 bases:
>100_bases GGGATCGAAGCCCTCAAGTGTAGCCGGCCAGGTTGCGTCGCCCGCATGGACCTTGCCGCTTGGCTTACAGTCGCAAGCCA CCCGCCCACCCCGCCAACGC
Downstream 100 bases:
>100_bases ATCATCCCGTTCACCAATCCCGGCTGGGATGCGAACAAGTTCGCGATCCAGGACTCGCTGCGTCCTGCACAGACCGGCAT CCGGCTGGGCGTGAGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 499; Mature: 499
Protein sequence:
>499_residues MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR YFDGLLERSCLSGVPRYTH
Sequences:
>Translated_499_residues MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR YFDGLLERSCLSGVPRYTH >Mature_499_residues MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLEPCIWGQPALPGALAGMQEQC RGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLKLFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHF SSEAPIEPVLAADPSNMGWTRDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEVAPPSRDIRSEPLRRFTEHID GFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTVHWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIF LEARPGQLTHLGTRDIAIMDRSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR YFDGLLERSCLSGVPRYTH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55132; Mature: 55132
Theoretical pI: Translated: 8.80; Mature: 8.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH PCIWGQPALPGALAGMQEQCRGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLK HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHH LFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHFSSEAPIEPVLAADPSNMGWT HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCC RDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG CCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEV HHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC APPSRDIRSEPLRRFTEHIDGFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTV CCCCCHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHCCHHH HWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIFLEARPGQLTHLGTRDIAIMD HCCCHHHEECCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCEEECCCCCEEEEE RSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR CCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YFDGLLERSCLSGVPRYTH HHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQSSPRHPRSILPRAAMAVSAAAVLLAGAAGVHLLHRLAPAPHSPHGERMLLAPMIGVLE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHH PCIWGQPALPGALAGMQEQCRGAQGSAAALVESTLRTLQPEPHAAASVDLGYTLPVPLLK HHHCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCCHHHHHH LFERTQDGGWRIDQAIVDRLVRTLRDTPRPAILYLFSTHFSSEAPIEPVLAADPSNMGWT HHHHCCCCCEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCCEEECCCCCCCCC RDGPLGMDDYYDSKVFNWSFATTRNALTERRAEAVRAVVDAACRLPGKDRAKIRGITLLG CCCCCCCCHHCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHEEHHHHHH ELHHLFPNFQAGMGFGGTYRITDYSPASVEGFRGYLRAEFRDIAQFNRAVGADYASFDEV HHHHHCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHC APPSRDIRSEPLRRFTEHIDGFAQGTLPVAGWAYVPGSTPERPARVHVYRNGERVGQTTV CCCCCHHHHHHHHHHHHHHCCHHCCCCCCCEEEECCCCCCCCCCEEEEEECCCHHCCHHH HWGRQDVLAAKPEFGDANTGWRLDLDFRRLPPGMHRLDIFLEARPGQLTHLGTRDIAIMD HCCCHHHEECCCCCCCCCCCEEEEECHHHCCCCCEEEEEEEECCCCCEEECCCCCEEEEE RSQSTPQPMPQRALPAAVPPPDARVQAHIDFPAQASSYYYNPLVPLWHAFRARQVVDYLR CCCCCCCCCCHHCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH YFDGLLERSCLSGVPRYTH HHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA