Click here to switch to the map view.

The map label for this gene is 120612790

Identifier: 120612790

GI number: 120612790

Start: 4607316

End: 4608629

Strand: Reverse

Name: 120612790

Synonym: Aave_4153

Alternate gene names: NA

Gene position: 4608629-4607316 (Counterclockwise)

Preceding gene: 120612791

Following gene: 120612789

Centisome position: 86.1

GC content: 68.26

Gene sequence:

>1314_bases
ATGCCCTCTTTCTCTTCTGAAGCCCGTTTTCTGGGAGTCGATCTGCGCGTGCTGTGGCGCGACATCCGCCAGCCCTGGTC
GCACATGCACGACTGGCCCGTTTTCGCATGGCTTGCACCTGCGGCCCCGGTGCGCGTCATCCATCCCGACGGGCGGCAGT
CCGTCTGGCTGGGCCAAGGCCGCCGGGAGGACCACGGGGGTGCCGCCAAACCTCCCTTCGCCGCGGTGGAACTGCCGGAG
GATCTGGTGCTGCGCCGTTCGCTGGCGCTACCGCCGATGACGGCCATCGACGTGGCCCACGCATCCGCCCTGGAGGCACG
CTCCGTCAGCCCGTTCCCGGCGGGCGATCTGGCCTGGGGCCATCGCGCCCAATGGCTGCCCGGCGGAAACGTGCGAGTGG
ATCTGGTGCTCGTCTCGCGCAGGCAGATCGCGCAATACCTGGCGGACCGCGCCGACATCCTGGCAGGCGCGGAGCCGGAG
GTCTGGGTGCGTGCCGGCGATGGCGATCCCATCGTGCTGGATGGCTACGGCGAAGGATTGCGCAAGGCCCATGCGCTGCG
GTGGCGACGCACGGGTTTCGCGCTCCTGGGCACGATCGGATTGCTGCTGCTGGCCATCGCCATCACGCCGACCCTGCAAT
TGAGAGAGCGCGCGCTGGAAGCAGCCCGTTCCTATGCTGAAGTCGCGCAACGCGTGGAGCCGGTGGTCCGGCAGAGGGAA
TCGCTCATGCAGTCGGCGGAGAAACTCACCCAGCTGTCCGAACTGGTCTCCAGCCGCATCGAGCCCCTGAAAGTGCTCGA
TCGATTGACCCAACTGCTGCCGGACGATACCTATCTCCAGAGTTTCCGGCTCCAGGGCGCCAAGGTCACCATCGTCGGCA
TGACGGCGAACGCCTCCACCCTCATGCAACTGCTGGGCAATGAGGCCGGATTCAAGGAGGTCCGTGCTCCGTCCGCAGCG
ACCCGGATGGGCAACACGGGCAAAGAGTCCTTCGCCATCGAATTCATGCTGGATCCGAAGGTGTTCGGCGCACCTGTCAG
CGCGTCTGCCAAGTCCACCGCACCTGCCGCCACGGCCTCCGTGCCGGCTTCCGCGGCGTCCGCAGCTCCCGCGTCCGCCC
CTGGCGCAGCCGCTTCCGCGACCAGTGCCCCGGCCGCTTCTGCACCCGCCGCCCCTCCACCCGCAGGAACGTCTCCTCCT
TCCCGGGCCAGCTTTGGCGGCACGGCGACCTTCGGCGGAACCGCTCCCCGGGCGGCGGCGCCTGTCCGGAGTGCTTCTTC
CCCTTCCGCCGCAGCAACGCGCGACAAACCATGA

Upstream 100 bases:

>100_bases
CAGCGTCGATCTGACCGCACGCGCCCGTGATGGAGCTCCGTGGTATTCCTTCCGCACCGGGTCCAGCGTGGAGCCGGTGG
TCCGCAATCCCTGAAAAGCG

Downstream 100 bases:

>100_bases
AACGCATGCCTTCCCGAGAGCGGTTGATACTTGCCGCCACCCTGCTGCTGGTCCTCCTGCCCCTGGTCTTGATCGGCTGG
TACGTCGCCCAGCGCCACAT

Product: fimbrial assembly family protein

Products: NA

Alternate protein names: Fimbrial Assembly Protein; Fimbrial Assembly

Number of amino acids: Translated: 437; Mature: 436

Protein sequence:

>437_residues
MPSFSSEARFLGVDLRVLWRDIRQPWSHMHDWPVFAWLAPAAPVRVIHPDGRQSVWLGQGRREDHGGAAKPPFAAVELPE
DLVLRRSLALPPMTAIDVAHASALEARSVSPFPAGDLAWGHRAQWLPGGNVRVDLVLVSRRQIAQYLADRADILAGAEPE
VWVRAGDGDPIVLDGYGEGLRKAHALRWRRTGFALLGTIGLLLLAIAITPTLQLRERALEAARSYAEVAQRVEPVVRQRE
SLMQSAEKLTQLSELVSSRIEPLKVLDRLTQLLPDDTYLQSFRLQGAKVTIVGMTANASTLMQLLGNEAGFKEVRAPSAA
TRMGNTGKESFAIEFMLDPKVFGAPVSASAKSTAPAATASVPASAASAAPASAPGAAASATSAPAASAPAAPPPAGTSPP
SRASFGGTATFGGTAPRAAAPVRSASSPSAAATRDKP

Sequences:

>Translated_437_residues
MPSFSSEARFLGVDLRVLWRDIRQPWSHMHDWPVFAWLAPAAPVRVIHPDGRQSVWLGQGRREDHGGAAKPPFAAVELPE
DLVLRRSLALPPMTAIDVAHASALEARSVSPFPAGDLAWGHRAQWLPGGNVRVDLVLVSRRQIAQYLADRADILAGAEPE
VWVRAGDGDPIVLDGYGEGLRKAHALRWRRTGFALLGTIGLLLLAIAITPTLQLRERALEAARSYAEVAQRVEPVVRQRE
SLMQSAEKLTQLSELVSSRIEPLKVLDRLTQLLPDDTYLQSFRLQGAKVTIVGMTANASTLMQLLGNEAGFKEVRAPSAA
TRMGNTGKESFAIEFMLDPKVFGAPVSASAKSTAPAATASVPASAASAAPASAPGAAASATSAPAASAPAAPPPAGTSPP
SRASFGGTATFGGTAPRAAAPVRSASSPSAAATRDKP
>Mature_436_residues
PSFSSEARFLGVDLRVLWRDIRQPWSHMHDWPVFAWLAPAAPVRVIHPDGRQSVWLGQGRREDHGGAAKPPFAAVELPED
LVLRRSLALPPMTAIDVAHASALEARSVSPFPAGDLAWGHRAQWLPGGNVRVDLVLVSRRQIAQYLADRADILAGAEPEV
WVRAGDGDPIVLDGYGEGLRKAHALRWRRTGFALLGTIGLLLLAIAITPTLQLRERALEAARSYAEVAQRVEPVVRQRES
LMQSAEKLTQLSELVSSRIEPLKVLDRLTQLLPDDTYLQSFRLQGAKVTIVGMTANASTLMQLLGNEAGFKEVRAPSAAT
RMGNTGKESFAIEFMLDPKVFGAPVSASAKSTAPAATASVPASAASAAPASAPGAAASATSAPAASAPAAPPPAGTSPPS
RASFGGTATFGGTAPRAAAPVRSASSPSAAATRDKP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46038; Mature: 45907

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSFSSEARFLGVDLRVLWRDIRQPWSHMHDWPVFAWLAPAAPVRVIHPDGRQSVWLGQG
CCCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEECCCCCCEEEECCC
RREDHGGAAKPPFAAVELPEDLVLRRSLALPPMTAIDVAHASALEARSVSPFPAGDLAWG
CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
HRAQWLPGGNVRVDLVLVSRRQIAQYLADRADILAGAEPEVWVRAGDGDPIVLDGYGEGL
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHH
RKAHALRWRRTGFALLGTIGLLLLAIAITPTLQLRERALEAARSYAEVAQRVEPVVRQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLMQSAEKLTQLSELVSSRIEPLKVLDRLTQLLPDDTYLQSFRLQGAKVTIVGMTANAST
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH
LMQLLGNEAGFKEVRAPSAATRMGNTGKESFAIEFMLDPKVFGAPVSASAKSTAPAATAS
HHHHHCCCCCHHHHCCCHHHHHCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCC
VPASAASAAPASAPGAAASATSAPAASAPAAPPPAGTSPPSRASFGGTATFGGTAPRAAA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
PVRSASSPSAAATRDKP
CCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PSFSSEARFLGVDLRVLWRDIRQPWSHMHDWPVFAWLAPAAPVRVIHPDGRQSVWLGQG
CCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCHHEEECCCCCEEEECCCCCCEEEECCC
RREDHGGAAKPPFAAVELPEDLVLRRSLALPPMTAIDVAHASALEARSVSPFPAGDLAWG
CCCCCCCCCCCCCEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
HRAQWLPGGNVRVDLVLVSRRQIAQYLADRADILAGAEPEVWVRAGDGDPIVLDGYGEGL
CCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEECCCCEEEECCCCHHH
RKAHALRWRRTGFALLGTIGLLLLAIAITPTLQLRERALEAARSYAEVAQRVEPVVRQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLMQSAEKLTQLSELVSSRIEPLKVLDRLTQLLPDDTYLQSFRLQGAKVTIVGMTANAST
HHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHH
LMQLLGNEAGFKEVRAPSAATRMGNTGKESFAIEFMLDPKVFGAPVSASAKSTAPAATAS
HHHHHCCCCCHHHHCCCHHHHHCCCCCCCCEEEEEEECCHHCCCCCCCCCCCCCCCCCCC
VPASAASAAPASAPGAAASATSAPAASAPAAPPPAGTSPPSRASFGGTATFGGTAPRAAA
CCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHC
PVRSASSPSAAATRDKP
CCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA