Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
---|---|
Accession | NC_008752 |
Length | 5,352,772 |
Click here to switch to the map view.
The map label for this gene is 120612781
Identifier: 120612781
GI number: 120612781
Start: 4596897
End: 4597850
Strand: Reverse
Name: 120612781
Synonym: Aave_4144
Alternate gene names: NA
Gene position: 4597850-4596897 (Counterclockwise)
Preceding gene: 120612782
Following gene: 120612780
Centisome position: 85.9
GC content: 65.93
Gene sequence:
>954_bases GTGACTACACGTTGGGCCCGCGCCTGGTCGCGGTGGAAAAGGGAAAGCCGGGATGTGCTGGAGGTGGTGCTGCTGCCGGG GCTCGCGGCCGTGCTGCCGTGGCCCGTGTGCTTTCGCCTGTTTCGCCGCATGGCCCGATGGCGGTGGCTTTACCGTGGCG CCTGCGAGGCAGCGTTCGCGCAGGCCAGCTCACGGGGATGGGTACGCGTTCCTGCCGACGATTGGCTGGCGGAGCGCAGG CTGGTGACCTTGCTGGACCATGCGGACCATTACCTTTTCCGCACGCGCTCACCGGCCTGGATGCGGCGCCATGTGGAGGT GGACGGTGCATGGTCAGGGGCTGGAAAGGCGGGACTGCTGCTTACCTTCCACTGGGGCGCCGGGATGTGGGCGCTGTGCC ATGCATCCGCGGAGGGCATGCAGGGCAATATGGTGCTGGCCGCTCCTGGCGGGCGCGATTTCATTGGCCGATGGGTGTTC GGCCGGTACGTGCGCGCGCGCATGCGCTCGGTCGAGATGGCGTTGAACCGCCCGGTGGTCTTCGTGCCTGGCGGCATGGA AGGCGTCCGGCAAGCGCTTGGGCGCGAAGAACAGGTGGTGGTGGTGATCGATGTGCCGGAAGACCAGGTCAACGTCACGC GGACCACGATCATCCTGGGTCAACCCGTCAGCGTGCCGGCCGTCCTGCCGCAGATGGCGGTGGATCGCTTGCTGCCGACG ACTGTTTTCTACATGGGCGTCGATTTGCAGTCGGGACGCAGGAAGCTCAGGATCTTACCGCTCGGTACGTGCAGTGATCC TCAGGAGCTGACCGACCGGGTTTTCGGGCACTTCGACGAACTGCTCAGGCAACGGCCTGCCGCGTGGCATTTGTGGACGG AAGCGCCGCGCTTTTTTCGCGCGCGTGCCGATGGCGGGAGCAACCCGATGGAGGAAAAGGCGGTGAATCCATGA
Upstream 100 bases:
>100_bases GTGGTGTATGACGAATGGTTCCAGTTCCTGCATTTCCATTTTTCTTTTCCAAAGCCCATGCCGGGCCTTGTCCGTCTGCC GCACCGCTGGGAATGAGTTG
Downstream 100 bases:
>100_bases ACTGGATGACTCGATGGAAGGAGCGTCTCTGGGGGCTGGCCCCGTGGGATGGCGAACGGATCACGGACGAATGGTTCCGC GCGCATTTCGGTTACGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 317; Mature: 316
Protein sequence:
>317_residues MTTRWARAWSRWKRESRDVLEVVLLPGLAAVLPWPVCFRLFRRMARWRWLYRGACEAAFAQASSRGWVRVPADDWLAERR LVTLLDHADHYLFRTRSPAWMRRHVEVDGAWSGAGKAGLLLTFHWGAGMWALCHASAEGMQGNMVLAAPGGRDFIGRWVF GRYVRARMRSVEMALNRPVVFVPGGMEGVRQALGREEQVVVVIDVPEDQVNVTRTTIILGQPVSVPAVLPQMAVDRLLPT TVFYMGVDLQSGRRKLRILPLGTCSDPQELTDRVFGHFDELLRQRPAAWHLWTEAPRFFRARADGGSNPMEEKAVNP
Sequences:
>Translated_317_residues MTTRWARAWSRWKRESRDVLEVVLLPGLAAVLPWPVCFRLFRRMARWRWLYRGACEAAFAQASSRGWVRVPADDWLAERR LVTLLDHADHYLFRTRSPAWMRRHVEVDGAWSGAGKAGLLLTFHWGAGMWALCHASAEGMQGNMVLAAPGGRDFIGRWVF GRYVRARMRSVEMALNRPVVFVPGGMEGVRQALGREEQVVVVIDVPEDQVNVTRTTIILGQPVSVPAVLPQMAVDRLLPT TVFYMGVDLQSGRRKLRILPLGTCSDPQELTDRVFGHFDELLRQRPAAWHLWTEAPRFFRARADGGSNPMEEKAVNP >Mature_316_residues TTRWARAWSRWKRESRDVLEVVLLPGLAAVLPWPVCFRLFRRMARWRWLYRGACEAAFAQASSRGWVRVPADDWLAERRL VTLLDHADHYLFRTRSPAWMRRHVEVDGAWSGAGKAGLLLTFHWGAGMWALCHASAEGMQGNMVLAAPGGRDFIGRWVFG RYVRARMRSVEMALNRPVVFVPGGMEGVRQALGREEQVVVVIDVPEDQVNVTRTTIILGQPVSVPAVLPQMAVDRLLPTT VFYMGVDLQSGRRKLRILPLGTCSDPQELTDRVFGHFDELLRQRPAAWHLWTEAPRFFRARADGGSNPMEEKAVNP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36022; Mature: 35891
Theoretical pI: Translated: 10.97; Mature: 10.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTRWARAWSRWKRESRDVLEVVLLPGLAAVLPWPVCFRLFRRMARWRWLYRGACEAAFA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QASSRGWVRVPADDWLAERRLVTLLDHADHYLFRTRSPAWMRRHVEVDGAWSGAGKAGLL HHCCCCEEECCCHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHEEEECCCCCCCCCCCEE LTFHWGAGMWALCHASAEGMQGNMVLAAPGGRDFIGRWVFGRYVRARMRSVEMALNRPVV EEEECCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE FVPGGMEGVRQALGREEQVVVVIDVPEDQVNVTRTTIILGQPVSVPAVLPQMAVDRLLPT EECCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH TVFYMGVDLQSGRRKLRILPLGTCSDPQELTDRVFGHFDELLRQRPAAWHLWTEAPRFFR HHHHEECCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCHHHE ARADGGSNPMEEKAVNP EECCCCCCCCHHCCCCC >Mature Secondary Structure TTRWARAWSRWKRESRDVLEVVLLPGLAAVLPWPVCFRLFRRMARWRWLYRGACEAAFA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH QASSRGWVRVPADDWLAERRLVTLLDHADHYLFRTRSPAWMRRHVEVDGAWSGAGKAGLL HHCCCCEEECCCHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHEEEECCCCCCCCCCCEE LTFHWGAGMWALCHASAEGMQGNMVLAAPGGRDFIGRWVFGRYVRARMRSVEMALNRPVV EEEECCCCCHHHHHCCCCCCCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEE FVPGGMEGVRQALGREEQVVVVIDVPEDQVNVTRTTIILGQPVSVPAVLPQMAVDRLLPT EECCCHHHHHHHHCCCCEEEEEEECCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHH TVFYMGVDLQSGRRKLRILPLGTCSDPQELTDRVFGHFDELLRQRPAAWHLWTEAPRFFR HHHHEECCHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEHHCCCHHHE ARADGGSNPMEEKAVNP EECCCCCCCCHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA