Definition Acidovorax citrulli AAC00-1 chromosome, complete genome.
Accession NC_008752
Length 5,352,772

Click here to switch to the map view.

The map label for this gene is 120612768

Identifier: 120612768

GI number: 120612768

Start: 4583349

End: 4583636

Strand: Direct

Name: 120612768

Synonym: Aave_4131

Alternate gene names: NA

Gene position: 4583349-4583636 (Clockwise)

Preceding gene: 120612767

Following gene: 120612769

Centisome position: 85.63

GC content: 68.75

Gene sequence:

>288_bases
ATGCCGTTCTACCGCCTCAAGACCGGCCTGGTGCATGTGCGGGGCACGAAGCTCCCACCGCCCTGCAGCGCGCGAGTGCT
GGTGGACGGCGAGCAGGTGCGTTGCATGGCGCCCAGCGAGTACCTGTGTGACGGCCCGAGCACGACCGATCCTCGCAGCA
CCTGTGACGCTGCCCTGTGCGAGGCCCACGCGCACCGCTTCGACGTCAACCGCCACCACTGCCCGTCCTGCCACCTGGCG
CACAGCGACGCGTCCGGGCAGCGCAGCCTGTTCACCTCACTCGTTTAA

Upstream 100 bases:

>100_bases
TGGAGCGCTTTCGCTGGCCTCATCGCATCAAGCGGGATACGTGGGCCTGGGACTTTGCCGTCAGGGTGATGCGTCTGCCC
TTCGCTACGGAGGCACGCTG

Downstream 100 bases:

>100_bases
TGCCATGGCACGAACCTTCGCGACCCACACGAACCGGCCCGTCGTGGAGGCCCAGCGCAAGCGCGACCTGGGCCTCATCC
ACCAGGGCAAGTCGGCCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 95; Mature: 94

Protein sequence:

>95_residues
MPFYRLKTGLVHVRGTKLPPPCSARVLVDGEQVRCMAPSEYLCDGPSTTDPRSTCDAALCEAHAHRFDVNRHHCPSCHLA
HSDASGQRSLFTSLV

Sequences:

>Translated_95_residues
MPFYRLKTGLVHVRGTKLPPPCSARVLVDGEQVRCMAPSEYLCDGPSTTDPRSTCDAALCEAHAHRFDVNRHHCPSCHLA
HSDASGQRSLFTSLV
>Mature_94_residues
PFYRLKTGLVHVRGTKLPPPCSARVLVDGEQVRCMAPSEYLCDGPSTTDPRSTCDAALCEAHAHRFDVNRHHCPSCHLAH
SDASGQRSLFTSLV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10418; Mature: 10287

Theoretical pI: Translated: 7.81; Mature: 7.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

7.4 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
9.5 %Cys+Met (Translated Protein)
7.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFYRLKTGLVHVRGTKLPPPCSARVLVDGEQVRCMAPSEYLCDGPSTTDPRSTCDAALC
CCCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCEECCCCCCCCCCHHHHHHHH
EAHAHRFDVNRHHCPSCHLAHSDASGQRSLFTSLV
HHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHCC
>Mature Secondary Structure 
PFYRLKTGLVHVRGTKLPPPCSARVLVDGEQVRCMAPSEYLCDGPSTTDPRSTCDAALC
CCCCCCCCEEEEECCCCCCCCCCEEEECCCEEEEECCCCEECCCCCCCCCCHHHHHHHH
EAHAHRFDVNRHHCPSCHLAHSDASGQRSLFTSLV
HHHHHHCCCCCCCCCCCEEECCCCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA