Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612731
Identifier: 120612731
GI number: 120612731
Start: 4547193
End: 4547621
Strand: Reverse
Name: 120612731
Synonym: Aave_4094
Alternate gene names: NA
Gene position: 4547621-4547193 (Counterclockwise)
Preceding gene: 120612732
Following gene: 120612730
Centisome position: 84.96
GC content: 71.33
Gene sequence:
>429_bases ATGAACGACTGGGAGATCGGACCTGCGTTGGCCCTGGCGCAGCTCCAGGCCGCCATCGCTCGCGCTGATCAGGGCTCCGG CAACGCGCGCGTGCGCTGCTACCTCACGGAGCGGCCGGACTCTATCGCGACGGCTCACGCCGACTCGGCGCAGGTCGAGA TCGTCCTGGCAAAGCCCTGTGCGTCCATCGTCGACGGGATGCTCGTGATGCACCCGGCCGAGGACGCGAGCATGGTCTTG CAGACGGGCATTCCCCGCTGGGGTGACTGGATCGCGGCCAGCGGCGCGATCCTGGCCCGCGCCACCGTCTCCGACATGGA CCACGGCGGCGGCTGGAGGCTGGTGGGCGGTGAGACGCCGTCCGGCGAGACCTCGCCTCTGCTGCGTGCCGGCGGGCTGG TCCAGCTGGGCGCCACCGCGCTGTCGTGA
Upstream 100 bases:
>100_bases CAGGAATCGACACGCGACAGCAGTTCCTCGTGCTGGCCGAGGACGTCCAGGGCAACTTCCGGCCCGTGGCGGCGAGCAGG CTTGTTCCCGAGGTGGCGCC
Downstream 100 bases:
>100_bases GGGCCTGACGTGTGGCCGACACCGATCTGCTTTTCTCCGATGGCCGCAATCCATCCGACAGCCCTGTCGAAATCGTCTTC GGTGACGATGATGGCCTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 142; Mature: 142
Protein sequence:
>142_residues MNDWEIGPALALAQLQAAIARADQGSGNARVRCYLTERPDSIATAHADSAQVEIVLAKPCASIVDGMLVMHPAEDASMVL QTGIPRWGDWIAASGAILARATVSDMDHGGGWRLVGGETPSGETSPLLRAGGLVQLGATALS
Sequences:
>Translated_142_residues MNDWEIGPALALAQLQAAIARADQGSGNARVRCYLTERPDSIATAHADSAQVEIVLAKPCASIVDGMLVMHPAEDASMVL QTGIPRWGDWIAASGAILARATVSDMDHGGGWRLVGGETPSGETSPLLRAGGLVQLGATALS >Mature_142_residues MNDWEIGPALALAQLQAAIARADQGSGNARVRCYLTERPDSIATAHADSAQVEIVLAKPCASIVDGMLVMHPAEDASMVL QTGIPRWGDWIAASGAILARATVSDMDHGGGWRLVGGETPSGETSPLLRAGGLVQLGATALS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14644; Mature: 14644
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDWEIGPALALAQLQAAIARADQGSGNARVRCYLTERPDSIATAHADSAQVEIVLAKPC CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCH ASIVDGMLVMHPAEDASMVLQTGIPRWGDWIAASGAILARATVSDMDHGGGWRLVGGETP HHHHCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC SGETSPLLRAGGLVQLGATALS CCCCCCHHHCCCEEEECCEECC >Mature Secondary Structure MNDWEIGPALALAQLQAAIARADQGSGNARVRCYLTERPDSIATAHADSAQVEIVLAKPC CCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCEEEECCCCCEEEEEEECCH ASIVDGMLVMHPAEDASMVLQTGIPRWGDWIAASGAILARATVSDMDHGGGWRLVGGETP HHHHCCEEEEECCCCHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCCCEEEECCCCC SGETSPLLRAGGLVQLGATALS CCCCCCHHHCCCEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA