Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612730
Identifier: 120612730
GI number: 120612730
Start: 4545289
End: 4547181
Strand: Reverse
Name: 120612730
Synonym: Aave_4093
Alternate gene names: NA
Gene position: 4547181-4545289 (Counterclockwise)
Preceding gene: 120612731
Following gene: 120612729
Centisome position: 84.95
GC content: 70.05
Gene sequence:
>1893_bases GTGGCCGACACCGATCTGCTTTTCTCCGATGGCCGCAATCCATCCGACAGCCCTGTCGAAATCGTCTTCGGTGACGATGA TGGCCTCCCGCCTGGCAGCGTTGAACTGCGGGCGGCGGGCCGGATCACCGGGCTGCGAGGCTATGTCGCCGTGCGGACTG TCGTGCGTGCCACGGCGGTGGGCCGGATCACCGGGTTGCGTGGCTACGTGGCGGTGCGGTACGACATCAACGTTGAGCGC CCGGTCGTGGGATCTGTCCGCGTCGGATGGCAGCAGGCATCGAGGCTGCATGCCGCCACCGTCCTTCGCACCGAGCAGGG GCAGCAGCTGCGCGCTGGCGTGGAGCAGGCCTGGCAGGACGCTCGTGGCATTGCGGCGGCCCTGCAGGTGCGCTGGGAAC TGGCGTCACGCCTGGCGCGCGTGGCCCGCGTGGCGTGGCAGGAGTCCGTTCGCCTCGCGACCGTACCAGCGCTCCAGCGC TTGGAGGATGCGGCCCGCCTGCGCGTCGGCAGCTGCCAGGGCTTCCAGGAAGCGGTGCCGCGCAGTGCTGCCGCGATGCA GGGCTTCCAGGAAGCGCTACGGCTGCGGCTTGTCGCAGTCCAGCGCATGCAGGACGCAGCGCATGTCGGCGCGTCGGTTC GGTCGGGCTTCCGGCATGCCAGGCCGCTTTCACAGGCTTGGGCCTTGCGCTACGAGGAGGCCCGCCCGCCAGTTGCTGGC ATCACGCCGCCGCCCCAGCCGCCGAAGCCAGATCCCTGCTACGTGCCGCAGGTGCCCGTGCATCTGGCCTTCGACCAGGC GGTGGACAGCGGCCTGCCAGCACACCTTGTTTTCGTTTGCGATCGCCACTCCGACCCGGAGCCAGGCGGCACCATCGTTG TTCCGGTCCGGAGGGTCTACATCGTGCTCAACTCCATCACCCTTCGCCGGGTCGAGAGCGGTGCCGAGCTGCATGCGCAC AGCATGAGCATGTCCCTCGACTACCAGTCGTGGACCTGGACCTGGTCGGCCTCGCTCCACTACGACTCGGCCGCGCATCT GGGCCGCGACAGCGCGGGCGACCCGGCCGAGCTGGAGGCCGTCGTCAATGGCATGCCTTTCCGGTTGCGGCTGGAGCGCC TGGTCGAGGACCGCAGGTTCCTGCCGCAGTTGCGGTGGGCCGTGTCCGGCAAGGGCACGGCGATGATCCTCGGCGCACCG TATGCGCCCACGCGCACGTTCTCCAGCTCCGCGGCCAGCACGGCACAGCAGCTCGCGGCCGACGCGCTCACCGTCAACGG CGTGGGCATCGGCTGGGCGCTGGACTGGCAGATCGTCGACTGGCTCGTGCCCGCCGGCGCCTGGTCGGTGCAGGGCACGC CCATTGACGCGATCAACGACATCGCTGCTGCCGCGGGCGGCTACGTGCAGCCGCATGCGACCGACCCGGTGCTGCGCGTG CTGCCGCGCTACCCGGCCGCGTCCTGGGCATGGGGCAGCGTGGTGCCGGACTACGAGATCCCGGGCTCTGCCGCCGAGGT GGTGGGCATCGAGCACGTGGACAAGCCGGCCTATGACCGAGTGTTCGTGGGTGGCGTGGGTGCAGGCGTGTTCGGCCCCT TCAAACGCTCCGGCACCGCCGGCACGACCCTGGCGCCGCCGGTCAATCATGCGCTGATCACGCACGCCGACGTGCACCGC GCGCGCGGCATCGCTGAGCTGTCCGACACGGGCCGGCAGGAGCATGTCTCGCTCCGGATGCAGGTGCTGCCTGACACCGG GGTGATCGTGCCCGGCCAGTTCGTGCGGTACGTCGGCGACCGGACCGTCGTGGGGATCGTGCGGCGCACAGCGATCGACT GGAGCTGGCCTACGCTGCGCCAGACGTTGGAGGTCGAGACCCATGCTGCATAA
Upstream 100 bases:
>100_bases TGGTGGGCGGTGAGACGCCGTCCGGCGAGACCTCGCCTCTGCTGCGTGCCGGCGGGCTGGTCCAGCTGGGCGCCACCGCG CTGTCGTGAGGGCCTGACGT
Downstream 100 bases:
>100_bases CCCCTACAGGGCCTTTCTCGCCCTGATCCCGGCCGATCCTCTGCTGGTCGGCGACGTGGTGGCCGTCACGGGTGGCGTCG CCATCGTGCAGCTACCTGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 630; Mature: 629
Protein sequence:
>630_residues MADTDLLFSDGRNPSDSPVEIVFGDDDGLPPGSVELRAAGRITGLRGYVAVRTVVRATAVGRITGLRGYVAVRYDINVER PVVGSVRVGWQQASRLHAATVLRTEQGQQLRAGVEQAWQDARGIAAALQVRWELASRLARVARVAWQESVRLATVPALQR LEDAARLRVGSCQGFQEAVPRSAAAMQGFQEALRLRLVAVQRMQDAAHVGASVRSGFRHARPLSQAWALRYEEARPPVAG ITPPPQPPKPDPCYVPQVPVHLAFDQAVDSGLPAHLVFVCDRHSDPEPGGTIVVPVRRVYIVLNSITLRRVESGAELHAH SMSMSLDYQSWTWTWSASLHYDSAAHLGRDSAGDPAELEAVVNGMPFRLRLERLVEDRRFLPQLRWAVSGKGTAMILGAP YAPTRTFSSSAASTAQQLAADALTVNGVGIGWALDWQIVDWLVPAGAWSVQGTPIDAINDIAAAAGGYVQPHATDPVLRV LPRYPAASWAWGSVVPDYEIPGSAAEVVGIEHVDKPAYDRVFVGGVGAGVFGPFKRSGTAGTTLAPPVNHALITHADVHR ARGIAELSDTGRQEHVSLRMQVLPDTGVIVPGQFVRYVGDRTVVGIVRRTAIDWSWPTLRQTLEVETHAA
Sequences:
>Translated_630_residues MADTDLLFSDGRNPSDSPVEIVFGDDDGLPPGSVELRAAGRITGLRGYVAVRTVVRATAVGRITGLRGYVAVRYDINVER PVVGSVRVGWQQASRLHAATVLRTEQGQQLRAGVEQAWQDARGIAAALQVRWELASRLARVARVAWQESVRLATVPALQR LEDAARLRVGSCQGFQEAVPRSAAAMQGFQEALRLRLVAVQRMQDAAHVGASVRSGFRHARPLSQAWALRYEEARPPVAG ITPPPQPPKPDPCYVPQVPVHLAFDQAVDSGLPAHLVFVCDRHSDPEPGGTIVVPVRRVYIVLNSITLRRVESGAELHAH SMSMSLDYQSWTWTWSASLHYDSAAHLGRDSAGDPAELEAVVNGMPFRLRLERLVEDRRFLPQLRWAVSGKGTAMILGAP YAPTRTFSSSAASTAQQLAADALTVNGVGIGWALDWQIVDWLVPAGAWSVQGTPIDAINDIAAAAGGYVQPHATDPVLRV LPRYPAASWAWGSVVPDYEIPGSAAEVVGIEHVDKPAYDRVFVGGVGAGVFGPFKRSGTAGTTLAPPVNHALITHADVHR ARGIAELSDTGRQEHVSLRMQVLPDTGVIVPGQFVRYVGDRTVVGIVRRTAIDWSWPTLRQTLEVETHAA >Mature_629_residues ADTDLLFSDGRNPSDSPVEIVFGDDDGLPPGSVELRAAGRITGLRGYVAVRTVVRATAVGRITGLRGYVAVRYDINVERP VVGSVRVGWQQASRLHAATVLRTEQGQQLRAGVEQAWQDARGIAAALQVRWELASRLARVARVAWQESVRLATVPALQRL EDAARLRVGSCQGFQEAVPRSAAAMQGFQEALRLRLVAVQRMQDAAHVGASVRSGFRHARPLSQAWALRYEEARPPVAGI TPPPQPPKPDPCYVPQVPVHLAFDQAVDSGLPAHLVFVCDRHSDPEPGGTIVVPVRRVYIVLNSITLRRVESGAELHAHS MSMSLDYQSWTWTWSASLHYDSAAHLGRDSAGDPAELEAVVNGMPFRLRLERLVEDRRFLPQLRWAVSGKGTAMILGAPY APTRTFSSSAASTAQQLAADALTVNGVGIGWALDWQIVDWLVPAGAWSVQGTPIDAINDIAAAAGGYVQPHATDPVLRVL PRYPAASWAWGSVVPDYEIPGSAAEVVGIEHVDKPAYDRVFVGGVGAGVFGPFKRSGTAGTTLAPPVNHALITHADVHRA RGIAELSDTGRQEHVSLRMQVLPDTGVIVPGQFVRYVGDRTVVGIVRRTAIDWSWPTLRQTLEVETHAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68101; Mature: 67970
Theoretical pI: Translated: 8.16; Mature: 8.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADTDLLFSDGRNPSDSPVEIVFGDDDGLPPGSVELRAAGRITGLRGYVAVRTVVRATAV CCCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH GRITGLRGYVAVRYDINVERPVVGSVRVGWQQASRLHAATVLRTEQGQQLRAGVEQAWQD HHHCCCCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH ARGIAAALQVRWELASRLARVARVAWQESVRLATVPALQRLEDAARLRVGSCQGFQEAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHEECCCCCCHHHHCC RSAAAMQGFQEALRLRLVAVQRMQDAAHVGASVRSGFRHARPLSQAWALRYEEARPPVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC ITPPPQPPKPDPCYVPQVPVHLAFDQAVDSGLPAHLVFVCDRHSDPEPGGTIVVPVRRVY CCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEHHEEE IVLNSITLRRVESGAELHAHSMSMSLDYQSWTWTWSASLHYDSAAHLGRDSAGDPAELEA HHHHHHHEEHHHCCCCEEEEEEEEEEECCCEEEEEEEEEECCCHHHCCCCCCCCHHHHHH VVNGMPFRLRLERLVEDRRFLPQLRWAVSGKGTAMILGAPYAPTRTFSSSAASTAQQLAA HHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH DALTVNGVGIGWALDWQIVDWLVPAGAWSVQGTPIDAINDIAAAAGGYVQPHATDPVLRV HHEEECCEEEEEEEHHEEEEHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHH LPRYPAASWAWGSVVPDYEIPGSAAEVVGIEHVDKPAYDRVFVGGVGAGVFGPFKRSGTA HCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC GTTLAPPVNHALITHADVHRARGIAELSDTGRQEHVSLRMQVLPDTGVIVPGQFVRYVGD CCCCCCCCCCEEEEEHHHHHHCCCHHHHHCCCHHEEEEEEEECCCCCEECCHHHHHHHCC RTVVGIVRRTAIDWSWPTLRQTLEVETHAA CHHHHHHHHHCCCCCCHHHHHHHCCCCCCC >Mature Secondary Structure ADTDLLFSDGRNPSDSPVEIVFGDDDGLPPGSVELRAAGRITGLRGYVAVRTVVRATAV CCCCEEEECCCCCCCCCEEEEECCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHH GRITGLRGYVAVRYDINVERPVVGSVRVGWQQASRLHAATVLRTEQGQQLRAGVEQAWQD HHHCCCCEEEEEEEECCCCCCCCCCEEECHHHHHHHHHHHEEECCCCHHHHHHHHHHHHH ARGIAAALQVRWELASRLARVARVAWQESVRLATVPALQRLEDAARLRVGSCQGFQEAVP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHEECCCCCCHHHHCC RSAAAMQGFQEALRLRLVAVQRMQDAAHVGASVRSGFRHARPLSQAWALRYEEARPPVAG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCC ITPPPQPPKPDPCYVPQVPVHLAFDQAVDSGLPAHLVFVCDRHSDPEPGGTIVVPVRRVY CCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCCCEEEEEEEECCCCCCCCCEEEEEHHEEE IVLNSITLRRVESGAELHAHSMSMSLDYQSWTWTWSASLHYDSAAHLGRDSAGDPAELEA HHHHHHHEEHHHCCCCEEEEEEEEEEECCCEEEEEEEEEECCCHHHCCCCCCCCHHHHHH VVNGMPFRLRLERLVEDRRFLPQLRWAVSGKGTAMILGAPYAPTRTFSSSAASTAQQLAA HHCCCCHHHHHHHHHHHHHHHHHHHHEECCCCCEEEEECCCCCCCCCCHHHHHHHHHHHH DALTVNGVGIGWALDWQIVDWLVPAGAWSVQGTPIDAINDIAAAAGGYVQPHATDPVLRV HHEEECCEEEEEEEHHEEEEHHHCCCCEEECCCCHHHHHHHHHHCCCCCCCCCCCHHHHH LPRYPAASWAWGSVVPDYEIPGSAAEVVGIEHVDKPAYDRVFVGGVGAGVFGPFKRSGTA HCCCCCCCCCCCCCCCCCCCCCCHHHEEEHHHCCCCCCCEEEECCCCCCCCCCCCCCCCC GTTLAPPVNHALITHADVHRARGIAELSDTGRQEHVSLRMQVLPDTGVIVPGQFVRYVGD CCCCCCCCCCEEEEEHHHHHHCCCHHHHHCCCHHEEEEEEEECCCCCEECCHHHHHHHCC RTVVGIVRRTAIDWSWPTLRQTLEVETHAA CHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA