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The map label for this gene is 120612727

Identifier: 120612727

GI number: 120612727

Start: 4543544

End: 4544572

Strand: Reverse

Name: 120612727

Synonym: Aave_4090

Alternate gene names: NA

Gene position: 4544572-4543544 (Counterclockwise)

Preceding gene: 120612728

Following gene: 120612726

Centisome position: 84.9

GC content: 65.4

Gene sequence:

>1029_bases
GTGCCGCGCCAGGGTGAGGCGGATAGGGCCGAGCTGCTGGGCGTGGGTGTCAACCGTCACGGTTTCCGGTTGATCAGGCT
CGGCGGGCGGCAGAGAGAGGATCGCGTCTGCGACCTCTTCGCCCAGCACCCAGGCGAGGTCGCCATTGTCGGTAAGCTCG
TACATAGACGGGATTCTGGCGCTGAATCTTTTAAACCACAGTGCCAAAGGGAGCGTTACGCGGCGCCAAAGCGACCGTTA
AAACGCGCCAAAGCGTGCGGCGCGCAATCGGTGTTTACCCCTAATTCCTTCCAGCCCCCGGGCCAAGGCTGGCTGCCACC
ATTCTTTTGTTGCAAAATAGCACGATCGTTCGTTTTATTTCTTGCTGCCGTGCCCCCCACTGTCTCTTCCAAAACCCAGC
GTCCCGCCTCCGCGCGGGAGGGCCGTGCGCTGCAGAAAGGCCAGCAGACCAAGGCGGCCATCGTCGATGCGGCGCTGGGG
CTGGCCACGCACATCGGGCTGGAGGGCCTGTCCATCGGCGCTCTGGCCGACGTGACCGGCATGAGCAAGTCGGGAGTCTT
CGCGCACTTCGGCTCGCGCGAGGAACTGCAGATATCCGTCGTCCGCGAATACCACGTGCGGTTCGAGCACGAGGTGTTCT
ATCCCGCCATGTCGGCGCCCCGCGGATTGCCCCGCCTGCGCGCCCTGTTCGACAACTGGATGAAGCGCACCTCCATCGAG
ATCGACTCGGGCTGCATCTACATCAGCGGGGCCGTCGAGTTCGACGACCGGACGGGGCCGGTGCGCGACGCGCTCGCGAA
TTCGGTCCTCACCTGGCACGCCGCCATGAAGCGGGCGATCGACCAGTGCAAGGAGCTGGGCGAGGTGGGCGCCGACGTGG
AGTCCGAGCAGATGCTGTTCGAGATCCACGGCCTTATCCTTGCGCTGCACTACGAGGCGCGCTTCCTGCAGACGCCCGGC
TCCCTGGGCCGGGCCACGGCCGGCTTCGACAACATCCTCGCCCGCTATGCCGCCAGGCCGGCGGGTTGA

Upstream 100 bases:

>100_bases
GTCCGGATCAACGTTGGGTTTTGGGCGGTGTCCCGAGCGGCAAGCGGTCGGCTCGGCTCGCGACCCATATCCAGAACACC
CTCTTGCCGCGCTTGTAGCG

Downstream 100 bases:

>100_bases
ACGTTTTTTTCGTCTTTTCCGCCTACGCATTCCACCATCCAACGCACCGAACTAGGAGCCCATCCATGCCGACCTACACG
CCCTCCCTGCGCGACATGCA

Product: TetR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator; TetR Family Transcriptional Regulatory Protein; Regulatory Protein TetR; TetR Family Regulatory Protein; TetR/AcrR Family Transcriptional Regulator; Transcriptional Regulator TetR Family Protein; Transcriptional Regulator Tetr Family; Transcription Regulator Protein; TetR Family Regulatory

Number of amino acids: Translated: 342; Mature: 341

Protein sequence:

>342_residues
MPRQGEADRAELLGVGVNRHGFRLIRLGGRQREDRVCDLFAQHPGEVAIVGKLVHRRDSGAESFKPQCQRERYAAPKRPL
KRAKACGAQSVFTPNSFQPPGQGWLPPFFCCKIARSFVLFLAAVPPTVSSKTQRPASAREGRALQKGQQTKAAIVDAALG
LATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVVREYHVRFEHEVFYPAMSAPRGLPRLRALFDNWMKRTSIE
IDSGCIYISGAVEFDDRTGPVRDALANSVLTWHAAMKRAIDQCKELGEVGADVESEQMLFEIHGLILALHYEARFLQTPG
SLGRATAGFDNILARYAARPAG

Sequences:

>Translated_342_residues
MPRQGEADRAELLGVGVNRHGFRLIRLGGRQREDRVCDLFAQHPGEVAIVGKLVHRRDSGAESFKPQCQRERYAAPKRPL
KRAKACGAQSVFTPNSFQPPGQGWLPPFFCCKIARSFVLFLAAVPPTVSSKTQRPASAREGRALQKGQQTKAAIVDAALG
LATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVVREYHVRFEHEVFYPAMSAPRGLPRLRALFDNWMKRTSIE
IDSGCIYISGAVEFDDRTGPVRDALANSVLTWHAAMKRAIDQCKELGEVGADVESEQMLFEIHGLILALHYEARFLQTPG
SLGRATAGFDNILARYAARPAG
>Mature_341_residues
PRQGEADRAELLGVGVNRHGFRLIRLGGRQREDRVCDLFAQHPGEVAIVGKLVHRRDSGAESFKPQCQRERYAAPKRPLK
RAKACGAQSVFTPNSFQPPGQGWLPPFFCCKIARSFVLFLAAVPPTVSSKTQRPASAREGRALQKGQQTKAAIVDAALGL
ATHIGLEGLSIGALADVTGMSKSGVFAHFGSREELQISVVREYHVRFEHEVFYPAMSAPRGLPRLRALFDNWMKRTSIEI
DSGCIYISGAVEFDDRTGPVRDALANSVLTWHAAMKRAIDQCKELGEVGADVESEQMLFEIHGLILALHYEARFLQTPGS
LGRATAGFDNILARYAARPAG

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37476; Mature: 37345

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRQGEADRAELLGVGVNRHGFRLIRLGGRQREDRVCDLFAQHPGEVAIVGKLVHRRDSG
CCCCCCCCHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHCCCC
AESFKPQCQRERYAAPKRPLKRAKACGAQSVFTPNSFQPPGQGWLPPFFCCKIARSFVLF
CHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LAAVPPTVSSKTQRPASAREGRALQKGQQTKAAIVDAALGLATHIGLEGLSIGALADVTG
HHHCCCCCCCCCCCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
MSKSGVFAHFGSREELQISVVREYHVRFEHEVFYPAMSAPRGLPRLRALFDNWMKRTSIE
CCCCCCEEECCCCCCEEHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCEE
IDSGCIYISGAVEFDDRTGPVRDALANSVLTWHAAMKRAIDQCKELGEVGADVESEQMLF
ECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EIHGLILALHYEARFLQTPGSLGRATAGFDNILARYAARPAG
HHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHCCCCC
>Mature Secondary Structure 
PRQGEADRAELLGVGVNRHGFRLIRLGGRQREDRVCDLFAQHPGEVAIVGKLVHRRDSG
CCCCCCCHHHHEECCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCEEHHHHHHHHCCCC
AESFKPQCQRERYAAPKRPLKRAKACGAQSVFTPNSFQPPGQGWLPPFFCCKIARSFVLF
CHHCCHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
LAAVPPTVSSKTQRPASAREGRALQKGQQTKAAIVDAALGLATHIGLEGLSIGALADVTG
HHHCCCCCCCCCCCCCCHHCCHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHCC
MSKSGVFAHFGSREELQISVVREYHVRFEHEVFYPAMSAPRGLPRLRALFDNWMKRTSIE
CCCCCCEEECCCCCCEEHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHHCEE
IDSGCIYISGAVEFDDRTGPVRDALANSVLTWHAAMKRAIDQCKELGEVGADVESEQMLF
ECCCEEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
EIHGLILALHYEARFLQTPGSLGRATAGFDNILARYAARPAG
HHHHHHHHHHHHHHHCCCCCCCCCHHCCHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA