Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is gltI [H]
Identifier: 120612711
GI number: 120612711
Start: 4525669
End: 4526613
Strand: Reverse
Name: gltI [H]
Synonym: Aave_4074
Alternate gene names: 120612711
Gene position: 4526613-4525669 (Counterclockwise)
Preceding gene: 120612712
Following gene: 120612710
Centisome position: 84.57
GC content: 65.08
Gene sequence:
>945_bases ATGCCCGTCTGGCGCGGTTTTTGCGTCGGTCCGTACTCCATTCCGAGACAAACCATGAATCCTGTACGCCCGTGGCGCGC CCTTCTGGGGGCCGCCTCACTCTGCTGTGCCGTGGCTTCCCATGCGGGGGTGCTGGAGCGCATCGCTTCGGGCGGCAAGC TGGTCGTGGCATACCGGGATGCGGCTTCTCCCTTCGCCTTCAAGGATGCAGCAGGGCGTCCCGCCGGCTATGCCGTCGAA CTCTGCCAGCGCGTGGCGGAAGCGGTGCGCCGAAAGACCGGTCGCAAGGGCATGGAGATCGCGTACGTGCCGGTGGACCT CGGCAACCGGATGGAGGCCATCACCCAGGGTGGAGCCGATTTGGAGTGCGGCTCCAGCACGAATAATGCGGAGCGCCGCC AAAACGTCGCGTTCACCATTCCGCACTTCATCACCGGCACCCGACTGCTCGTCAAGGCGTCGAGCCCGATCGAACGCATC GAGGACATGGGTGGGCACAAGCTGGTTTCCACCCGCGGCACGACCGCGCTGCGGGCCGTGCAGCAGCTCAACCGCGAGCA TGCCCTGCAGATCAACGTGATCGAGGCGCCGGACGACCAGCGGGCCGTGGAGATGGTGGAAAAGGGCGAGGCCGACGCTT TCGCGATGGACGACGTCCTGCTCTACGCATTCGCCGCGGGCCGCCCGGACCCGAAGGCGCTGAAGGTGGTCGGCAAGTTC GTCACGGCCGAAGCGCTGGCGATCATGCTGCCCAAGGACGATCCGGAGTTCAAGAAGGTGGTGGACGACGAGATGCGCCG GCTCATCAGCAGCCGCGAGATCCATCCCATCTACGACAGGTGGTTCCTCCAGCCTGCTCCCCCCACGAACCGGGCACTGA ACTTGCCTGTCAGCTATCTGCTGCGTGAGTTCTGGAAATACCCGTCGGACCAGGTTCCGTTCTGA
Upstream 100 bases:
>100_bases GCATGATGTAATCCTGCAATCGGCATTGGAAAGAGGTGGGGGACAGGACTTACAGTCCCGACCGGCTCCAGGTGGCAGTT ACGGAACTGCCGCAAAAGAG
Downstream 100 bases:
>100_bases CGCGGGCCGCCGGCACGCGCGTTTACCCCATTCGGGATATTCCCTGCAACGGCAGATGCCTTGCGCGCGTCTATCTAGAA TGCCTCTTCCCTTGTATCCA
Product: extracellular solute-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 313
Protein sequence:
>314_residues MPVWRGFCVGPYSIPRQTMNPVRPWRALLGAASLCCAVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVE LCQRVAEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAERRQNVAFTIPHFITGTRLLVKASSPIERI EDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVEMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKF VTAEALAIMLPKDDPEFKKVVDDEMRRLISSREIHPIYDRWFLQPAPPTNRALNLPVSYLLREFWKYPSDQVPF
Sequences:
>Translated_314_residues MPVWRGFCVGPYSIPRQTMNPVRPWRALLGAASLCCAVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVE LCQRVAEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAERRQNVAFTIPHFITGTRLLVKASSPIERI EDMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVEMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKF VTAEALAIMLPKDDPEFKKVVDDEMRRLISSREIHPIYDRWFLQPAPPTNRALNLPVSYLLREFWKYPSDQVPF >Mature_313_residues PVWRGFCVGPYSIPRQTMNPVRPWRALLGAASLCCAVASHAGVLERIASGGKLVVAYRDAASPFAFKDAAGRPAGYAVEL CQRVAEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGADLECGSSTNNAERRQNVAFTIPHFITGTRLLVKASSPIERIE DMGGHKLVSTRGTTALRAVQQLNREHALQINVIEAPDDQRAVEMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKFV TAEALAIMLPKDDPEFKKVVDDEMRRLISSREIHPIYDRWFLQPAPPTNRALNLPVSYLLREFWKYPSDQVPF
Specific function: Part of the binding-protein-dependent transport system for glutamate and aspartate. Binds to both aspartate and glutamate [H]
COG id: COG0834
COG function: function code ET; ABC-type amino acid transport/signal transduction systems, periplasmic component/domain
Gene ontology:
Cell location: Periplasm [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1786876, Length=270, Percent_Identity=34.4444444444444, Blast_Score=191, Evalue=4e-50, Organism=Escherichia coli, GI1787031, Length=257, Percent_Identity=24.9027237354086, Blast_Score=70, Evalue=2e-13, Organism=Escherichia coli, GI1788228, Length=265, Percent_Identity=22.6415094339623, Blast_Score=68, Evalue=6e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 34646; Mature: 34515
Theoretical pI: Translated: 8.93; Mature: 8.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPVWRGFCVGPYSIPRQTMNPVRPWRALLGAASLCCAVASHAGVLERIASGGKLVVAYRD CCCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC AASPFAFKDAAGRPAGYAVELCQRVAEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGAD CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCC LECGSSTNNAERRQNVAFTIPHFITGTRLLVKASSPIERIEDMGGHKLVSTRGTTALRAV CCCCCCCCCHHHHCCCEEECCHHHCCCEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHH QQLNREHALQINVIEAPDDQRAVEMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKF HHHCHHHCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH VTAEALAIMLPKDDPEFKKVVDDEMRRLISSREIHPIYDRWFLQPAPPTNRALNLPVSYL HHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEECCHHHH LREFWKYPSDQVPF HHHHHCCCCCCCCC >Mature Secondary Structure PVWRGFCVGPYSIPRQTMNPVRPWRALLGAASLCCAVASHAGVLERIASGGKLVVAYRD CCCCCEECCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEC AASPFAFKDAAGRPAGYAVELCQRVAEAVRRKTGRKGMEIAYVPVDLGNRMEAITQGGAD CCCCCEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHCCCCC LECGSSTNNAERRQNVAFTIPHFITGTRLLVKASSPIERIEDMGGHKLVSTRGTTALRAV CCCCCCCCCHHHHCCCEEECCHHHCCCEEEEECCCHHHHHHHCCCCEEEECCCHHHHHHH QQLNREHALQINVIEAPDDQRAVEMVEKGEADAFAMDDVLLYAFAAGRPDPKALKVVGKF HHHCHHHCEEEEEEECCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH VTAEALAIMLPKDDPEFKKVVDDEMRRLISSREIHPIYDRWFLQPAPPTNRALNLPVSYL HHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCEEECCHHHH LREFWKYPSDQVPF HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 10493123; 1091635; 1091636 [H]