Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612702
Identifier: 120612702
GI number: 120612702
Start: 4516786
End: 4517802
Strand: Direct
Name: 120612702
Synonym: Aave_4065
Alternate gene names: NA
Gene position: 4516786-4517802 (Clockwise)
Preceding gene: 120612701
Following gene: 120612703
Centisome position: 84.38
GC content: 65.09
Gene sequence:
>1017_bases ATGACGCAGGCACGCAGCACGATGTCCATCGCGGTGGCGATTCCCTGCTACAAGGTGACCCAGCACGTGCTGGAGGTGAT CCGCGCGGTACCGGCGTCGGTGGCGCGCATCTATGCGGTGGACGATGCATGCCCCGAGGGCAGTGGAGCCTTCATCCAGG CGAACTGCACCGACCCCCGCGTGCAGGTGCTCTTCAATCCGGAAAACCGGGGTGTCGGAGGAGCGGTCGTGACGGCCTAT CAGCAGGCGATCGCCGACGGCATGGACATCGTGGTGAAGATCGACGGTGACGGGCAGATGGACCCGGCCCTGTTGCCGCA GTTCGTGCGCCCGATCATCGCGGGCCGCGCCGACTACACTAAAGGCAATCGTTTCTTCCGGCCGGAATCGGTGCGCGGCA TGCCCCCGGTGCGGCTTTTCGGCAATGCGGTGCTGTCGTTCATGACCAAGCTGAGCTGCGGTTACTGGACCATCATGGAC CCGACGAACGGGTACACCGCAGTCCATACCAGCGTGCTCAGGGAGCTGCCGCTCGACAAGCTCGAGCGGCGCTACTTCTT CGAGACGGACATGCTGTTCCGCCTCAACACGCTGCGCGCCGTCGTGCGCGACGTGCCGATGGATTCCGTGTACGCGGACG AGGAGTCGAATCTGAAGATCGGCAGCGTGCTGCCGGAATTCCTGAAGAAGCACGCCTCCCGGCTCCTGCGCCGCTACGCC TACAGCTATTTCGTGCGCGACTTCAACGCAGGTTCGATCTACAGCATCTTCGGGTTGCTGCTGCTGGCCTGGGGCAGTCT TTTCGGCGCGCGGCAATGGATCCACAGCGCCCTGGGAGACCAGCCGGCCACCAGCGGCACGGTCATGCTGGCCGCGCTTC CCGTCATGGTGGGTATCCAGTTCCTGGTGGCCTTCCTGCACCACGACGTGAGCAGCGTGCCGACGGAACCACTGAGCCCG CAACTGGCGGACGAGCGCGAGCCGGGTATGGCCCGCCATCCCGAGGCCCTGCCGTGA
Upstream 100 bases:
>100_bases CCATGGGCTGGCTGTTCCTCGGCGAACCGCTGCACCTGCAGACGTTCGTCGGCGGCGCATTGATTCTCGCCGGCATCGCC GTGGCCGGGAGGGCCGGGGC
Downstream 100 bases:
>100_bases CGCGCATGTCTTCCGCGGTCCCGGCGCCCGCAGAAGATGCATCGCCCACACTGCCCTGGATATTCTGCGGCCTGGTGCTG CCGATGATCCTCTATGCGGC
Product: glycosyl transferase family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MTQARSTMSIAVAIPCYKVTQHVLEVIRAVPASVARIYAVDDACPEGSGAFIQANCTDPRVQVLFNPENRGVGGAVVTAY QQAIADGMDIVVKIDGDGQMDPALLPQFVRPIIAGRADYTKGNRFFRPESVRGMPPVRLFGNAVLSFMTKLSCGYWTIMD PTNGYTAVHTSVLRELPLDKLERRYFFETDMLFRLNTLRAVVRDVPMDSVYADEESNLKIGSVLPEFLKKHASRLLRRYA YSYFVRDFNAGSIYSIFGLLLLAWGSLFGARQWIHSALGDQPATSGTVMLAALPVMVGIQFLVAFLHHDVSSVPTEPLSP QLADEREPGMARHPEALP
Sequences:
>Translated_338_residues MTQARSTMSIAVAIPCYKVTQHVLEVIRAVPASVARIYAVDDACPEGSGAFIQANCTDPRVQVLFNPENRGVGGAVVTAY QQAIADGMDIVVKIDGDGQMDPALLPQFVRPIIAGRADYTKGNRFFRPESVRGMPPVRLFGNAVLSFMTKLSCGYWTIMD PTNGYTAVHTSVLRELPLDKLERRYFFETDMLFRLNTLRAVVRDVPMDSVYADEESNLKIGSVLPEFLKKHASRLLRRYA YSYFVRDFNAGSIYSIFGLLLLAWGSLFGARQWIHSALGDQPATSGTVMLAALPVMVGIQFLVAFLHHDVSSVPTEPLSP QLADEREPGMARHPEALP >Mature_337_residues TQARSTMSIAVAIPCYKVTQHVLEVIRAVPASVARIYAVDDACPEGSGAFIQANCTDPRVQVLFNPENRGVGGAVVTAYQ QAIADGMDIVVKIDGDGQMDPALLPQFVRPIIAGRADYTKGNRFFRPESVRGMPPVRLFGNAVLSFMTKLSCGYWTIMDP TNGYTAVHTSVLRELPLDKLERRYFFETDMLFRLNTLRAVVRDVPMDSVYADEESNLKIGSVLPEFLKKHASRLLRRYAY SYFVRDFNAGSIYSIFGLLLLAWGSLFGARQWIHSALGDQPATSGTVMLAALPVMVGIQFLVAFLHHDVSSVPTEPLSPQ LADEREPGMARHPEALP
Specific function: Unknown
COG id: COG0463
COG function: function code M; Glycosyltransferases involved in cell wall biogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001173 [H]
Pfam domain/function: PF00535 Glycos_transf_2 [H]
EC number: NA
Molecular weight: Translated: 37330; Mature: 37198
Theoretical pI: Translated: 7.18; Mature: 7.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQARSTMSIAVAIPCYKVTQHVLEVIRAVPASVARIYAVDDACPEGSGAFIQANCTDPR CCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCCE VQVLFNPENRGVGGAVVTAYQQAIADGMDIVVKIDGDGQMDPALLPQFVRPIIAGRADYT EEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC KGNRFFRPESVRGMPPVRLFGNAVLSFMTKLSCGYWTIMDPTNGYTAVHTSVLRELPLDK CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHH LERRYFFETDMLFRLNTLRAVVRDVPMDSVYADEESNLKIGSVLPEFLKKHASRLLRRYA HHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH YSYFVRDFNAGSIYSIFGLLLLAWGSLFGARQWIHSALGDQPATSGTVMLAALPVMVGIQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FLVAFLHHDVSSVPTEPLSPQLADEREPGMARHPEALP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TQARSTMSIAVAIPCYKVTQHVLEVIRAVPASVARIYAVDDACPEGSGAFIQANCTDPR CCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEEECCCCCE VQVLFNPENRGVGGAVVTAYQQAIADGMDIVVKIDGDGQMDPALLPQFVRPIIAGRADYT EEEEECCCCCCCCHHHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCC KGNRFFRPESVRGMPPVRLFGNAVLSFMTKLSCGYWTIMDPTNGYTAVHTSVLRELPLDK CCCCEECCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHCCHHH LERRYFFETDMLFRLNTLRAVVRDVPMDSVYADEESNLKIGSVLPEFLKKHASRLLRRYA HHHHHHHCHHHHHHHHHHHHHHHHCCCCHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHH YSYFVRDFNAGSIYSIFGLLLLAWGSLFGARQWIHSALGDQPATSGTVMLAALPVMVGIQ HHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH FLVAFLHHDVSSVPTEPLSPQLADEREPGMARHPEALP HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]