Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612655
Identifier: 120612655
GI number: 120612655
Start: 4466671
End: 4467186
Strand: Direct
Name: 120612655
Synonym: Aave_4018
Alternate gene names: NA
Gene position: 4466671-4467186 (Clockwise)
Preceding gene: 120612654
Following gene: 120612659
Centisome position: 83.45
GC content: 73.26
Gene sequence:
>516_bases ATGACCACCGCCACCATCCACATAGATGCCACCCCGCCGGGACCGCGCGCCCGCGCCGATGCCGCGAACATTCCCGGCTG GGGCGCGGACCTGCGCCGCGAGGACCGCCCCGCCGTGCCGCGCGAGCGCACACCGCCGCGCATCGACGTGCCGTGGGACA AGCCCGCGGCCCAGATCCCCACGGTGGAAGTGCTGCACTCCATCGAGCGCCCCGGGCTCACGCCGGTTTTCGGCACCACC GTGCCTCCCTCGGGCGCGAGCGGCATGCTGCGCCGGCTGGCCTTCCGCCTGAGCGAGAGCGACGTGCGCCACTGGCTGCT GCTGTTGGTGGCCGACCGCATCAACGTGCTCGAAGGCCTGGTGCACGACCTGATGCATGGCCGCGTGCCCCAGGTGGTGC AGGAGATGGGATTGAACGCGCACTGGCGCCAGCACCGCGAGCGGGCGCTGCGCGCCGTGGCCGTGCTCGCCGGACTGGCG CTGGCGCTGATCGCGCTGGTGCGGCGGCTGTTCTGA
Upstream 100 bases:
>100_bases CACCTTCTCGAGCAAGCTGGACGGCTGCATCAAGCCCGTGATCGTGCCCTCCGCCGCCTGAGCTCGCCCTCCGAAGCCGC TACCCCGAAAGGACACCCGC
Downstream 100 bases:
>100_bases CCGTGCCGCGGCAACGACGGCGGCACCACATGCCGCCGACGCTGCCGCCGACTTCGTCAGAGGTTCAGCGCACTTCGGAA ACGAATTCCTCCCGCGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTTATIHIDATPPGPRARADAANIPGWGADLRREDRPAVPRERTPPRIDVPWDKPAAQIPTVEVLHSIERPGLTPVFGTT VPPSGASGMLRRLAFRLSESDVRHWLLLLVADRINVLEGLVHDLMHGRVPQVVQEMGLNAHWRQHRERALRAVAVLAGLA LALIALVRRLF
Sequences:
>Translated_171_residues MTTATIHIDATPPGPRARADAANIPGWGADLRREDRPAVPRERTPPRIDVPWDKPAAQIPTVEVLHSIERPGLTPVFGTT VPPSGASGMLRRLAFRLSESDVRHWLLLLVADRINVLEGLVHDLMHGRVPQVVQEMGLNAHWRQHRERALRAVAVLAGLA LALIALVRRLF >Mature_170_residues TTATIHIDATPPGPRARADAANIPGWGADLRREDRPAVPRERTPPRIDVPWDKPAAQIPTVEVLHSIERPGLTPVFGTTV PPSGASGMLRRLAFRLSESDVRHWLLLLVADRINVLEGLVHDLMHGRVPQVVQEMGLNAHWRQHRERALRAVAVLAGLAL ALIALVRRLF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18908; Mature: 18777
Theoretical pI: Translated: 11.74; Mature: 11.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTATIHIDATPPGPRARADAANIPGWGADLRREDRPAVPRERTPPRIDVPWDKPAAQIP CCEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCCCC TVEVLHSIERPGLTPVFGTTVPPSGASGMLRRLAFRLSESDVRHWLLLLVADRINVLEGL HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHDLMHGRVPQVVQEMGLNAHWRQHRERALRAVAVLAGLALALIALVRRLF HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure TTATIHIDATPPGPRARADAANIPGWGADLRREDRPAVPRERTPPRIDVPWDKPAAQIP CEEEEEEECCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEECCCCCCCCCCC TVEVLHSIERPGLTPVFGTTVPPSGASGMLRRLAFRLSESDVRHWLLLLVADRINVLEGL HHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VHDLMHGRVPQVVQEMGLNAHWRQHRERALRAVAVLAGLALALIALVRRLF HHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA