Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is ywbO [H]
Identifier: 120612625
GI number: 120612625
Start: 4421172
End: 4421858
Strand: Reverse
Name: ywbO [H]
Synonym: Aave_3987
Alternate gene names: 120612625
Gene position: 4421858-4421172 (Counterclockwise)
Preceding gene: 120612628
Following gene: 120612622
Centisome position: 82.61
GC content: 70.89
Gene sequence:
>687_bases ATGACCGCCGCCGTGCCTCCGCCGTCTTCCCCCGCCGCCCCGCTGCGCATCGACTTCGTCTCCGACATCTCGTGCCCCTG GTGCGCCATCGGTCTGCAGTCGCTCGGCCAGGCGCTGGAGGCGCTCGATGGCACCGTCCAGGCGGAAGTGCATTTCCAGC CGTTTGAACTCAATCCCGGGATGCCGCCCGGCGGCCAGGACATCGGCGAACACCTCGCGGAAAAGTACGGCGCCTCCGCC GAGCAGACCGCGCAGACGCAGCGCGCCATCGCGGAGCGCGGCGCGGCACTCGGTTTCGAATTCCGCATGGACCGCCGCGG CCGCATCTACAACACCTTCGACGCGCACCGGCTGCTGCACTGGGCGCACGAGGTGGCCGGCCCGCAGGCGCAGGAAGCGC TCAAGCGGGCCCTGTTCCATGCCTACTTCACCGAGGGGCGCGATCCTGGCGACCGCGCCCTGCTCGTGGAACTGGCCGCC GGAGCGGGCCTGGACGCTGCGCGCGCGCAGCAGGTGCTCGATGCCGGTGAGTATGCGGACGCGGTGCGCGAGCGCGAATC CTTCTACCAGCAGCACGGCATCCATTCCGTGCCGGCCGTCATCGTGAACGGACGGCACCTGATCCAGGGCGGCCAGCCGC CGGAGGTGTTCGAGCAGGCCCTGCGGCAGATCGCCGCAGGGGGGTGA
Upstream 100 bases:
>100_bases ATGGTATGGACCACATGGCGTCTTTGCCGCGGTCCTGCAAGGGCTCTCGCGTCCTGCCATGCTCCTGCGTATCCCACGTT TCCTCCAAGGAGATCCATCC
Downstream 100 bases:
>100_bases GCCGGAGTGCCCGGCTGGCCAGCTGGTACTGGCGTGCGTGGACGGCGTTCCTGGCGTCCACGTCGATCCGTTCGGGACGT GCACGCCTTCCTTAAGGCTG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTAAVPPPSSPAAPLRIDFVSDISCPWCAIGLQSLGQALEALDGTVQAEVHFQPFELNPGMPPGGQDIGEHLAEKYGASA EQTAQTQRAIAERGAALGFEFRMDRRGRIYNTFDAHRLLHWAHEVAGPQAQEALKRALFHAYFTEGRDPGDRALLVELAA GAGLDAARAQQVLDAGEYADAVRERESFYQQHGIHSVPAVIVNGRHLIQGGQPPEVFEQALRQIAAGG
Sequences:
>Translated_228_residues MTAAVPPPSSPAAPLRIDFVSDISCPWCAIGLQSLGQALEALDGTVQAEVHFQPFELNPGMPPGGQDIGEHLAEKYGASA EQTAQTQRAIAERGAALGFEFRMDRRGRIYNTFDAHRLLHWAHEVAGPQAQEALKRALFHAYFTEGRDPGDRALLVELAA GAGLDAARAQQVLDAGEYADAVRERESFYQQHGIHSVPAVIVNGRHLIQGGQPPEVFEQALRQIAAGG >Mature_227_residues TAAVPPPSSPAAPLRIDFVSDISCPWCAIGLQSLGQALEALDGTVQAEVHFQPFELNPGMPPGGQDIGEHLAEKYGASAE QTAQTQRAIAERGAALGFEFRMDRRGRIYNTFDAHRLLHWAHEVAGPQAQEALKRALFHAYFTEGRDPGDRALLVELAAG AGLDAARAQQVLDAGEYADAVRERESFYQQHGIHSVPAVIVNGRHLIQGGQPPEVFEQALRQIAAGG
Specific function: Unknown
COG id: COG2761
COG function: function code Q; Predicted dithiol-disulfide isomerase involved in polyketide biosynthesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA [H]
EC number: NA
Molecular weight: Translated: 24551; Mature: 24420
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAVPPPSSPAAPLRIDFVSDISCPWCAIGLQSLGQALEALDGTVQAEVHFQPFELNPG CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC MPPGGQDIGEHLAEKYGASAEQTAQTQRAIAERGAALGFEFRMDRRGRIYNTFDAHRLLH CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECHHHHHHHHH WAHEVAGPQAQEALKRALFHAYFTEGRDPGDRALLVELAAGAGLDAARAQQVLDAGEYAD HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHCCCCCCHHHHHHHHHHHHHHH AVRERESFYQQHGIHSVPAVIVNGRHLIQGGQPPEVFEQALRQIAAGG HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TAAVPPPSSPAAPLRIDFVSDISCPWCAIGLQSLGQALEALDGTVQAEVHFQPFELNPG CCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEEECCCC MPPGGQDIGEHLAEKYGASAEQTAQTQRAIAERGAALGFEFRMDRRGRIYNTFDAHRLLH CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEECHHHHHHHHH WAHEVAGPQAQEALKRALFHAYFTEGRDPGDRALLVELAAGAGLDAARAQQVLDAGEYAD HHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCEEHEEHHCCCCCCHHHHHHHHHHHHHHH AVRERESFYQQHGIHSVPAVIVNGRHLIQGGQPPEVFEQALRQIAAGG HHHHHHHHHHHCCCCCCCEEEECCCCEECCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7934828; 9384377 [H]