Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is 120612611
Identifier: 120612611
GI number: 120612611
Start: 4402765
End: 4403262
Strand: Reverse
Name: 120612611
Synonym: Aave_3972
Alternate gene names: NA
Gene position: 4403262-4402765 (Counterclockwise)
Preceding gene: 120612616
Following gene: 120612608
Centisome position: 82.26
GC content: 71.69
Gene sequence:
>498_bases ATGGGATTCTTCAGCCGACTGTTCCCGCCCCGGGCAGACGGCCGTCCCGTGCCCGATGACTGGACCTCGCTGCCCGACAG CCAGGCCAGCGAACTGGTGCTGATGGGCGACGAGGCCGCCAAGCTGCTGGCCGAGATCGACATCGACGCCGCCATCGCCG CCCAGGAGCGCTGGGTGCCCTGGCTGGAGCAGGTACTGCTGCGCGGCGCAAGCGACGAACGCCTGCGCCCCGAGGCCATC CGCGACGACACCTGCTCCGAACTCGGCCAGTGGCTGCGCGGCCCCGGCCGCATCGCCCTGGGGCATTTCCCGGCCTTCCA CATGATGGCCCGCCGCCACCGCTACTTCCACCAGCAGGCCGCCGACGTGGTGCTGCATGCCGAGGCCGGCGACGGGCGCC AGGCCCAACAGGCCTTCAAGGGCTGTCGCCATGCGTCGCGGCAGGTGGTGATGCTGCTGCAGGAACTGAAACGGGGCCTG GCCCGGGCGGCGCGCTAG
Upstream 100 bases:
>100_bases TTGATTGCTTGAATTTATCGTTTAGAGAAATTCAATTGTTCAAATAAAATACCCGTTCGCTCTTTTCCTTCTTCCGCCGC TCCGATCGCGCTCACACACC
Downstream 100 bases:
>100_bases AAGCCGCCGGACGGTCGGAAGGCCGACGGGCCAATCCCGGCGTGCCGCGGCCGCGGTTCAGCGCCGCTGGCGCATGGGCA TGCGGTCGATCTCGGCGAAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MGFFSRLFPPRADGRPVPDDWTSLPDSQASELVLMGDEAAKLLAEIDIDAAIAAQERWVPWLEQVLLRGASDERLRPEAI RDDTCSELGQWLRGPGRIALGHFPAFHMMARRHRYFHQQAADVVLHAEAGDGRQAQQAFKGCRHASRQVVMLLQELKRGL ARAAR
Sequences:
>Translated_165_residues MGFFSRLFPPRADGRPVPDDWTSLPDSQASELVLMGDEAAKLLAEIDIDAAIAAQERWVPWLEQVLLRGASDERLRPEAI RDDTCSELGQWLRGPGRIALGHFPAFHMMARRHRYFHQQAADVVLHAEAGDGRQAQQAFKGCRHASRQVVMLLQELKRGL ARAAR >Mature_164_residues GFFSRLFPPRADGRPVPDDWTSLPDSQASELVLMGDEAAKLLAEIDIDAAIAAQERWVPWLEQVLLRGASDERLRPEAIR DDTCSELGQWLRGPGRIALGHFPAFHMMARRHRYFHQQAADVVLHAEAGDGRQAQQAFKGCRHASRQVVMLLQELKRGLA RAAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18547; Mature: 18416
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGFFSRLFPPRADGRPVPDDWTSLPDSQASELVLMGDEAAKLLAEIDIDAAIAAQERWVP CCCHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHCHHHHHHHHHHHHH WLEQVLLRGASDERLRPEAIRDDTCSELGQWLRGPGRIALGHFPAFHMMARRHRYFHQQA HHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH ADVVLHAEAGDGRQAQQAFKGCRHASRQVVMLLQELKRGLARAAR HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure GFFSRLFPPRADGRPVPDDWTSLPDSQASELVLMGDEAAKLLAEIDIDAAIAAQERWVP CCHHHCCCCCCCCCCCCCHHHCCCCCCCCCEEEECHHHHHHHHHHCHHHHHHHHHHHHH WLEQVLLRGASDERLRPEAIRDDTCSELGQWLRGPGRIALGHFPAFHMMARRHRYFHQQA HHHHHHHCCCCCCCCCCHHHCCHHHHHHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHH ADVVLHAEAGDGRQAQQAFKGCRHASRQVVMLLQELKRGLARAAR HHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA