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The map label for this gene is feaR [H]

Identifier: 120612608

GI number: 120612608

Start: 4398280

End: 4399272

Strand: Reverse

Name: feaR [H]

Synonym: Aave_3969

Alternate gene names: 120612608

Gene position: 4399272-4398280 (Counterclockwise)

Preceding gene: 120612611

Following gene: 120612605

Centisome position: 82.19

GC content: 61.63

Gene sequence:

>993_bases
ATGCAGAGCACATCCACCCGATGGAGCAGCGAACAGATTCCCCTCGGTGAGCGGACCGATGCTTGGGAGGATGTACTGAG
CGATAGCTATCGGCGGTGGCAGGTCCCCCGGCGATTGCCGGCGACGTTCTTCGCCCACGTGCGCAAGCACGATTTTGCGG
GAGCCGGAATTGTCGAAACCGTGTGTGATCCCTGTGCAGGAAGACGCACACAGAGCCATGTGAAGCAAGACGACGAACTC
TACGTAGGCATCCAGCTCACAACCGCCGGGCGTGAGCGATTCAGGATCGGCGACGCAGTCGTAGACGTGGCTTCAGGGGA
TCTGGTGGTGTGGACCACTGGCCAGGCAGTCGAGTTCGAGGTCATGGAACGCCTGCACAAGGTCACGCTGATGATCCCCT
GGGCGCAGATGAGGGAGCGTCTGCCGGAGCGCAGGCAACCGCCCGTCGGTGGCAAGATCGAGAGCCGAACGGGTGTCGGG
TCGCTGCTTGCCGTTCACCTGCTTGCGCTATCCCATGAAATCGGCGGTCTTGACGAGCGGGTGCATGGCTCCGTCAGCCG
GTCGACGCTCGAGTTGATCGGCATTGCCCTCTCGGACCAGCAGCCTGCCGGCAGCTTTGATGCGAGCGGCGCAATGAGGT
ATCGCGTTCAGGACTACATCCTGCAGCACCTCCACGAAGAAGATCTGAACCCGAGCCGGATTGCGCTGGCGAACCGCATC
TCGCTCCGCTACCTGCACATGCTGTTCCAGCGAAACGATATGACCGTTTCGAGCTTCATACTCAACAACCGGCTGCGCGC
CTGCAAGCAGGCCCTGAGCGATCCGGCGTTTGCGCGGTTGCAGATATCCGAGATCGCCTACCGGTGGGGCTTCAACTCGA
TGAGCCATTTTTGCCGTACCTTCAAGGAGAAGTACGGCAGCTCCCCCGGCGAGGTTCGACGGGAGGCCGCGGGGGCCTAT
ACACGGCGTCGCAGTTCAGACGTAGTGTCCTGA

Upstream 100 bases:

>100_bases
TCAACAAAATGTGTTGGTTTGGCGGACGGCGTACACGGAAAGCGGCCGCAGCAGAGCGGAATTTCAGAGTCGAGCGACAG
CGACCGAGCAGGAGACCACG

Downstream 100 bases:

>100_bases
GCGTTCGAGCACTTCGATCTTGTACCCGTCGGGGTCCTGAATGAAGAAAAAGCGGGCCAGTATGTCCTGGCCTCGCTTGA
ACTCCTTCACCGGCGTCGGG

Product: AraC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MQSTSTRWSSEQIPLGERTDAWEDVLSDSYRRWQVPRRLPATFFAHVRKHDFAGAGIVETVCDPCAGRRTQSHVKQDDEL
YVGIQLTTAGRERFRIGDAVVDVASGDLVVWTTGQAVEFEVMERLHKVTLMIPWAQMRERLPERRQPPVGGKIESRTGVG
SLLAVHLLALSHEIGGLDERVHGSVSRSTLELIGIALSDQQPAGSFDASGAMRYRVQDYILQHLHEEDLNPSRIALANRI
SLRYLHMLFQRNDMTVSSFILNNRLRACKQALSDPAFARLQISEIAYRWGFNSMSHFCRTFKEKYGSSPGEVRREAAGAY
TRRRSSDVVS

Sequences:

>Translated_330_residues
MQSTSTRWSSEQIPLGERTDAWEDVLSDSYRRWQVPRRLPATFFAHVRKHDFAGAGIVETVCDPCAGRRTQSHVKQDDEL
YVGIQLTTAGRERFRIGDAVVDVASGDLVVWTTGQAVEFEVMERLHKVTLMIPWAQMRERLPERRQPPVGGKIESRTGVG
SLLAVHLLALSHEIGGLDERVHGSVSRSTLELIGIALSDQQPAGSFDASGAMRYRVQDYILQHLHEEDLNPSRIALANRI
SLRYLHMLFQRNDMTVSSFILNNRLRACKQALSDPAFARLQISEIAYRWGFNSMSHFCRTFKEKYGSSPGEVRREAAGAY
TRRRSSDVVS
>Mature_330_residues
MQSTSTRWSSEQIPLGERTDAWEDVLSDSYRRWQVPRRLPATFFAHVRKHDFAGAGIVETVCDPCAGRRTQSHVKQDDEL
YVGIQLTTAGRERFRIGDAVVDVASGDLVVWTTGQAVEFEVMERLHKVTLMIPWAQMRERLPERRQPPVGGKIESRTGVG
SLLAVHLLALSHEIGGLDERVHGSVSRSTLELIGIALSDQQPAGSFDASGAMRYRVQDYILQHLHEEDLNPSRIALANRI
SLRYLHMLFQRNDMTVSSFILNNRLRACKQALSDPAFARLQISEIAYRWGFNSMSHFCRTFKEKYGSSPGEVRREAAGAY
TRRRSSDVVS

Specific function: Positive regulator of tynA/maoA and feaB/padA, the genes for 2-phenylethylamine catabolism [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1787649, Length=248, Percent_Identity=23.3870967741935, Blast_Score=71, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR020449
- InterPro:   IPR018060 [H]

Pfam domain/function: PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 37300; Mature: 37300

Theoretical pI: Translated: 8.89; Mature: 8.89

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSTSTRWSSEQIPLGERTDAWEDVLSDSYRRWQVPRRLPATFFAHVRKHDFAGAGIVET
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
VCDPCAGRRTQSHVKQDDELYVGIQLTTAGRERFRIGDAVVDVASGDLVVWTTGQAVEFE
HHCCCCCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEECCCEEEHH
VMERLHKVTLMIPWAQMRERLPERRQPPVGGKIESRTGVGSLLAVHLLALSHEIGGLDER
HHHHHHHHHEEECHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VHGSVSRSTLELIGIALSDQQPAGSFDASGAMRYRVQDYILQHLHEEDLNPSRIALANRI
HHCHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SLRYLHMLFQRNDMTVSSFILNNRLRACKQALSDPAFARLQISEIAYRWGFNSMSHFCRT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
FKEKYGSSPGEVRREAAGAYTRRRSSDVVS
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MQSTSTRWSSEQIPLGERTDAWEDVLSDSYRRWQVPRRLPATFFAHVRKHDFAGAGIVET
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHH
VCDPCAGRRTQSHVKQDDELYVGIQLTTAGRERFRIGDAVVDVASGDLVVWTTGQAVEFE
HHCCCCCCCHHHHCCCCCCEEEEEEEEECCCHHHHHHHHHHEECCCCEEEEECCCEEEHH
VMERLHKVTLMIPWAQMRERLPERRQPPVGGKIESRTGVGSLLAVHLLALSHEIGGLDER
HHHHHHHHHEEECHHHHHHHCHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHH
VHGSVSRSTLELIGIALSDQQPAGSFDASGAMRYRVQDYILQHLHEEDLNPSRIALANRI
HHCHHHHHHHHHHEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
SLRYLHMLFQRNDMTVSSFILNNRLRACKQALSDPAFARLQISEIAYRWGFNSMSHFCRT
HHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHHHHHHH
FKEKYGSSPGEVRREAAGAYTRRRSSDVVS
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631685; 9043126; 9278503; 9109378 [H]