Definition | Acidovorax citrulli AAC00-1 chromosome, complete genome. |
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Accession | NC_008752 |
Length | 5,352,772 |
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The map label for this gene is cls [H]
Identifier: 120612601
GI number: 120612601
Start: 4391057
End: 4392469
Strand: Reverse
Name: cls [H]
Synonym: Aave_3962
Alternate gene names: 120612601
Gene position: 4392469-4391057 (Counterclockwise)
Preceding gene: 120612602
Following gene: 120612597
Centisome position: 82.06
GC content: 74.1
Gene sequence:
>1413_bases TTGACGCGCTTCGCGCTGCTTTCGGGCCTGGGGCATGCGGTTTTCGTGGCCGTGGGCCTGCTGATCTACGTGATGGCCAC GCGCATCGGCCGCCAGCGCCGCCACCCCTCGGCGGCCATGGGCTGGGTGCTGGCGATCGTGGCCTTCCCGTATGCGGCGG TGCCGCTCTTCCTGATGTTCGGCTCGCGCAAGTTCGTGCGTCCGCAGCGGCGCGCCGCCCCCATGCTGGCGGCCGGGCCG GCATCGCTGGTCGCCGGTCCGCTGCCGGCGCCCGGGCCTGCCTGGGCCACGCAACTGCTGGCGGGGCTGGAACTGGCGCC GCCGGTGCGCAATGCGCGCATCGCGTTCCACGGGCAGGGCGCGCAGGCGCTGGAGGCGCTGCTGGCCACGGTGGATTCGG CGCGGCACAGCCTGGACGTCTGCACCTTCGTCTTCGGCGACGACGAGGTGGGCCGGCGCGTGGCCGCGGCGCTGCAGGAG GCCGCTGGCCGGGGCGTGGCGGTGCGGCTGCTGCTGGACGCGGTGGGCAGCCTGGGCATGCCGCCGGAGCTCTCGGCCAC GTTGAAGCAGGGCGGGGTGCAGGTGCGCCGCTTCATGCCGCTGCTGCACAACCCGATGCGCGGCCATACCAACCTGCGCA ACCACCGCAAGATGGTGGTGGCCGATGGCGAGCGGCTCTGGAGCGGTGGCCGCAACCTGGCCTGCGAGTACTTCCTGGAC CGGCCTCGGCTGCCGGCCTGGATCGACCTGAGCTACGAGATCGACGGGCCGATCGCGCTGCAGGCCGCCGCCCAGTTCGC GGCCGACTGGCAGGCGGCGAGCGGGCGCATGGCCCGCGCGGTGCTGCCGCGGCCGCTGCCCCCCGGCCCGCCGGAGGGCG TGCCCGCGCAGTGGGTGCCCAGCGGCCCCGACCATGCGGACGACACGGTGCATGCGCTGCTGGTGGCCGGCGCCTACCAC GCGCGGGAACGCATCGTGGCGGTGACGCCGTATTTCGTGCCGGACGATGCGCTGCTCGATGCCTGGTGCCTGGCCTGCCG CCGCGGCGTGCAGGTGCGCCTGCTGGTGCCCGAGCGCTCCAACCACCGGCTGGCCGACTGGGCACGCGCCCGCGCCCTGC GCGAGCTGGCCCAGGCCGGCGCGGAGGTCTGGCTCGCGCCCGGCATGGTGCATGCCAAGGCCGTGGTGATCGACAACGAC CTCGCGCTGTCGGGCTCGCTCAACCTCGACGCGCGCAGCCTGTTCCTCAACTACGAGGCGATGACGGCCTTCTACGGGCC GGAGGAAGTAGGGTGGCTGGCGGGCTGGTGCGAAGAGCAGTTCGACCGGGCCCGGCGCCTGCATGCCCGCCCGCCGTCGT GGCCGCGGGACATCGCCGAAGGCGTGATCCGGGCGGTCGGGTTCCAGCTGTAG
Upstream 100 bases:
>100_bases CGCCGCGCCTGGGCGGGCTGCGCGTGGCGGTGCGCTTCGCGGTGGCGGCCGGCGTTCCGGCGCTGCCGGGCGGGGGCACG GGGGGCCCGGGGGGCGGCGC
Downstream 100 bases:
>100_bases CCTGGATTCAGCGTGTGAAGCGCGCCAGCGCGGCCTCGTAGTGGTGGCGGTTCCCGTGGTAGCCCGTGCCCGGCGGCCCG TAGGGCTTCGGAGGCGTGCC
Product: cardiolipin synthetase 2
Products: Biphosphatidylglycerol; Glycerol. [C]
Alternate protein names: CL synthase [H]
Number of amino acids: Translated: 470; Mature: 469
Protein sequence:
>470_residues MTRFALLSGLGHAVFVAVGLLIYVMATRIGRQRRHPSAAMGWVLAIVAFPYAAVPLFLMFGSRKFVRPQRRAAPMLAAGP ASLVAGPLPAPGPAWATQLLAGLELAPPVRNARIAFHGQGAQALEALLATVDSARHSLDVCTFVFGDDEVGRRVAAALQE AAGRGVAVRLLLDAVGSLGMPPELSATLKQGGVQVRRFMPLLHNPMRGHTNLRNHRKMVVADGERLWSGGRNLACEYFLD RPRLPAWIDLSYEIDGPIALQAAAQFAADWQAASGRMARAVLPRPLPPGPPEGVPAQWVPSGPDHADDTVHALLVAGAYH ARERIVAVTPYFVPDDALLDAWCLACRRGVQVRLLVPERSNHRLADWARARALRELAQAGAEVWLAPGMVHAKAVVIDND LALSGSLNLDARSLFLNYEAMTAFYGPEEVGWLAGWCEEQFDRARRLHARPPSWPRDIAEGVIRAVGFQL
Sequences:
>Translated_470_residues MTRFALLSGLGHAVFVAVGLLIYVMATRIGRQRRHPSAAMGWVLAIVAFPYAAVPLFLMFGSRKFVRPQRRAAPMLAAGP ASLVAGPLPAPGPAWATQLLAGLELAPPVRNARIAFHGQGAQALEALLATVDSARHSLDVCTFVFGDDEVGRRVAAALQE AAGRGVAVRLLLDAVGSLGMPPELSATLKQGGVQVRRFMPLLHNPMRGHTNLRNHRKMVVADGERLWSGGRNLACEYFLD RPRLPAWIDLSYEIDGPIALQAAAQFAADWQAASGRMARAVLPRPLPPGPPEGVPAQWVPSGPDHADDTVHALLVAGAYH ARERIVAVTPYFVPDDALLDAWCLACRRGVQVRLLVPERSNHRLADWARARALRELAQAGAEVWLAPGMVHAKAVVIDND LALSGSLNLDARSLFLNYEAMTAFYGPEEVGWLAGWCEEQFDRARRLHARPPSWPRDIAEGVIRAVGFQL >Mature_469_residues TRFALLSGLGHAVFVAVGLLIYVMATRIGRQRRHPSAAMGWVLAIVAFPYAAVPLFLMFGSRKFVRPQRRAAPMLAAGPA SLVAGPLPAPGPAWATQLLAGLELAPPVRNARIAFHGQGAQALEALLATVDSARHSLDVCTFVFGDDEVGRRVAAALQEA AGRGVAVRLLLDAVGSLGMPPELSATLKQGGVQVRRFMPLLHNPMRGHTNLRNHRKMVVADGERLWSGGRNLACEYFLDR PRLPAWIDLSYEIDGPIALQAAAQFAADWQAASGRMARAVLPRPLPPGPPEGVPAQWVPSGPDHADDTVHALLVAGAYHA RERIVAVTPYFVPDDALLDAWCLACRRGVQVRLLVPERSNHRLADWARARALRELAQAGAEVWLAPGMVHAKAVVIDNDL ALSGSLNLDARSLFLNYEAMTAFYGPEEVGWLAGWCEEQFDRARRLHARPPSWPRDIAEGVIRAVGFQL
Specific function: Catalyzes the reversible phosphatidyl group transfer from one phosphatidylglycerol molecule to another to form cardiolipin (CL) (diphosphatidylglycerol) and glycerol [H]
COG id: COG1502
COG function: function code I; Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 PLD phosphodiesterase domains [H]
Homologues:
Organism=Escherichia coli, GI1787502, Length=490, Percent_Identity=30.2040816326531, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1787007, Length=316, Percent_Identity=29.4303797468354, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI87081826, Length=364, Percent_Identity=27.1978021978022, Blast_Score=78, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022924 - InterPro: IPR001736 [H]
Pfam domain/function: PF00614 PLDc [H]
EC number: 2.7.8.- [C]
Molecular weight: Translated: 50954; Mature: 50822
Theoretical pI: Translated: 9.65; Mature: 9.65
Prosite motif: PS50035 PLD
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFALLSGLGHAVFVAVGLLIYVMATRIGRQRRHPSAAMGWVLAIVAFPYAAVPLFLMF CCHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GSRKFVRPQRRAAPMLAAGPASLVAGPLPAPGPAWATQLLAGLELAPPVRNARIAFHGQG CCCHHCCCHHHCCCCEECCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC AQALEALLATVDSARHSLDVCTFVFGDDEVGRRVAAALQEAAGRGVAVRLLLDAVGSLGM HHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PPELSATLKQGGVQVRRFMPLLHNPMRGHTNLRNHRKMVVADGERLWSGGRNLACEYFLD CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHEECC RPRLPAWIDLSYEIDGPIALQAAAQFAADWQAASGRMARAVLPRPLPPGPPEGVPAQWVP CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC SGPDHADDTVHALLVAGAYHARERIVAVTPYFVPDDALLDAWCLACRRGVQVRLLVPERS CCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC NHRLADWARARALRELAQAGAEVWLAPGMVHAKAVVIDNDLALSGSLNLDARSLFLNYEA CCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCEEECCCCCCCHHHHEEEHHH MTAFYGPEEVGWLAGWCEEQFDRARRLHARPPSWPRDIAEGVIRAVGFQL HHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TRFALLSGLGHAVFVAVGLLIYVMATRIGRQRRHPSAAMGWVLAIVAFPYAAVPLFLMF CHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GSRKFVRPQRRAAPMLAAGPASLVAGPLPAPGPAWATQLLAGLELAPPVRNARIAFHGQG CCCHHCCCHHHCCCCEECCCHHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCEEEEECCC AQALEALLATVDSARHSLDVCTFVFGDDEVGRRVAAALQEAAGRGVAVRLLLDAVGSLGM HHHHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCC PPELSATLKQGGVQVRRFMPLLHNPMRGHTNLRNHRKMVVADGERLWSGGRNLACEYFLD CCCHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCCEEEEECCHHHHCCCCCEEEHEECC RPRLPAWIDLSYEIDGPIALQAAAQFAADWQAASGRMARAVLPRPLPPGPPEGVPAQWVP CCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCCCCCCC SGPDHADDTVHALLVAGAYHARERIVAVTPYFVPDDALLDAWCLACRRGVQVRLLVPERS CCCCCCHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHHHHCCCEEEEECCCCC NHRLADWARARALRELAQAGAEVWLAPGMVHAKAVVIDNDLALSGSLNLDARSLFLNYEA CCCHHHHHHHHHHHHHHHCCCCEEECCCCEEEEEEEEECCEEECCCCCCCHHHHEEEHHH MTAFYGPEEVGWLAGWCEEQFDRARRLHARPPSWPRDIAEGVIRAVGFQL HHEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Phosphatidylglycerol [C]
Specific reaction: 2 Phosphatidylglycerol = Biphosphatidylglycerol + Glycerol. [C]
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA